RNA–Protein interactions for RNA: ENST00000461490.1

PDE6B-204, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-204ENST00000461490 NBPF4Q96M43 638 aa9.4□□□□□ -0.9
PDE6B-204ENST00000461490 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.9
PDE6B-204ENST00000461490 HMGB2P26583 209 aaKnown RBP9.39□□□□□ -0.91
PDE6B-204ENST00000461490 HSP90AB2PQ58FF8 381 aa9.39□□□□□ -0.91
PDE6B-204ENST00000461490 PTCD2Q8WV60 388 aaKnown RBP9.39□□□□□ -0.91
PDE6B-204ENST00000461490 NSD3Q9BZ95 1437 aa9.39□□□□□ -0.91
PDE6B-204ENST00000461490 TUBGCP6Q96RT7 1819 aa9.38□□□□□ -0.91
PDE6B-204ENST00000461490 MEGF6O75095 1541 aa9.38□□□□□ -0.91
PDE6B-204ENST00000461490 TMC2Q8TDI7 906 aa9.38□□□□□ -0.91
PDE6B-204ENST00000461490 RAPGEF4Q8WZA2 1011 aa9.38□□□□□ -0.91
PDE6B-204ENST00000461490 LRRC4BQ9NT99 713 aa9.38□□□□□ -0.91
PDE6B-204ENST00000461490 EMILIN1Q9Y6C2 1016 aa9.38□□□□□ -0.91
PDE6B-204ENST00000461490 SMG6Q86US8 1419 aaKnown RBP9.38□□□□□ -0.91
PDE6B-204ENST00000461490 ITGB4P16144 1822 aa9.38□□□□□ -0.91
PDE6B-204ENST00000461490 TATP17735 454 aaPredicted RBP9.37□□□□□ -0.91
PDE6B-204ENST00000461490 TNNT2P45379 298 aaPredicted RBP9.37□□□□□ -0.91
PDE6B-204ENST00000461490 ZNF827Q17R98 1081 aa9.37□□□□□ -0.91
PDE6B-204ENST00000461490 MFRPQ9BY79 579 aa9.37□□□□□ -0.91
PDE6B-204ENST00000461490 RTL1A6NKG5 1358 aa9.37□□□□□ -0.91
PDE6B-204ENST00000461490 LY75O60449 1722 aa9.36□□□□□ -0.91
PDE6B-204ENST00000461490 CGNL1Q0VF96 1302 aa9.36□□□□□ -0.91
PDE6B-204ENST00000461490 HSPA5P11021 654 aaKnown RBP9.36□□□□□ -0.91
PDE6B-204ENST00000461490 KCNK17Q96T54 332 aa9.36□□□□□ -0.91
PDE6B-204ENST00000461490 FLT4P35916 1363 aa9.36□□□□□ -0.91
PDE6B-204ENST00000461490 KIF24Q5T7B8 1368 aa9.36□□□□□ -0.91
PDE6B-204ENST00000461490 PAPPAQ13219 1627 aa9.35□□□□□ -0.91
PDE6B-204ENST00000461490 EIF4G2P78344 907 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDE6B-204ENST00000461490 SLC4A5Q9BY07 1137 aa9.35□□□□□ -0.91
PDE6B-204ENST00000461490 ANKRD26Q9UPS8 1709 aa9.35□□□□□ -0.91
PDE6B-204ENST00000461490 INSRP06213 1382 aa9.35□□□□□ -0.91
PDE6B-204ENST00000461490 BHMG1C9JSJ3 638 aaPredicted RBP9.34□□□□□ -0.91
PDE6B-204ENST00000461490 YY1P25490 414 aa9.34□□□□□ -0.91
PDE6B-204ENST00000461490 SLC27A3Q5K4L6 730 aa9.34□□□□□ -0.91
PDE6B-204ENST00000461490 MTFR1LQ9H019 292 aa9.34□□□□□ -0.91
PDE6B-204ENST00000461490 TFCP2L1Q9NZI6 479 aa9.34□□□□□ -0.91
PDE6B-204ENST00000461490 CHD4Q14839 1912 aa9.34□□□□□ -0.91
PDE6B-204ENST00000461490 QSER1Q2KHR3 1735 aa9.34□□□□□ -0.92
PDE6B-204ENST00000461490 TAF1LQ8IZX4 1826 aa9.33□□□□□ -0.92
PDE6B-204ENST00000461490 LCE2BO14633 110 aa9.33□□□□□ -0.92
PDE6B-204ENST00000461490 MPRIPQ6WCQ1 1025 aa9.33□□□□□ -0.92
PDE6B-204ENST00000461490 FHDC1Q9C0D6 1143 aaPredicted RBP9.33□□□□□ -0.92
PDE6B-204ENST00000461490 PANK3Q9H999 370 aa9.33□□□□□ -0.92
PDE6B-204ENST00000461490 CCNL1Q9UK58 526 aaPredicted RBP9.33□□□□□ -0.92
PDE6B-204ENST00000461490 NSD2O96028 1365 aa9.33□□□□□ -0.92
PDE6B-204ENST00000461490 TOGARAM1Q9Y4F4 1720 aa9.32□□□□□ -0.92
PDE6B-204ENST00000461490 ARXQ96QS3 562 aa9.32□□□□□ -0.92
PDE6B-204ENST00000461490 EYA1Q99502 592 aa9.32□□□□□ -0.92
PDE6B-204ENST00000461490 SYT17Q9BSW7 474 aa9.32□□□□□ -0.92
PDE6B-204ENST00000461490 POLKQ9UBT6 870 aa9.32□□□□□ -0.92
PDE6B-204ENST00000461490 PCDH11XQ9BZA7 1347 aa9.31□□□□□ -0.92
PDE6B-204ENST00000461490 PCDH11YQ9BZA8 1340 aa9.31□□□□□ -0.92
PDE6B-204ENST00000461490 PKD1L3Q7Z443 1732 aa9.31□□□□□ -0.92
PDE6B-204ENST00000461490 CYP27B1O15528 508 aa9.31□□□□□ -0.92
PDE6B-204ENST00000461490 C5P01031 1676 aa9.31□□□□□ -0.92
PDE6B-204ENST00000461490 WASHC2AQ641Q2 1341 aa9.31□□□□□ -0.92
PDE6B-204ENST00000461490 PNPLA7Q6ZV29 1317 aa9.31□□□□□ -0.92
PDE6B-204ENST00000461490 ITGBL1O95965 494 aaPredicted RBP9.3□□□□□ -0.92
PDE6B-204ENST00000461490 LAPTM4AQ15012 233 aa9.3□□□□□ -0.92
PDE6B-204ENST00000461490 WNT2BQ93097 391 aa9.3□□□□□ -0.92
PDE6B-204ENST00000461490 SPG7Q9UQ90 795 aa9.3□□□□□ -0.92
PDE6B-204ENST00000461490 POLD1P28340 1107 aa9.29□□□□□ -0.92
PDE6B-204ENST00000461490 EIF4A2Q14240 407 aaKnown RBP9.29□□□□□ -0.92
PDE6B-204ENST00000461490 MSL1Q68DK7 614 aa9.29□□□□□ -0.92
PDE6B-204ENST00000461490 COL23A1Q86Y22 540 aaPredicted RBP9.29□□□□□ -0.92
PDE6B-204ENST00000461490 SLC16A10Q8TF71 515 aa9.29□□□□□ -0.92
PDE6B-204ENST00000461490 PALLDQ8WX93 1383 aa9.28□□□□□ -0.92
PDE6B-204ENST00000461490 GOLGA8CPA6NN73 597 aa9.28□□□□□ -0.92
PDE6B-204ENST00000461490 CNGB1Q14028 1251 aaPredicted RBP9.28□□□□□ -0.92
PDE6B-204ENST00000461490 SMIM5Q71RC9 77 aa9.28□□□□□ -0.92
PDE6B-204ENST00000461490 MORC1Q86VD1 984 aa9.28□□□□□ -0.92
PDE6B-204ENST00000461490 PIGBQ92521 554 aa9.28□□□□□ -0.92
PDE6B-204ENST00000461490 VIRMAQ69YN4 1812 aaKnown RBP9.28□□□□□ -0.92
PDE6B-204ENST00000461490 GPR162Q16538 588 aa9.27□□□□□ -0.93
PDE6B-204ENST00000461490 TRAF7Q6Q0C0 670 aa9.27□□□□□ -0.93
PDE6B-204ENST00000461490 KNSTRNQ9Y448 316 aa9.27□□□□□ -0.93
PDE6B-204ENST00000461490 COL24A1Q17RW2 1714 aa9.27□□□□□ -0.93
PDE6B-204ENST00000461490 UBR3Q6ZT12 1888 aa9.27□□□□□ -0.93
PDE6B-204ENST00000461490 C4BP0C0L5 1744 aa9.26□□□□□ -0.93
PDE6B-204ENST00000461490 PHF14O94880 888 aa9.26□□□□□ -0.93
PDE6B-204ENST00000461490 PHKG2P15735 406 aa9.26□□□□□ -0.93
PDE6B-204ENST00000461490 IFNL2Q8IZJ0 200 aa9.26□□□□□ -0.93
PDE6B-204ENST00000461490 SMARCC1Q92922 1105 aaPredicted RBP9.26□□□□□ -0.93
PDE6B-204ENST00000461490 TMOD3Q9NYL9 352 aa9.26□□□□□ -0.93
PDE6B-204ENST00000461490 ASAP1Q9ULH1 1129 aa9.26□□□□□ -0.93
PDE6B-204ENST00000461490 UTRNP46939 3433 aa9.25□□□□□ -0.93
PDE6B-204ENST00000461490 NCAPD2Q15021 1401 aa9.25□□□□□ -0.93
PDE6B-204ENST00000461490 NKX1-1Q15270 411 aaPredicted RBP9.25□□□□□ -0.93
PDE6B-204ENST00000461490 FLAD1Q8NFF5 587 aa9.25□□□□□ -0.93
PDE6B-204ENST00000461490 NLGN2Q8NFZ4 835 aa9.25□□□□□ -0.93
PDE6B-204ENST00000461490 AK7Q96M32 723 aa9.25□□□□□ -0.93
PDE6B-204ENST00000461490 PLEKHG2Q9H7P9 1386 aa9.24□□□□□ -0.93
PDE6B-204ENST00000461490 LOC102724428A0A0B4J2F2 783 aa9.24□□□□□ -0.93
PDE6B-204ENST00000461490 ATP6V1AP38606 617 aa9.24□□□□□ -0.93
PDE6B-204ENST00000461490 SIK1P57059 783 aa9.24□□□□□ -0.93
PDE6B-204ENST00000461490 PLEKHO1Q53GL0 409 aaPredicted RBP9.24□□□□□ -0.93
PDE6B-204ENST00000461490 AMIGO3Q86WK7 504 aa9.24□□□□□ -0.93
PDE6B-204ENST00000461490 MRPL50Q8N5N7 158 aaKnown RBP9.24□□□□□ -0.93
PDE6B-204ENST00000461490 BCL2L12Q9HB09 334 aa9.24□□□□□ -0.93
PDE6B-204ENST00000461490 STK24Q9Y6E0 443 aa9.24□□□□□ -0.93
PDE6B-204ENST00000461490 TBC1D12O60347 775 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms