RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 TRIM47Q96LD4 638 aa7.68□□□□□ -1.18
BRCA1-206ENST00000461574 BRWD3Q6RI45 1802 aa7.67□□□□□ -1.18
BRCA1-206ENST00000461574 ALDH1A1P00352 501 aa7.67□□□□□ -1.18
BRCA1-206ENST00000461574 ITGAEP38570 1179 aa7.67□□□□□ -1.18
BRCA1-206ENST00000461574 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
BRCA1-206ENST00000461574 RETREG3Q86VR2 466 aa7.67□□□□□ -1.18
BRCA1-206ENST00000461574 FNBP4Q8N3X1 1017 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-206ENST00000461574 ORAI2Q96SN7 254 aa7.67□□□□□ -1.18
BRCA1-206ENST00000461574 PCDHGC3Q9UN70 934 aa7.67□□□□□ -1.18
BRCA1-206ENST00000461574 SOS2Q07890 1332 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-206ENST00000461574 ROCK1Q13464 1354 aa7.67□□□□□ -1.18
BRCA1-206ENST00000461574 LRP5O75197 1615 aa7.67□□□□□ -1.18
BRCA1-206ENST00000461574 NUDT12Q9BQG2 462 aa7.66□□□□□ -1.18
BRCA1-206ENST00000461574 SENP2Q9HC62 589 aa7.66□□□□□ -1.18
BRCA1-206ENST00000461574 NPHP3Q7Z494 1330 aa7.66□□□□□ -1.18
BRCA1-206ENST00000461574 BLMP54132 1417 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-206ENST00000461574 MYOM2P54296 1465 aa7.66□□□□□ -1.18
BRCA1-206ENST00000461574 CDC42BPGQ6DT37 1551 aa7.66□□□□□ -1.18
BRCA1-206ENST00000461574 TERTO14746 1132 aaKnown RBP7.65□□□□□ -1.18
BRCA1-206ENST00000461574 FDX1P10109 184 aa7.65□□□□□ -1.18
BRCA1-206ENST00000461574 ESCO1Q5FWF5 840 aa7.65□□□□□ -1.18
BRCA1-206ENST00000461574 KRI1Q8N9T8 703 aaKnown RBP7.65□□□□□ -1.18
BRCA1-206ENST00000461574 GJD4Q96KN9 370 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-206ENST00000461574 GLI3P10071 1580 aa7.64□□□□□ -1.19
BRCA1-206ENST00000461574 BCL9LQ86UU0 1499 aa7.64□□□□□ -1.19
BRCA1-206ENST00000461574 HFM1A2PYH4 1435 aa7.64□□□□□ -1.19
BRCA1-206ENST00000461574 LRPPRCP42704 1394 aaKnown RBP7.64□□□□□ -1.19
BRCA1-206ENST00000461574 ROBO2Q9HCK4 1378 aa7.64□□□□□ -1.19
BRCA1-206ENST00000461574 C6orf229H3BNL8 230 aa7.64□□□□□ -1.19
BRCA1-206ENST00000461574 SIAH2O43255 324 aa7.64□□□□□ -1.19
BRCA1-206ENST00000461574 WIPF1O43516 503 aa7.64□□□□□ -1.19
BRCA1-206ENST00000461574 XPCQ01831 940 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-206ENST00000461574 VSIG10Q8N0Z9 540 aa7.64□□□□□ -1.19
BRCA1-206ENST00000461574 PPLO60437 1756 aa7.64□□□□□ -1.19
BRCA1-206ENST00000461574 KIF1AQ12756 1690 aa7.63□□□□□ -1.19
BRCA1-206ENST00000461574 PLCH1Q4KWH8 1693 aa7.63□□□□□ -1.19
BRCA1-206ENST00000461574 USP32Q8NFA0 1604 aa7.63□□□□□ -1.19
BRCA1-206ENST00000461574 RALGAPBQ86X10 1494 aa7.63□□□□□ -1.19
BRCA1-206ENST00000461574 PXDNQ92626 1479 aa7.63□□□□□ -1.19
BRCA1-206ENST00000461574 DEFB132Q7Z7B7 95 aa7.63□□□□□ -1.19
BRCA1-206ENST00000461574 EHBP1Q8NDI1 1231 aa7.63□□□□□ -1.19
BRCA1-206ENST00000461574 CCDC9Q9Y3X0 531 aaKnown RBP7.63□□□□□ -1.19
BRCA1-206ENST00000461574 FOXO3O43524 673 aa7.62□□□□□ -1.19
BRCA1-206ENST00000461574 SSTR3P32745 418 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-206ENST00000461574 SH3BP2P78314 561 aa7.62□□□□□ -1.19
BRCA1-206ENST00000461574 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.62□□□□□ -1.19
BRCA1-206ENST00000461574 SPIRE2Q8WWL2 714 aa7.62□□□□□ -1.19
BRCA1-206ENST00000461574 KIFC2Q96AC6 838 aa7.62□□□□□ -1.19
BRCA1-206ENST00000461574 NWD2Q9ULI1 1742 aa7.61□□□□□ -1.19
BRCA1-206ENST00000461574 CCNYL3P0C7X3 344 aa7.61□□□□□ -1.19
BRCA1-206ENST00000461574 MS4A1P11836 297 aa7.61□□□□□ -1.19
BRCA1-206ENST00000461574 NDUFV2P19404 249 aa7.61□□□□□ -1.19
BRCA1-206ENST00000461574 UNC5CLQ8IV45 518 aa7.61□□□□□ -1.19
BRCA1-206ENST00000461574 RGPD1P0DJD0 1748 aa7.61□□□□□ -1.19
BRCA1-206ENST00000461574 FMN2Q9NZ56 1722 aa7.61□□□□□ -1.19
BRCA1-206ENST00000461574 IFT172Q9UG01 1749 aa7.61□□□□□ -1.19
BRCA1-206ENST00000461574 PRAG1Q86YV5 1406 aa7.61□□□□□ -1.19
BRCA1-206ENST00000461574 BMP1P13497 986 aa7.6□□□□□ -1.19
BRCA1-206ENST00000461574 BAG6P46379 1132 aa7.6□□□□□ -1.19
BRCA1-206ENST00000461574 STK17AQ9UEE5 414 aa7.6□□□□□ -1.19
BRCA1-206ENST00000461574 SLIT2O94813 1529 aa7.6□□□□□ -1.19
BRCA1-206ENST00000461574 KNDC1Q76NI1 1749 aa7.6□□□□□ -1.19
BRCA1-206ENST00000461574 ABCA3Q99758 1704 aa7.6□□□□□ -1.19
BRCA1-206ENST00000461574 CCDC144AA2RUR9 1427 aa7.6□□□□□ -1.19
BRCA1-206ENST00000461574 NAIPQ13075 1403 aa7.6□□□□□ -1.19
BRCA1-206ENST00000461574 RGPD8O14715 1765 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-206ENST00000461574 MOXD2PA6NHM9 499 aa7.59□□□□□ -1.19
BRCA1-206ENST00000461574 CAPN5O15484 640 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-206ENST00000461574 INSM1Q01101 510 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-206ENST00000461574 LINC01559Q495D7 138 aa7.59□□□□□ -1.19
BRCA1-206ENST00000461574 TRIM46Q7Z4K8 759 aa7.59□□□□□ -1.19
BRCA1-206ENST00000461574 SEPT12Q8IYM1 358 aa7.59□□□□□ -1.19
BRCA1-206ENST00000461574 WASF2Q9Y6W5 498 aa7.59□□□□□ -1.19
BRCA1-206ENST00000461574 PTPRNQ16849 979 aa7.58□□□□□ -1.2
BRCA1-206ENST00000461574 KRT27Q7Z3Y8 459 aa7.58□□□□□ -1.2
BRCA1-206ENST00000461574 BAP1Q92560 729 aa7.58□□□□□ -1.2
BRCA1-206ENST00000461574 UNC93B1Q9H1C4 597 aa7.58□□□□□ -1.2
BRCA1-206ENST00000461574 EVA1BQ9NVM1 165 aa7.58□□□□□ -1.2
BRCA1-206ENST00000461574 STK26Q9P289 416 aa7.58□□□□□ -1.2
BRCA1-206ENST00000461574 SPATA31A3Q5VYP0 1347 aa7.57□□□□□ -1.2
BRCA1-206ENST00000461574 RPGRIP1LQ68CZ1 1315 aa7.57□□□□□ -1.2
BRCA1-206ENST00000461574 TTLL12Q14166 644 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-206ENST00000461574 PRR7Q8TB68 274 aa7.57□□□□□ -1.2
BRCA1-206ENST00000461574 TNS3Q68CZ2 1445 aa7.57□□□□□ -1.2
BRCA1-206ENST00000461574 ADGRB2O60241 1585 aa7.57□□□□□ -1.2
BRCA1-206ENST00000461574 NRAPQ86VF7 1730 aa7.56□□□□□ -1.2
BRCA1-206ENST00000461574 HRCP23327 699 aa7.56□□□□□ -1.2
BRCA1-206ENST00000461574 PSME1Q06323 249 aa7.56□□□□□ -1.2
BRCA1-206ENST00000461574 KCNH2Q12809 1159 aa7.56□□□□□ -1.2
BRCA1-206ENST00000461574 VPS72Q15906 364 aa7.56□□□□□ -1.2
BRCA1-206ENST00000461574 KRT28Q7Z3Y7 464 aa7.56□□□□□ -1.2
BRCA1-206ENST00000461574 TLL2Q9Y6L7 1015 aa7.56□□□□□ -1.2
BRCA1-206ENST00000461574 TNS1Q9HBL0 1735 aaKnown RBP7.55□□□□□ -1.2
BRCA1-206ENST00000461574 RRBP1Q9P2E9 1410 aaKnown RBP7.55□□□□□ -1.2
BRCA1-206ENST00000461574 BARGINQ6ZT62 677 aa7.55□□□□□ -1.2
BRCA1-206ENST00000461574 WAPLQ7Z5K2 1190 aa7.55□□□□□ -1.2
BRCA1-206ENST00000461574 CABLES1Q8TDN4 633 aa7.55□□□□□ -1.2
BRCA1-206ENST00000461574 NXF1Q9UBU9 619 aaKnown RBP7.55□□□□□ -1.2
BRCA1-206ENST00000461574 ARHGEF10O15013 1369 aa7.55□□□□□ -1.2
BRCA1-206ENST00000461574 TECPR2O15040 1411 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms