RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 SOS1Q07889 1333 aaPredicted RBP18.31■□□□□ 0.52
RBM39-222ENST00000461849 FKBP8Q14318 412 aa18.31■□□□□ 0.52
RBM39-222ENST00000461849 USPL1Q5W0Q7 1092 aa18.31■□□□□ 0.52
RBM39-222ENST00000461849 FMNL2Q96PY5 1086 aa18.31■□□□□ 0.52
RBM39-222ENST00000461849 COL15A1P39059 1388 aa18.3■□□□□ 0.52
RBM39-222ENST00000461849 CEMIPQ8WUJ3 1361 aa18.3■□□□□ 0.52
RBM39-222ENST00000461849 CANXP27824 592 aaKnown RBP18.3■□□□□ 0.52
RBM39-222ENST00000461849 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
RBM39-222ENST00000461849 ZNF496Q96IT1 587 aaPredicted RBP18.3■□□□□ 0.52
RBM39-222ENST00000461849 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
RBM39-222ENST00000461849 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
RBM39-222ENST00000461849 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
RBM39-222ENST00000461849 NARFQ9UHQ1 456 aa18.29■□□□□ 0.52
RBM39-222ENST00000461849 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
RBM39-222ENST00000461849 MCM10Q7L590 875 aa18.28■□□□□ 0.52
RBM39-222ENST00000461849 C10orf71Q711Q0 1435 aa18.28■□□□□ 0.52
RBM39-222ENST00000461849 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.52
RBM39-222ENST00000461849 A0A087WZG4 1122 aa18.27■□□□□ 0.52
RBM39-222ENST00000461849 A0A0G2JLW4 131 aa18.27■□□□□ 0.52
RBM39-222ENST00000461849 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
RBM39-222ENST00000461849 ZNF330Q9Y3S2 320 aaPredicted RBP18.27■□□□□ 0.52
RBM39-222ENST00000461849 PXDNLA1KZ92 1463 aa18.26■□□□□ 0.51
RBM39-222ENST00000461849 KIF13BQ9NQT8 1826 aa18.26■□□□□ 0.51
RBM39-222ENST00000461849 BCS1LQ9Y276 419 aa18.26■□□□□ 0.51
RBM39-222ENST00000461849 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
RBM39-222ENST00000461849 DPEP1P16444 411 aa18.25■□□□□ 0.51
RBM39-222ENST00000461849 TM4SF1P30408 202 aa18.25■□□□□ 0.51
RBM39-222ENST00000461849 DDR1Q08345 913 aa18.25■□□□□ 0.51
RBM39-222ENST00000461849 DCTN1Q14203 1278 aa18.25■□□□□ 0.51
RBM39-222ENST00000461849 N4BP2Q86UW6 1770 aaPredicted RBP18.25■□□□□ 0.51
RBM39-222ENST00000461849 POLRMTO00411 1230 aaKnown RBP18.24■□□□□ 0.51
RBM39-222ENST00000461849 KCNQ3O43525 872 aa18.24■□□□□ 0.51
RBM39-222ENST00000461849 EIF5P55010 431 aaKnown RBP18.24■□□□□ 0.51
RBM39-222ENST00000461849 MIER1Q8N108 512 aa18.24■□□□□ 0.51
RBM39-222ENST00000461849 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
RBM39-222ENST00000461849 NFIXQ14938 502 aa18.22■□□□□ 0.51
RBM39-222ENST00000461849 TAF7Q15545 349 aaPredicted RBP18.22■□□□□ 0.51
RBM39-222ENST00000461849 PIM2Q9P1W9 311 aa18.22■□□□□ 0.51
RBM39-222ENST00000461849 GIGYF1O75420 1035 aaPredicted RBP18.21■□□□□ 0.51
RBM39-222ENST00000461849 A1BGP04217 495 aa18.21■□□□□ 0.51
RBM39-222ENST00000461849 SNRPA1P09661 255 aaKnown RBP18.21■□□□□ 0.51
RBM39-222ENST00000461849 BICDL1Q6ZP65 573 aa18.21■□□□□ 0.51
RBM39-222ENST00000461849 MRS2Q9HD23 443 aa18.21■□□□□ 0.51
RBM39-222ENST00000461849 SERPINB2P05120 415 aa18.2■□□□□ 0.5
RBM39-222ENST00000461849 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
RBM39-222ENST00000461849 TBC1D2BQ9UPU7 963 aa18.2■□□□□ 0.5
RBM39-222ENST00000461849 KIAA1551Q9HCM1 1747 aa18.2■□□□□ 0.5
RBM39-222ENST00000461849 NFE2L2Q16236 605 aa18.19■□□□□ 0.5
RBM39-222ENST00000461849 CCDC184Q52MB2 194 aa18.19■□□□□ 0.5
RBM39-222ENST00000461849 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
RBM39-222ENST00000461849 ARHGAP27Q6ZUM4 889 aa18.19■□□□□ 0.5
RBM39-222ENST00000461849 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
RBM39-222ENST00000461849 BCL2L12Q9HB09 334 aa18.19■□□□□ 0.5
RBM39-222ENST00000461849 USP16Q9Y5T5 823 aa18.19■□□□□ 0.5
RBM39-222ENST00000461849 ATP10DQ9P241 1426 aa18.18■□□□□ 0.5
RBM39-222ENST00000461849 KCNA3P22001 575 aa18.18■□□□□ 0.5
RBM39-222ENST00000461849 GPBP1L1Q9HC44 474 aaPredicted RBP18.18■□□□□ 0.5
RBM39-222ENST00000461849 NPHP1O15259 732 aa18.17■□□□□ 0.5
RBM39-222ENST00000461849 CHRNA5P30532 468 aa18.17■□□□□ 0.5
RBM39-222ENST00000461849 MIS18AQ9NYP9 233 aa18.17■□□□□ 0.5
RBM39-222ENST00000461849 PRAMEF22A3QJZ6 481 aa18.16■□□□□ 0.5
RBM39-222ENST00000461849 C1QTNF8P60827 252 aa18.16■□□□□ 0.5
RBM39-222ENST00000461849 TBC1D9BQ66K14 1250 aa18.16■□□□□ 0.5
RBM39-222ENST00000461849 DZIP3Q86Y13 1208 aaKnown RBP18.16■□□□□ 0.5
RBM39-222ENST00000461849 ZNF526Q8TF50 670 aaPredicted RBP18.16■□□□□ 0.5
RBM39-222ENST00000461849 DLG5Q8TDM6 1919 aa18.15■□□□□ 0.5
RBM39-222ENST00000461849 PIP4K2AP48426 406 aaPredicted RBP18.15■□□□□ 0.5
RBM39-222ENST00000461849 WDR43Q15061 677 aaKnown RBP eCLIP18.15■□□□□ 0.5
RBM39-222ENST00000461849 SETDB2Q96T68 719 aa18.15■□□□□ 0.5
RBM39-222ENST00000461849 AFDNP55196 1824 aaKnown RBP18.14■□□□□ 0.5
RBM39-222ENST00000461849 BRCA1P38398 1863 aaKnown RBP18.14■□□□□ 0.49
RBM39-222ENST00000461849 CARMIL3Q8ND23 1372 aa18.14■□□□□ 0.49
RBM39-222ENST00000461849 SCN7AQ01118 1682 aa18.13■□□□□ 0.49
RBM39-222ENST00000461849 H0YIN7 160 aa18.13■□□□□ 0.49
RBM39-222ENST00000461849 CAMTA2O94983 1202 aa18.13■□□□□ 0.49
RBM39-222ENST00000461849 RIPK4P57078 832 aa18.13■□□□□ 0.49
RBM39-222ENST00000461849 THUMPD2Q9BTF0 503 aaKnown RBP18.13■□□□□ 0.49
RBM39-222ENST00000461849 ZNF652Q9Y2D9 606 aa18.13■□□□□ 0.49
RBM39-222ENST00000461849 ADCY9O60503 1353 aa18.13■□□□□ 0.49
RBM39-222ENST00000461849 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
RBM39-222ENST00000461849 LMOD3Q0VAK6 560 aa18.12■□□□□ 0.49
RBM39-222ENST00000461849 C2CD5Q86YS7 1000 aa18.12■□□□□ 0.49
RBM39-222ENST00000461849 ARFGEF1Q9Y6D6 1849 aa18.12■□□□□ 0.49
RBM39-222ENST00000461849 PDE6BP35913 854 aa18.11■□□□□ 0.49
RBM39-222ENST00000461849 PDZRN3Q9UPQ7 1066 aa18.11■□□□□ 0.49
RBM39-222ENST00000461849 ST5P78524 1137 aa18.1■□□□□ 0.49
RBM39-222ENST00000461849 IFFO2Q5TF58 517 aa18.1■□□□□ 0.49
RBM39-222ENST00000461849 CLEC4GQ6UXB4 293 aa18.1■□□□□ 0.49
RBM39-222ENST00000461849 TTLL6Q8N841 843 aa18.1■□□□□ 0.49
RBM39-222ENST00000461849 CNBD1Q8NA66 436 aa18.1■□□□□ 0.49
RBM39-222ENST00000461849 TSPYL4Q9UJ04 414 aa18.1■□□□□ 0.49
RBM39-222ENST00000461849 ADAMTS8Q9UP79 889 aa18.1■□□□□ 0.49
RBM39-222ENST00000461849 EIF4A1P60842 406 aaKnown RBP18.09■□□□□ 0.49
RBM39-222ENST00000461849 PRR5LQ6MZQ0 368 aa18.09■□□□□ 0.49
RBM39-222ENST00000461849 BRIP1Q9BX63 1249 aa18.09■□□□□ 0.49
RBM39-222ENST00000461849 SENP3-EIF4A1A0A087X0R7 540 aa18.08■□□□□ 0.48
RBM39-222ENST00000461849 NBPF26B4DH59 902 aa18.08■□□□□ 0.48
RBM39-222ENST00000461849 TMPOP42166 694 aaKnown RBP18.08■□□□□ 0.48
RBM39-222ENST00000461849 NEUROD2Q15784 382 aa18.08■□□□□ 0.48
RBM39-222ENST00000461849 C9orf131Q5VYM1 1079 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms