RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 COL15A1P39059 1388 aa20.72■□□□□ 0.91
NUP50-213ENST00000461437 A0A0G2JLW4 131 aa20.71■□□□□ 0.91
NUP50-213ENST00000461437 GRIN3BO60391 1043 aa20.71■□□□□ 0.91
NUP50-213ENST00000461437 DDX10Q13206 875 aaKnown RBP20.71■□□□□ 0.91
NUP50-213ENST00000461437 ZNF790Q6PG37 636 aa20.71■□□□□ 0.91
NUP50-213ENST00000461437 PARP3Q9Y6F1 533 aa20.71■□□□□ 0.91
NUP50-213ENST00000461437 HEG1Q9ULI3 1381 aa20.71■□□□□ 0.91
NUP50-213ENST00000461437 FCHSD2O94868 740 aa20.69■□□□□ 0.9
NUP50-213ENST00000461437 VSIG10Q8N0Z9 540 aa20.69■□□□□ 0.9
NUP50-213ENST00000461437 PRAMEF22A3QJZ6 481 aa20.68■□□□□ 0.9
NUP50-213ENST00000461437 BTBD11A6QL63 1104 aa20.68■□□□□ 0.9
NUP50-213ENST00000461437 ZPR1O75312 459 aa20.68■□□□□ 0.9
NUP50-213ENST00000461437 DPEP1P16444 411 aa20.68■□□□□ 0.9
NUP50-213ENST00000461437 ZNF330Q9Y3S2 320 aaPredicted RBP20.68■□□□□ 0.9
NUP50-213ENST00000461437 SENP3-EIF4A1A0A087X0R7 540 aa20.67■□□□□ 0.9
NUP50-213ENST00000461437 PIP4K2AP48426 406 aaPredicted RBP20.67■□□□□ 0.9
NUP50-213ENST00000461437 C1QTNF8P60827 252 aa20.67■□□□□ 0.9
NUP50-213ENST00000461437 BCL2L12Q9HB09 334 aa20.67■□□□□ 0.9
NUP50-213ENST00000461437 RTF1Q92541 710 aaKnown RBP20.66■□□□□ 0.9
NUP50-213ENST00000461437 NARFQ9UHQ1 456 aa20.66■□□□□ 0.9
NUP50-213ENST00000461437 SCN7AQ01118 1682 aa20.66■□□□□ 0.9
NUP50-213ENST00000461437 POLRMTO00411 1230 aaKnown RBP20.65■□□□□ 0.9
NUP50-213ENST00000461437 A1BGP04217 495 aa20.65■□□□□ 0.9
NUP50-213ENST00000461437 TM4SF1P30408 202 aa20.65■□□□□ 0.9
NUP50-213ENST00000461437 BCS1LQ9Y276 419 aa20.65■□□□□ 0.9
NUP50-213ENST00000461437 NRXN2Q9P2S2 1712 aa20.64■□□□□ 0.9
NUP50-213ENST00000461437 NFIXQ14938 502 aa20.64■□□□□ 0.89
NUP50-213ENST00000461437 FMNL2Q96PY5 1086 aa20.64■□□□□ 0.89
NUP50-213ENST00000461437 MIS18AQ9NYP9 233 aa20.64■□□□□ 0.89
NUP50-213ENST00000461437 ARFGEF1Q9Y6D6 1849 aa20.64■□□□□ 0.89
NUP50-213ENST00000461437 STARD3NLO95772 234 aa20.63■□□□□ 0.89
NUP50-213ENST00000461437 CHRNA5P30532 468 aa20.63■□□□□ 0.89
NUP50-213ENST00000461437 TGFB2P61812 414 aa20.63■□□□□ 0.89
NUP50-213ENST00000461437 BICDL1Q6ZP65 573 aa20.63■□□□□ 0.89
NUP50-213ENST00000461437 USP16Q9Y5T5 823 aa20.63■□□□□ 0.89
NUP50-213ENST00000461437 ATP10DQ9P241 1426 aa20.62■□□□□ 0.89
NUP50-213ENST00000461437 BCORQ6W2J9 1755 aa20.62■□□□□ 0.89
NUP50-213ENST00000461437 KDM3BQ7LBC6 1761 aa20.62■□□□□ 0.89
NUP50-213ENST00000461437 KCNA3P22001 575 aa20.62■□□□□ 0.89
NUP50-213ENST00000461437 EIF5P55010 431 aaKnown RBP20.62■□□□□ 0.89
NUP50-213ENST00000461437 PLEKHF1Q96S99 279 aa20.62■□□□□ 0.89
NUP50-213ENST00000461437 THUMPD2Q9BTF0 503 aaKnown RBP20.62■□□□□ 0.89
NUP50-213ENST00000461437 TBC1D2BQ9UPU7 963 aa20.62■□□□□ 0.89
NUP50-213ENST00000461437 ANKRD31Q8N7Z5 1873 aa20.61■□□□□ 0.89
NUP50-213ENST00000461437 ZNF526Q8TF50 670 aaPredicted RBP20.61■□□□□ 0.89
NUP50-213ENST00000461437 CARMIL3Q8ND23 1372 aa20.6■□□□□ 0.89
NUP50-213ENST00000461437 LAMB4A4D0S4 1761 aa20.59■□□□□ 0.89
NUP50-213ENST00000461437 DLEC1Q9Y238 1755 aa20.59■□□□□ 0.89
NUP50-213ENST00000461437 SERPINB2P05120 415 aa20.58■□□□□ 0.89
NUP50-213ENST00000461437 TBC1D9BQ66K14 1250 aa20.58■□□□□ 0.89
NUP50-213ENST00000461437 CCDC24Q8N4L8 307 aa20.58■□□□□ 0.89
NUP50-213ENST00000461437 TEX13AQ9BXU3 409 aaPredicted RBP20.58■□□□□ 0.89
NUP50-213ENST00000461437 CACNA1SQ13698 1873 aa20.58■□□□□ 0.88
NUP50-213ENST00000461437 ADCY9O60503 1353 aa20.58■□□□□ 0.88
NUP50-213ENST00000461437 RALBP1Q15311 655 aa20.57■□□□□ 0.88
NUP50-213ENST00000461437 NFE2L2Q16236 605 aa20.57■□□□□ 0.88
NUP50-213ENST00000461437 HTATSF1O43719 755 aaKnown RBP20.56■□□□□ 0.88
NUP50-213ENST00000461437 GIGYF1O75420 1035 aaPredicted RBP20.56■□□□□ 0.88
NUP50-213ENST00000461437 NEFMP07197 916 aa20.56■□□□□ 0.88
NUP50-213ENST00000461437 IL6STP40189 918 aaPredicted RBP20.56■□□□□ 0.88
NUP50-213ENST00000461437 TAF7Q15545 349 aaPredicted RBP20.56■□□□□ 0.88
NUP50-213ENST00000461437 ARHGAP27Q6ZUM4 889 aa20.56■□□□□ 0.88
NUP50-213ENST00000461437 COL11A2P13942 1736 aaPredicted RBP20.56■□□□□ 0.88
NUP50-213ENST00000461437 MAPK8IP3Q9UPT6 1336 aa20.55■□□□□ 0.88
NUP50-213ENST00000461437 A0A087WZG4 1122 aa20.55■□□□□ 0.88
NUP50-213ENST00000461437 SBF1O95248 1867 aa20.54■□□□□ 0.88
NUP50-213ENST00000461437 CAMTA2O94983 1202 aa20.54■□□□□ 0.88
NUP50-213ENST00000461437 SNRPA1P09661 255 aaKnown RBP20.54■□□□□ 0.88
NUP50-213ENST00000461437 CCDC146Q8IYE0 955 aa20.54■□□□□ 0.88
NUP50-213ENST00000461437 PIM2Q9P1W9 311 aa20.54■□□□□ 0.88
NUP50-213ENST00000461437 CCDC88AQ3V6T2 1871 aa20.54■□□□□ 0.88
NUP50-213ENST00000461437 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
NUP50-213ENST00000461437 NBPF26B4DH59 902 aa20.53■□□□□ 0.88
NUP50-213ENST00000461437 NBPF10Q6P3W6 841 aaKnown RBP20.53■□□□□ 0.88
NUP50-213ENST00000461437 DZIP3Q86Y13 1208 aaKnown RBP20.53■□□□□ 0.88
NUP50-213ENST00000461437 NBPF15Q8N660 670 aa20.53■□□□□ 0.88
NUP50-213ENST00000461437 RRP7AQ9Y3A4 280 aaKnown RBP20.52■□□□□ 0.88
NUP50-213ENST00000461437 DALRD3Q5D0E6 543 aaKnown RBP20.51■□□□□ 0.87
NUP50-213ENST00000461437 NPM2Q86SE8 214 aaKnown RBP20.5■□□□□ 0.87
NUP50-213ENST00000461437 PRR5LQ6MZQ0 368 aa20.49■□□□□ 0.87
NUP50-213ENST00000461437 C2CD5Q86YS7 1000 aa20.49■□□□□ 0.87
NUP50-213ENST00000461437 NGEFQ8N5V2 710 aa20.49■□□□□ 0.87
NUP50-213ENST00000461437 GPBP1L1Q9HC44 474 aaPredicted RBP20.49■□□□□ 0.87
NUP50-213ENST00000461437 NUP98P52948 1817 aa20.48■□□□□ 0.87
NUP50-213ENST00000461437 RIPK4P57078 832 aa20.48■□□□□ 0.87
NUP50-213ENST00000461437 EIF4A1P60842 406 aaKnown RBP20.47■□□□□ 0.87
NUP50-213ENST00000461437 RASSF7Q02833 373 aa20.47■□□□□ 0.87
NUP50-213ENST00000461437 NEUROD2Q15784 382 aa20.47■□□□□ 0.87
NUP50-213ENST00000461437 CEP350Q5VT06 3117 aa20.47■□□□□ 0.87
NUP50-213ENST00000461437 TMPOP42166 694 aaKnown RBP20.46■□□□□ 0.87
NUP50-213ENST00000461437 C9orf131Q5VYM1 1079 aa20.46■□□□□ 0.87
NUP50-213ENST00000461437 PNNQ9H307 717 aaKnown RBP20.46■□□□□ 0.87
NUP50-213ENST00000461437 FAM177BA6PVY3 158 aa20.45■□□□□ 0.86
NUP50-213ENST00000461437 HLFQ16534 295 aa20.45■□□□□ 0.86
NUP50-213ENST00000461437 PNISRQ8TF01 805 aaKnown RBP20.45■□□□□ 0.86
NUP50-213ENST00000461437 SETDB2Q96T68 719 aa20.45■□□□□ 0.86
NUP50-213ENST00000461437 ZNF219Q9P2Y4 722 aaPredicted RBP20.45■□□□□ 0.86
NUP50-213ENST00000461437 SLX4Q8IY92 1834 aa20.45■□□□□ 0.86
NUP50-213ENST00000461437 MYL6BP14649 208 aa20.44■□□□□ 0.86
NUP50-213ENST00000461437 PRKRIP1Q9H875 184 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms