RNA–Protein interactions for RNA: ENST00000462018.1

GABRE-204, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-204ENST00000462018 PRR29P0C7W0 189 aa11.5□□□□□ -0.57
GABRE-204ENST00000462018 DCAF11Q8TEB1 546 aa11.5□□□□□ -0.57
GABRE-204ENST00000462018 PIGBQ92521 554 aa11.5□□□□□ -0.57
GABRE-204ENST00000462018 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
GABRE-204ENST00000462018 GPR101Q96P66 508 aaPredicted RBP11.5□□□□□ -0.57
GABRE-204ENST00000462018 FER1L6Q2WGJ9 1857 aa11.5□□□□□ -0.57
GABRE-204ENST00000462018 NBPF1Q3BBV0 1214 aa11.49□□□□□ -0.57
GABRE-204ENST00000462018 ERFEQ4G0M1 354 aa11.49□□□□□ -0.57
GABRE-204ENST00000462018 EAPPQ56P03 285 aaPredicted RBP11.49□□□□□ -0.57
GABRE-204ENST00000462018 NME9Q86XW9 330 aa11.49□□□□□ -0.57
GABRE-204ENST00000462018 ZBTB47Q9UFB7 747 aaPredicted RBP11.49□□□□□ -0.57
GABRE-204ENST00000462018 SZT2Q5T011 3432 aa11.48□□□□□ -0.57
GABRE-204ENST00000462018 FMR1Q06787 632 aaKnown RBP eCLIP11.48□□□□□ -0.57
GABRE-204ENST00000462018 TRAPPC3LQ5T215 181 aa11.48□□□□□ -0.57
GABRE-204ENST00000462018 MAP1SQ66K74 1059 aaPredicted RBP11.48□□□□□ -0.57
GABRE-204ENST00000462018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.48□□□□□ -0.57
GABRE-204ENST00000462018 RTCBQ9Y3I0 505 aaKnown RBP11.48□□□□□ -0.57
GABRE-204ENST00000462018 KTN1Q86UP2 1357 aaKnown RBP11.48□□□□□ -0.57
GABRE-204ENST00000462018 AFDNP55196 1824 aaKnown RBP11.48□□□□□ -0.57
GABRE-204ENST00000462018 CENPJQ9HC77 1338 aaPredicted RBP11.47□□□□□ -0.57
GABRE-204ENST00000462018 ECE1P42892 770 aa11.47□□□□□ -0.57
GABRE-204ENST00000462018 NBPF15Q8N660 670 aa11.47□□□□□ -0.57
GABRE-204ENST00000462018 USHBP1Q8N6Y0 703 aa11.47□□□□□ -0.57
GABRE-204ENST00000462018 IP6K1Q92551 441 aa11.47□□□□□ -0.57
GABRE-204ENST00000462018 MYH14Q7Z406 1995 aaKnown RBP11.47□□□□□ -0.57
GABRE-204ENST00000462018 KDRP35968 1356 aa11.46□□□□□ -0.57
GABRE-204ENST00000462018 PCDH11XQ9BZA7 1347 aa11.46□□□□□ -0.57
GABRE-204ENST00000462018 PCDH11YQ9BZA8 1340 aa11.46□□□□□ -0.57
GABRE-204ENST00000462018 ATP6V1AP38606 617 aa11.46□□□□□ -0.57
GABRE-204ENST00000462018 PPARGC1BQ86YN6 1023 aaKnown RBP11.46□□□□□ -0.57
GABRE-204ENST00000462018 SRP68Q9UHB9 627 aaKnown RBP11.46□□□□□ -0.57
GABRE-204ENST00000462018 TRPM7Q96QT4 1865 aa11.46□□□□□ -0.58
GABRE-204ENST00000462018 CD163L1Q9NR16 1453 aa11.45□□□□□ -0.58
GABRE-204ENST00000462018 IQCA1LA6NCM1 817 aa11.45□□□□□ -0.58
GABRE-204ENST00000462018 CA12O43570 354 aa11.45□□□□□ -0.58
GABRE-204ENST00000462018 SLC24A1O60721 1099 aa11.45□□□□□ -0.58
GABRE-204ENST00000462018 RFC4P35249 363 aa11.45□□□□□ -0.58
GABRE-204ENST00000462018 CNTROBQ8N137 903 aa11.45□□□□□ -0.58
GABRE-204ENST00000462018 ASAP1Q9ULH1 1129 aa11.45□□□□□ -0.58
GABRE-204ENST00000462018 MKI67P46013 3256 aaKnown RBP11.45□□□□□ -0.58
GABRE-204ENST00000462018 A0A0C4DFX4 3053 aa11.44□□□□□ -0.58
GABRE-204ENST00000462018 NRXN2Q9P2S2 1712 aa11.44□□□□□ -0.58
GABRE-204ENST00000462018 POLRMTO00411 1230 aaKnown RBP11.44□□□□□ -0.58
GABRE-204ENST00000462018 PITPNM1O00562 1244 aa11.44□□□□□ -0.58
GABRE-204ENST00000462018 CYP27B1O15528 508 aa11.44□□□□□ -0.58
GABRE-204ENST00000462018 SLC17A8Q8NDX2 589 aa11.44□□□□□ -0.58
GABRE-204ENST00000462018 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
GABRE-204ENST00000462018 CIZ1Q9ULV3 898 aaPredicted RBP11.44□□□□□ -0.58
GABRE-204ENST00000462018 COL11A2P13942 1736 aaPredicted RBP11.43□□□□□ -0.58
GABRE-204ENST00000462018 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
GABRE-204ENST00000462018 TTLL6Q8N841 843 aa11.43□□□□□ -0.58
GABRE-204ENST00000462018 DDX21Q9NR30 783 aaKnown RBP eCLIP11.43□□□□□ -0.58
GABRE-204ENST00000462018 ZNF831Q5JPB2 1677 aa11.43□□□□□ -0.58
GABRE-204ENST00000462018 SBNO2Q9Y2G9 1366 aa11.42□□□□□ -0.58
GABRE-204ENST00000462018 MAP2K2P36507 400 aa11.42□□□□□ -0.58
GABRE-204ENST00000462018 SLC4A9Q96Q91 983 aa11.42□□□□□ -0.58
GABRE-204ENST00000462018 CARMIL3Q8ND23 1372 aa11.41□□□□□ -0.58
GABRE-204ENST00000462018 SCN11AQ9UI33 1791 aa11.41□□□□□ -0.58
GABRE-204ENST00000462018 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
GABRE-204ENST00000462018 PITPNM2Q9BZ72 1349 aa11.41□□□□□ -0.58
GABRE-204ENST00000462018 CACNA1SQ13698 1873 aa11.41□□□□□ -0.58
GABRE-204ENST00000462018 HOXC9P31274 260 aa11.41□□□□□ -0.58
GABRE-204ENST00000462018 BRPF1P55201 1214 aaPredicted RBP11.41□□□□□ -0.58
GABRE-204ENST00000462018 NBPF6Q5VWK0 638 aa11.41□□□□□ -0.58
GABRE-204ENST00000462018 CIAPIN1Q6FI81 312 aa11.41□□□□□ -0.58
GABRE-204ENST00000462018 RAPGEF4Q8WZA2 1011 aa11.41□□□□□ -0.58
GABRE-204ENST00000462018 NBPF4Q96M43 638 aa11.41□□□□□ -0.58
GABRE-204ENST00000462018 SMG6Q86US8 1419 aaKnown RBP11.41□□□□□ -0.58
GABRE-204ENST00000462018 CNTNAP4Q9C0A0 1308 aa11.4□□□□□ -0.58
GABRE-204ENST00000462018 ZNF541Q9H0D2 1346 aa11.4□□□□□ -0.58
GABRE-204ENST00000462018 USP42Q9H9J4 1324 aaKnown RBP11.4□□□□□ -0.58
GABRE-204ENST00000462018 EPHX2P34913 555 aa11.4□□□□□ -0.58
GABRE-204ENST00000462018 TLL2Q9Y6L7 1015 aa11.4□□□□□ -0.58
GABRE-204ENST00000462018 ANKRD31Q8N7Z5 1873 aa11.4□□□□□ -0.59
GABRE-204ENST00000462018 MAP3K19Q56UN5 1328 aa11.39□□□□□ -0.59
GABRE-204ENST00000462018 COL6A3P12111 3177 aa11.39□□□□□ -0.59
GABRE-204ENST00000462018 C21orf2O43822 256 aa11.39□□□□□ -0.59
GABRE-204ENST00000462018 RPS6KA4O75676 772 aa11.39□□□□□ -0.59
GABRE-204ENST00000462018 TATP17735 454 aaPredicted RBP11.39□□□□□ -0.59
GABRE-204ENST00000462018 CST9Q5W186 159 aa11.39□□□□□ -0.59
GABRE-204ENST00000462018 ATG3Q9NT62 314 aa11.39□□□□□ -0.59
GABRE-204ENST00000462018 HACL1Q9UJ83 578 aa11.39□□□□□ -0.59
GABRE-204ENST00000462018 RNF123Q5XPI4 1314 aa11.38□□□□□ -0.59
GABRE-204ENST00000462018 TRIOBPQ9H2D6 2365 aa11.38□□□□□ -0.59
GABRE-204ENST00000462018 TRAF5O00463 557 aa11.38□□□□□ -0.59
GABRE-204ENST00000462018 C2CD5Q86YS7 1000 aa11.38□□□□□ -0.59
GABRE-204ENST00000462018 ZIC5Q96T25 663 aa11.38□□□□□ -0.59
GABRE-204ENST00000462018 EVC2Q86UK5 1308 aa11.37□□□□□ -0.59
GABRE-204ENST00000462018 LTBP3Q9NS15 1303 aa11.37□□□□□ -0.59
GABRE-204ENST00000462018 TM4SF1P30408 202 aa11.37□□□□□ -0.59
GABRE-204ENST00000462018 RC3H1Q5TC82 1133 aaKnown RBP11.37□□□□□ -0.59
GABRE-204ENST00000462018 TAOK3Q9H2K8 898 aa11.37□□□□□ -0.59
GABRE-204ENST00000462018 TMOD3Q9NYL9 352 aa11.37□□□□□ -0.59
GABRE-204ENST00000462018 HPS5Q9UPZ3 1129 aa11.37□□□□□ -0.59
GABRE-204ENST00000462018 FBLN1P23142 703 aa11.36□□□□□ -0.59
GABRE-204ENST00000462018 TJP1Q07157 1748 aa11.35□□□□□ -0.59
GABRE-204ENST00000462018 SLX4Q8IY92 1834 aa11.35□□□□□ -0.59
GABRE-204ENST00000462018 AMPHP49418 695 aa11.34□□□□□ -0.59
GABRE-204ENST00000462018 PNMA8AQ86V59 439 aaPredicted RBP11.34□□□□□ -0.59
GABRE-204ENST00000462018 STAC3Q96MF2 364 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms