RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 CABP1Q9NZU7 370 aa8.73□□□□□ -1.01
COL21A1-205ENST00000461489 ATXN7O15265 892 aaPredicted RBP8.72□□□□□ -1.01
COL21A1-205ENST00000461489 TATP17735 454 aaPredicted RBP8.72□□□□□ -1.01
COL21A1-205ENST00000461489 SNRPNP63162 240 aaKnown RBP8.72□□□□□ -1.01
COL21A1-205ENST00000461489 GTF2IP78347 998 aa8.72□□□□□ -1.01
COL21A1-205ENST00000461489 MTFR1Q15390 333 aa8.72□□□□□ -1.01
COL21A1-205ENST00000461489 C1orf229Q6ZS94 237 aaPredicted RBP8.72□□□□□ -1.01
COL21A1-205ENST00000461489 DNAAF2Q9NVR5 837 aaKnown RBP8.72□□□□□ -1.01
COL21A1-205ENST00000461489 A0A1W2PNR3 127 aa8.71□□□□□ -1.02
COL21A1-205ENST00000461489 BACH1O14867 736 aa8.71□□□□□ -1.02
COL21A1-205ENST00000461489 LZTS3O60299 673 aaPredicted RBP8.71□□□□□ -1.02
COL21A1-205ENST00000461489 AMPD1P23109 780 aa8.71□□□□□ -1.02
COL21A1-205ENST00000461489 PLA2G4EQ3MJ16 856 aa8.71□□□□□ -1.02
COL21A1-205ENST00000461489 SLCO4C1Q6ZQN7 724 aa8.71□□□□□ -1.02
COL21A1-205ENST00000461489 NFATC2IPQ8NCF5 419 aa8.71□□□□□ -1.02
COL21A1-205ENST00000461489 GGA1Q9UJY5 639 aa8.71□□□□□ -1.02
COL21A1-205ENST00000461489 MKL2Q9ULH7 1088 aa8.71□□□□□ -1.02
COL21A1-205ENST00000461489 IQSEC3Q9UPP2 1182 aaPredicted RBP8.71□□□□□ -1.02
COL21A1-205ENST00000461489 GJA3Q9Y6H8 435 aa8.71□□□□□ -1.02
COL21A1-205ENST00000461489 USP3Q9Y6I4 520 aa8.71□□□□□ -1.02
COL21A1-205ENST00000461489 NCOA4Q13772 614 aa8.7□□□□□ -1.02
COL21A1-205ENST00000461489 ZNF295-AS1Q8N0V1 137 aa8.7□□□□□ -1.02
COL21A1-205ENST00000461489 DCDC2BA2VCK2 349 aa8.69□□□□□ -1.02
COL21A1-205ENST00000461489 MSTNO14793 375 aa8.69□□□□□ -1.02
COL21A1-205ENST00000461489 DEPDC4Q8N2C3 294 aa8.69□□□□□ -1.02
COL21A1-205ENST00000461489 ZDHHC3Q9NYG2 299 aa8.69□□□□□ -1.02
COL21A1-205ENST00000461489 PARP3Q9Y6F1 533 aa8.69□□□□□ -1.02
COL21A1-205ENST00000461489 USP17L5A8MUK1 530 aa8.68□□□□□ -1.02
COL21A1-205ENST00000461489 KHNYNO15037 678 aaKnown RBP8.68□□□□□ -1.02
COL21A1-205ENST00000461489 ARAFP10398 606 aa8.68□□□□□ -1.02
COL21A1-205ENST00000461489 UBTFP17480 764 aaKnown RBP8.68□□□□□ -1.02
COL21A1-205ENST00000461489 FLIIQ13045 1269 aa8.68□□□□□ -1.02
COL21A1-205ENST00000461489 BICDL1Q6ZP65 573 aa8.68□□□□□ -1.02
COL21A1-205ENST00000461489 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.68□□□□□ -1.02
COL21A1-205ENST00000461489 ZNF358Q9NW07 568 aa8.68□□□□□ -1.02
COL21A1-205ENST00000461489 NEURL1BA8MQ27 555 aa8.67□□□□□ -1.02
COL21A1-205ENST00000461489 MAPTP10636 758 aaKnown RBP8.67□□□□□ -1.02
COL21A1-205ENST00000461489 TNP2Q05952 138 aa8.67□□□□□ -1.02
COL21A1-205ENST00000461489 ZIC5Q96T25 663 aa8.67□□□□□ -1.02
COL21A1-205ENST00000461489 SCHIP1Q9P0W5 487 aaPredicted RBP8.67□□□□□ -1.02
COL21A1-205ENST00000461489 LOC100996750A0A140TA64 210 aa8.66□□□□□ -1.02
COL21A1-205ENST00000461489 POM121CA8CG34 1229 aa8.66□□□□□ -1.02
COL21A1-205ENST00000461489 CD33P20138 364 aa8.66□□□□□ -1.02
COL21A1-205ENST00000461489 SPOCK3Q9BQ16 436 aa8.66□□□□□ -1.02
COL21A1-205ENST00000461489 KRTAP4-6Q9BYQ5 205 aa8.66□□□□□ -1.02
COL21A1-205ENST00000461489 EPXP11678 715 aa8.65□□□□□ -1.02
COL21A1-205ENST00000461489 TRIM50Q86XT4 487 aa8.65□□□□□ -1.02
COL21A1-205ENST00000461489 BTBD6Q96KE9 485 aa8.65□□□□□ -1.02
COL21A1-205ENST00000461489 ITGB2P05107 769 aa8.64□□□□□ -1.03
COL21A1-205ENST00000461489 FAM157BP0CG42 384 aa8.64□□□□□ -1.03
COL21A1-205ENST00000461489 ADH6P28332 368 aa8.64□□□□□ -1.03
COL21A1-205ENST00000461489 TXLNAP40222 546 aa8.64□□□□□ -1.03
COL21A1-205ENST00000461489 FAM182BQ5T319 152 aa8.64□□□□□ -1.03
COL21A1-205ENST00000461489 ZDHHC1Q8WTX9 485 aa8.64□□□□□ -1.03
COL21A1-205ENST00000461489 L3MBTL2Q969R5 705 aa8.64□□□□□ -1.03
COL21A1-205ENST00000461489 ZNF232Q9UNY5 417 aa8.64□□□□□ -1.03
COL21A1-205ENST00000461489 PIK3R2O00459 728 aa8.63□□□□□ -1.03
COL21A1-205ENST00000461489 GRIN2CQ14957 1233 aa8.63□□□□□ -1.03
COL21A1-205ENST00000461489 TEAD4Q15561 434 aa8.63□□□□□ -1.03
COL21A1-205ENST00000461489 TBCELQ5QJ74 424 aa8.63□□□□□ -1.03
COL21A1-205ENST00000461489 ALYREFQ86V81 257 aaKnown RBP8.63□□□□□ -1.03
COL21A1-205ENST00000461489 SLC9A9Q8IVB4 645 aa8.63□□□□□ -1.03
COL21A1-205ENST00000461489 TNS4Q8IZW8 715 aa8.63□□□□□ -1.03
COL21A1-205ENST00000461489 TPCN2Q8NHX9 752 aa8.63□□□□□ -1.03
COL21A1-205ENST00000461489 ADAMTS19Q8TE59 1207 aa8.63□□□□□ -1.03
COL21A1-205ENST00000461489 PRR12Q9ULL5 1215 aa8.63□□□□□ -1.03
COL21A1-205ENST00000461489 USP17L3A6NCW0 530 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 USP17L4A6NCW7 530 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 COL8A1P27658 744 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 NOS2P35228 1153 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 ATP1A2P50993 1020 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 SAMD5Q5TGI4 173 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 HDGFL1Q5TGJ6 251 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 USP17L2Q6R6M4 530 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 LINC00114Q6XXX2 140 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 USP17L1Q7RTZ2 530 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 NEUROD4Q9HD90 331 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 HCN2Q9UL51 889 aa8.62□□□□□ -1.03
COL21A1-205ENST00000461489 KRBA1A5PL33 1030 aa8.61□□□□□ -1.03
COL21A1-205ENST00000461489 GNB5O14775 395 aa8.61□□□□□ -1.03
COL21A1-205ENST00000461489 HOXB4P17483 251 aaPredicted RBP8.61□□□□□ -1.03
COL21A1-205ENST00000461489 EPHA4P54764 986 aa8.61□□□□□ -1.03
COL21A1-205ENST00000461489 PLEKHM2Q8IWE5 1019 aa8.61□□□□□ -1.03
COL21A1-205ENST00000461489 SUV39H2Q9H5I1 410 aa8.61□□□□□ -1.03
COL21A1-205ENST00000461489 AVENQ9NQS1 362 aaPredicted RBP8.61□□□□□ -1.03
COL21A1-205ENST00000461489 MARK1Q9P0L2 795 aa8.61□□□□□ -1.03
COL21A1-205ENST00000461489 SERTM1A2A2V5 107 aa8.6□□□□□ -1.03
COL21A1-205ENST00000461489 PROCP04070 461 aa8.6□□□□□ -1.03
COL21A1-205ENST00000461489 PCBP4P57723 403 aaKnown RBP8.6□□□□□ -1.03
COL21A1-205ENST00000461489 LAMC2Q13753 1193 aa8.6□□□□□ -1.03
COL21A1-205ENST00000461489 CCDC102BQ68D86 513 aa8.6□□□□□ -1.03
COL21A1-205ENST00000461489 LRRC69Q6ZNQ3 347 aa8.6□□□□□ -1.03
COL21A1-205ENST00000461489 CHSY3Q70JA7 882 aa8.6□□□□□ -1.03
COL21A1-205ENST00000461489 STRN4Q9NRL3 753 aa8.6□□□□□ -1.03
COL21A1-205ENST00000461489 KLF15Q9UIH9 416 aa8.6□□□□□ -1.03
COL21A1-205ENST00000461489 KIAA1024Q9UPX6 916 aa8.6□□□□□ -1.03
COL21A1-205ENST00000461489 ATP9BO43861 1147 aa8.59□□□□□ -1.03
COL21A1-205ENST00000461489 DGKGP49619 791 aa8.59□□□□□ -1.03
COL21A1-205ENST00000461489 ZNF468Q5VIY5 522 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-205ENST00000461489 FCHSD1Q86WN1 690 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms