RNA–Protein interactions for RNA: ENST00000462047.1

PPP2R1A-204, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 2

Gene PPP2R1A, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-204ENST00000462047 TJP1Q07157 1748 aa22.58■■□□□ 1.21
PPP2R1A-204ENST00000462047 A0A087WZG4 1122 aa22.58■■□□□ 1.21
PPP2R1A-204ENST00000462047 ZBTB1Q9Y2K1 713 aa22.58■■□□□ 1.21
PPP2R1A-204ENST00000462047 CANXP27824 592 aaKnown RBP22.57■■□□□ 1.2
PPP2R1A-204ENST00000462047 ZNF790Q6PG37 636 aa22.57■■□□□ 1.2
PPP2R1A-204ENST00000462047 COL15A1P39059 1388 aa22.56■■□□□ 1.2
PPP2R1A-204ENST00000462047 NFIXQ14938 502 aa22.56■■□□□ 1.2
PPP2R1A-204ENST00000462047 N4BP2Q86UW6 1770 aaPredicted RBP22.55■■□□□ 1.2
PPP2R1A-204ENST00000462047 COL3A1P02461 1466 aaPredicted RBP22.55■■□□□ 1.2
PPP2R1A-204ENST00000462047 ZNF496Q96IT1 587 aaPredicted RBP22.55■■□□□ 1.2
PPP2R1A-204ENST00000462047 KCPQ6ZWJ8 1503 aa22.55■■□□□ 1.2
PPP2R1A-204ENST00000462047 CHRNA5P30532 468 aa22.54■■□□□ 1.2
PPP2R1A-204ENST00000462047 EIF5P55010 431 aaKnown RBP22.54■■□□□ 1.2
PPP2R1A-204ENST00000462047 NPM2Q86SE8 214 aaKnown RBP22.54■■□□□ 1.2
PPP2R1A-204ENST00000462047 KIAA1551Q9HCM1 1747 aa22.54■■□□□ 1.2
PPP2R1A-204ENST00000462047 ADAMTS7Q9UKP4 1686 aa22.53■■□□□ 1.2
PPP2R1A-204ENST00000462047 KIF3CO14782 793 aa22.53■■□□□ 1.2
PPP2R1A-204ENST00000462047 SERPINB2P05120 415 aa22.53■■□□□ 1.2
PPP2R1A-204ENST00000462047 HSPA6P17066 643 aa22.53■■□□□ 1.2
PPP2R1A-204ENST00000462047 PRKAR2BP31323 418 aa22.53■■□□□ 1.2
PPP2R1A-204ENST00000462047 PHACTR3Q96KR7 559 aa22.53■■□□□ 1.2
PPP2R1A-204ENST00000462047 FMNL2Q96PY5 1086 aa22.53■■□□□ 1.2
PPP2R1A-204ENST00000462047 C9orf131Q5VYM1 1079 aa22.52■■□□□ 1.2
PPP2R1A-204ENST00000462047 HEG1Q9ULI3 1381 aa22.51■■□□□ 1.19
PPP2R1A-204ENST00000462047 U2AF1L5P0DN76 240 aaPredicted RBP22.51■■□□□ 1.19
PPP2R1A-204ENST00000462047 U2AF1Q01081 240 aaKnown RBP eCLIP22.51■■□□□ 1.19
PPP2R1A-204ENST00000462047 RSPH6AQ9H0K4 717 aa22.51■■□□□ 1.19
PPP2R1A-204ENST00000462047 BCL2L12Q9HB09 334 aa22.51■■□□□ 1.19
PPP2R1A-204ENST00000462047 BTBD11A6QL63 1104 aa22.5■■□□□ 1.19
PPP2R1A-204ENST00000462047 PPP2R1AP30153 589 aa22.5■■□□□ 1.19
PPP2R1A-204ENST00000462047 RTF1Q92541 710 aaKnown RBP22.5■■□□□ 1.19
PPP2R1A-204ENST00000462047 CEP350Q5VT06 3117 aa22.49■■□□□ 1.19
PPP2R1A-204ENST00000462047 TOMM70O94826 608 aa22.49■■□□□ 1.19
PPP2R1A-204ENST00000462047 IL6STP40189 918 aaPredicted RBP22.49■■□□□ 1.19
PPP2R1A-204ENST00000462047 CEMIPQ8WUJ3 1361 aa22.49■■□□□ 1.19
PPP2R1A-204ENST00000462047 H0YIN7 160 aa22.48■■□□□ 1.19
PPP2R1A-204ENST00000462047 BICDL1Q6ZP65 573 aa22.47■■□□□ 1.19
PPP2R1A-204ENST00000462047 PDZRN3Q9UPQ7 1066 aa22.47■■□□□ 1.19
PPP2R1A-204ENST00000462047 ZNF330Q9Y3S2 320 aaPredicted RBP22.47■■□□□ 1.19
PPP2R1A-204ENST00000462047 C2CD5Q86YS7 1000 aa22.46■■□□□ 1.19
PPP2R1A-204ENST00000462047 TTLL6Q8N841 843 aa22.46■■□□□ 1.19
PPP2R1A-204ENST00000462047 RNF181Q9P0P0 153 aa22.46■■□□□ 1.19
PPP2R1A-204ENST00000462047 TBC1D2BQ9UPU7 963 aa22.46■■□□□ 1.19
PPP2R1A-204ENST00000462047 HTATSF1O43719 755 aaKnown RBP22.45■■□□□ 1.18
PPP2R1A-204ENST00000462047 KDM2BQ8NHM5 1336 aa22.45■■□□□ 1.18
PPP2R1A-204ENST00000462047 VIRMAQ69YN4 1812 aaKnown RBP22.45■■□□□ 1.18
PPP2R1A-204ENST00000462047 BRCA1P38398 1863 aaKnown RBP22.45■■□□□ 1.18
PPP2R1A-204ENST00000462047 A1BGP04217 495 aa22.44■■□□□ 1.18
PPP2R1A-204ENST00000462047 C16orf71Q8IYS4 520 aaPredicted RBP22.44■■□□□ 1.18
PPP2R1A-204ENST00000462047 NMRK2Q9NPI5 230 aa22.44■■□□□ 1.18
PPP2R1A-204ENST00000462047 ARFGEF1Q9Y6D6 1849 aa22.44■■□□□ 1.18
PPP2R1A-204ENST00000462047 UBR2Q8IWV8 1755 aa22.43■■□□□ 1.18
PPP2R1A-204ENST00000462047 PDE6BP35913 854 aa22.43■■□□□ 1.18
PPP2R1A-204ENST00000462047 TBC1D9BQ66K14 1250 aa22.43■■□□□ 1.18
PPP2R1A-204ENST00000462047 SETDB2Q96T68 719 aa22.43■■□□□ 1.18
PPP2R1A-204ENST00000462047 BRIP1Q9BX63 1249 aa22.43■■□□□ 1.18
PPP2R1A-204ENST00000462047 KCNQ3O43525 872 aa22.42■■□□□ 1.18
PPP2R1A-204ENST00000462047 NEFMP07197 916 aa22.42■■□□□ 1.18
PPP2R1A-204ENST00000462047 SNRPA1P09661 255 aaKnown RBP22.42■■□□□ 1.18
PPP2R1A-204ENST00000462047 APLP1P51693 650 aa22.41■■□□□ 1.18
PPP2R1A-204ENST00000462047 MCM10Q7L590 875 aa22.41■■□□□ 1.18
PPP2R1A-204ENST00000462047 ZC3H4Q9UPT8 1303 aaKnown RBP22.4■■□□□ 1.18
PPP2R1A-204ENST00000462047 LMNB1P20700 586 aa22.4■■□□□ 1.18
PPP2R1A-204ENST00000462047 RBM46Q8TBY0 533 aaKnown RBP22.4■■□□□ 1.18
PPP2R1A-204ENST00000462047 USP16Q9Y5T5 823 aa22.4■■□□□ 1.18
PPP2R1A-204ENST00000462047 CARMIL3Q8ND23 1372 aa22.39■■□□□ 1.18
PPP2R1A-204ENST00000462047 NPHP1O15259 732 aa22.39■■□□□ 1.17
PPP2R1A-204ENST00000462047 CAMTA2O94983 1202 aa22.38■■□□□ 1.17
PPP2R1A-204ENST00000462047 TAF7Q15545 349 aaPredicted RBP22.38■■□□□ 1.17
PPP2R1A-204ENST00000462047 PRR5LQ6MZQ0 368 aa22.38■■□□□ 1.17
PPP2R1A-204ENST00000462047 CLEC4GQ6UXB4 293 aa22.38■■□□□ 1.17
PPP2R1A-204ENST00000462047 DZIP3Q86Y13 1208 aaKnown RBP22.38■■□□□ 1.17
PPP2R1A-204ENST00000462047 ZNF622Q969S3 477 aaKnown RBP eCLIP22.38■■□□□ 1.17
PPP2R1A-204ENST00000462047 NRXN2Q9P2S2 1712 aa22.37■■□□□ 1.17
PPP2R1A-204ENST00000462047 AFDNP55196 1824 aaKnown RBP22.37■■□□□ 1.17
PPP2R1A-204ENST00000462047 CNBD1Q8NA66 436 aa22.36■■□□□ 1.17
PPP2R1A-204ENST00000462047 RRAGCQ9HB90 399 aa22.36■■□□□ 1.17
PPP2R1A-204ENST00000462047 ZNF652Q9Y2D9 606 aa22.36■■□□□ 1.17
PPP2R1A-204ENST00000462047 SIPA1L3O60292 1781 aaPredicted RBP22.35■■□□□ 1.17
PPP2R1A-204ENST00000462047 ST5P78524 1137 aa22.35■■□□□ 1.17
PPP2R1A-204ENST00000462047 RASSF7Q02833 373 aa22.35■■□□□ 1.17
PPP2R1A-204ENST00000462047 FSTL1Q12841 308 aa22.35■■□□□ 1.17
PPP2R1A-204ENST00000462047 DCTN1Q14203 1278 aa22.35■■□□□ 1.17
PPP2R1A-204ENST00000462047 PNNQ9H307 717 aaKnown RBP22.35■■□□□ 1.17
PPP2R1A-204ENST00000462047 RGL2O15211 777 aa22.34■■□□□ 1.17
PPP2R1A-204ENST00000462047 PNISRQ8TF01 805 aaKnown RBP22.34■■□□□ 1.17
PPP2R1A-204ENST00000462047 CNKSR1Q969H4 720 aa22.34■■□□□ 1.17
PPP2R1A-204ENST00000462047 GLTPD2A6NH11 291 aa22.32■■□□□ 1.16
PPP2R1A-204ENST00000462047 CCDC24Q8N4L8 307 aa22.32■■□□□ 1.16
PPP2R1A-204ENST00000462047 PRAMEF22A3QJZ6 481 aa22.31■■□□□ 1.16
PPP2R1A-204ENST00000462047 STYK1Q6J9G0 422 aa22.31■■□□□ 1.16
PPP2R1A-204ENST00000462047 NBPF5PQ86XG9 351 aaPredicted RBP22.31■■□□□ 1.16
PPP2R1A-204ENST00000462047 C21orf2O43822 256 aa22.3■■□□□ 1.16
PPP2R1A-204ENST00000462047 VEGFAP15692 232 aaPredicted RBP22.3■■□□□ 1.16
PPP2R1A-204ENST00000462047 PIP4K2AP48426 406 aaPredicted RBP22.3■■□□□ 1.16
PPP2R1A-204ENST00000462047 SOGA3Q5TF21 947 aa22.3■■□□□ 1.16
PPP2R1A-204ENST00000462047 DPY19L2Q6NUT2 758 aa22.3■■□□□ 1.16
PPP2R1A-204ENST00000462047 TPTE2Q6XPS3 522 aa22.3■■□□□ 1.16
PPP2R1A-204ENST00000462047 SBF1O95248 1867 aa22.29■■□□□ 1.16
PPP2R1A-204ENST00000462047 NFKBIEO00221 500 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms