RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 FOXD4L1Q9NU39 408 aa9.17□□□□□ -0.94
NPHP1-209ENST00000461707 MTX1Q13505 466 aa9.17□□□□□ -0.94
NPHP1-209ENST00000461707 TBC1D9Q6ZT07 1266 aa9.17□□□□□ -0.94
NPHP1-209ENST00000461707 C14orf37Q86TY3 774 aa9.17□□□□□ -0.94
NPHP1-209ENST00000461707 TNRC6CQ9HCJ0 1690 aaKnown RBP9.16□□□□□ -0.94
NPHP1-209ENST00000461707 SLC4A10Q6U841 1118 aa9.16□□□□□ -0.94
NPHP1-209ENST00000461707 ZBTB7CA1YPR0 619 aa9.16□□□□□ -0.94
NPHP1-209ENST00000461707 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
NPHP1-209ENST00000461707 ABTB2Q8N961 1025 aa9.16□□□□□ -0.94
NPHP1-209ENST00000461707 EPB41L2O43491 1005 aaKnown RBP9.16□□□□□ -0.94
NPHP1-209ENST00000461707 CALD1Q05682 793 aaKnown RBP9.16□□□□□ -0.94
NPHP1-209ENST00000461707 CEP85Q6P2H3 762 aa9.16□□□□□ -0.94
NPHP1-209ENST00000461707 TSPYL4Q9UJ04 414 aa9.16□□□□□ -0.94
NPHP1-209ENST00000461707 MYH14Q7Z406 1995 aaKnown RBP9.15□□□□□ -0.94
NPHP1-209ENST00000461707 FSD2A1L4K1 749 aa9.15□□□□□ -0.94
NPHP1-209ENST00000461707 KCNQ3O43525 872 aa9.15□□□□□ -0.94
NPHP1-209ENST00000461707 LMOD3Q0VAK6 560 aa9.15□□□□□ -0.94
NPHP1-209ENST00000461707 STAP2Q9UGK3 403 aa9.15□□□□□ -0.94
NPHP1-209ENST00000461707 PDIA6Q15084 440 aa9.15□□□□□ -0.95
NPHP1-209ENST00000461707 ARHGEF25Q86VW2 580 aa9.15□□□□□ -0.95
NPHP1-209ENST00000461707 THEMISQ8N1K5 641 aaPredicted RBP9.15□□□□□ -0.95
NPHP1-209ENST00000461707 LRRC59Q96AG4 307 aaKnown RBP9.15□□□□□ -0.95
NPHP1-209ENST00000461707 AOX1Q06278 1338 aa9.14□□□□□ -0.95
NPHP1-209ENST00000461707 ZBTB22O15209 634 aa9.14□□□□□ -0.95
NPHP1-209ENST00000461707 API5Q9BZZ5 524 aaKnown RBP9.14□□□□□ -0.95
NPHP1-209ENST00000461707 UPF2Q9HAU5 1272 aaKnown RBP9.14□□□□□ -0.95
NPHP1-209ENST00000461707 LGR6Q9HBX8 967 aa9.14□□□□□ -0.95
NPHP1-209ENST00000461707 NBPF6Q5VWK0 638 aa9.14□□□□□ -0.95
NPHP1-209ENST00000461707 IP6K1Q92551 441 aa9.14□□□□□ -0.95
NPHP1-209ENST00000461707 NBPF4Q96M43 638 aa9.14□□□□□ -0.95
NPHP1-209ENST00000461707 ARXQ96QS3 562 aa9.14□□□□□ -0.95
NPHP1-209ENST00000461707 ORAI2Q96SN7 254 aa9.14□□□□□ -0.95
NPHP1-209ENST00000461707 ANKRD44Q8N8A2 993 aa9.13□□□□□ -0.95
NPHP1-209ENST00000461707 ANXA1P04083 346 aa9.13□□□□□ -0.95
NPHP1-209ENST00000461707 GCC1Q96CN9 775 aa9.13□□□□□ -0.95
NPHP1-209ENST00000461707 PHAXQ9H814 394 aaKnown RBP9.13□□□□□ -0.95
NPHP1-209ENST00000461707 TCHHQ07283 1943 aa9.12□□□□□ -0.95
NPHP1-209ENST00000461707 PNMA6EA0A0J9YXQ4 647 aa9.12□□□□□ -0.95
NPHP1-209ENST00000461707 BECN1Q14457 450 aa9.12□□□□□ -0.95
NPHP1-209ENST00000461707 GREB1LQ9C091 1923 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-209ENST00000461707 UBR3Q6ZT12 1888 aa9.12□□□□□ -0.95
NPHP1-209ENST00000461707 EXOC6BQ9Y2D4 811 aa9.12□□□□□ -0.95
NPHP1-209ENST00000461707 DDX17Q92841 729 aaKnown RBP9.12□□□□□ -0.95
NPHP1-209ENST00000461707 PSME4Q14997 1843 aa9.11□□□□□ -0.95
NPHP1-209ENST00000461707 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
NPHP1-209ENST00000461707 RTF1Q92541 710 aaKnown RBP9.11□□□□□ -0.95
NPHP1-209ENST00000461707 GZF1Q9H116 711 aaPredicted RBP9.11□□□□□ -0.95
NPHP1-209ENST00000461707 CACNA1SQ13698 1873 aa9.11□□□□□ -0.95
NPHP1-209ENST00000461707 PRAMEF22A3QJZ6 481 aa9.11□□□□□ -0.95
NPHP1-209ENST00000461707 BCL9O00512 1426 aa9.11□□□□□ -0.95
NPHP1-209ENST00000461707 SOS2Q07890 1332 aaPredicted RBP9.11□□□□□ -0.95
NPHP1-209ENST00000461707 SDSP20132 328 aa9.1□□□□□ -0.95
NPHP1-209ENST00000461707 PHF8Q9UPP1 1060 aa9.1□□□□□ -0.95
NPHP1-209ENST00000461707 AXIN2Q9Y2T1 843 aa9.1□□□□□ -0.95
NPHP1-209ENST00000461707 MYH13Q9UKX3 1938 aa9.1□□□□□ -0.95
NPHP1-209ENST00000461707 GNAT3A8MTJ3 354 aa9.1□□□□□ -0.95
NPHP1-209ENST00000461707 NKX1-1Q15270 411 aaPredicted RBP9.1□□□□□ -0.95
NPHP1-209ENST00000461707 TTC22Q5TAA0 569 aa9.1□□□□□ -0.95
NPHP1-209ENST00000461707 CHAMP1Q96JM3 812 aa9.1□□□□□ -0.95
NPHP1-209ENST00000461707 CASP7P55210 303 aa9.09□□□□□ -0.95
NPHP1-209ENST00000461707 FLIIQ13045 1269 aa9.09□□□□□ -0.95
NPHP1-209ENST00000461707 BTAF1O14981 1849 aa9.09□□□□□ -0.95
NPHP1-209ENST00000461707 GAS2L2Q8NHY3 880 aa9.09□□□□□ -0.95
NPHP1-209ENST00000461707 KAZALD1Q96I82 304 aa9.09□□□□□ -0.95
NPHP1-209ENST00000461707 IL25Q9H293 177 aa9.09□□□□□ -0.95
NPHP1-209ENST00000461707 EIF2S2P20042 333 aaKnown RBP9.08□□□□□ -0.96
NPHP1-209ENST00000461707 FKBP5Q13451 457 aaPredicted RBP9.08□□□□□ -0.96
NPHP1-209ENST00000461707 MPRIPQ6WCQ1 1025 aa9.08□□□□□ -0.96
NPHP1-209ENST00000461707 RFX7Q2KHR2 1363 aa9.08□□□□□ -0.96
NPHP1-209ENST00000461707 UNC5CLQ8IV45 518 aa9.08□□□□□ -0.96
NPHP1-209ENST00000461707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.08□□□□□ -0.96
NPHP1-209ENST00000461707 PKP1Q13835 747 aa9.08□□□□□ -0.96
NPHP1-209ENST00000461707 LMOD2Q6P5Q4 547 aa9.08□□□□□ -0.96
NPHP1-209ENST00000461707 MCM4P33991 863 aa9.07□□□□□ -0.96
NPHP1-209ENST00000461707 USP44Q9H0E7 712 aa9.07□□□□□ -0.96
NPHP1-209ENST00000461707 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
NPHP1-209ENST00000461707 LRRFIP2Q9Y608 721 aaKnown RBP9.07□□□□□ -0.96
NPHP1-209ENST00000461707 ERBB3P21860 1342 aa9.07□□□□□ -0.96
NPHP1-209ENST00000461707 EIF4A1P60842 406 aaKnown RBP9.07□□□□□ -0.96
NPHP1-209ENST00000461707 PSME1Q06323 249 aa9.07□□□□□ -0.96
NPHP1-209ENST00000461707 TNS1Q9HBL0 1735 aaKnown RBP9.06□□□□□ -0.96
NPHP1-209ENST00000461707 PROSER3Q2NL68 480 aa9.06□□□□□ -0.96
NPHP1-209ENST00000461707 RPAP2Q8IXW5 612 aaPredicted RBP9.06□□□□□ -0.96
NPHP1-209ENST00000461707 SSH3Q8TE77 659 aa9.06□□□□□ -0.96
NPHP1-209ENST00000461707 USP26Q9BXU7 913 aa9.06□□□□□ -0.96
NPHP1-209ENST00000461707 DTNBO60941 627 aa9.06□□□□□ -0.96
NPHP1-209ENST00000461707 CDC45O75419 566 aa9.06□□□□□ -0.96
NPHP1-209ENST00000461707 NBPF7P0C2Y1 421 aaPredicted RBP9.06□□□□□ -0.96
NPHP1-209ENST00000461707 HSCBQ8IWL3 235 aa9.06□□□□□ -0.96
NPHP1-209ENST00000461707 TNPO1Q92973 898 aaKnown RBP9.06□□□□□ -0.96
NPHP1-209ENST00000461707 IL1RAPL2Q9NP60 686 aa9.06□□□□□ -0.96
NPHP1-209ENST00000461707 MAP4K4O95819 1239 aaPredicted RBP9.06□□□□□ -0.96
NPHP1-209ENST00000461707 TAF7Q15545 349 aaPredicted RBP9.06□□□□□ -0.96
NPHP1-209ENST00000461707 ANKLE2Q86XL3 938 aa9.06□□□□□ -0.96
NPHP1-209ENST00000461707 PANK2Q9BZ23 570 aa9.06□□□□□ -0.96
NPHP1-209ENST00000461707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.06□□□□□ -0.96
NPHP1-209ENST00000461707 CHPF2Q9P2E5 772 aa9.05□□□□□ -0.96
NPHP1-209ENST00000461707 ATRNO75882 1429 aa9.05□□□□□ -0.96
NPHP1-209ENST00000461707 PI4K2BQ8TCG2 481 aa9.05□□□□□ -0.96
NPHP1-209ENST00000461707 PDE1AP54750 535 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms