RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RNF217Q8TC41 542 aa5.31□□□□□ -1.56
VCL-203ENST00000461383 CHMP7Q8WUX9 453 aaPredicted RBP5.31□□□□□ -1.56
VCL-203ENST00000461383 SCG3Q8WXD2 468 aaKnown RBP5.31□□□□□ -1.56
VCL-203ENST00000461383 ANO2Q9NQ90 1003 aa5.31□□□□□ -1.56
VCL-203ENST00000461383 FOXO3O43524 673 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 LILRA1O75019 489 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 STAU1O95793 577 aaKnown RBP5.3□□□□□ -1.56
VCL-203ENST00000461383 GNRH1P01148 92 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 INHAP05111 366 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 ADH1AP07327 375 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 SLURP2P0DP57 97 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 IGFBP4P22692 258 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 ITGA6P23229 1130 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 WEE1P30291 646 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 CTSOP43234 321 aaPredicted RBP5.3□□□□□ -1.56
VCL-203ENST00000461383 MARSP56192 900 aaKnown RBP5.3□□□□□ -1.56
VCL-203ENST00000461383 GTF3C2Q8WUA4 911 aaPredicted RBP5.3□□□□□ -1.56
VCL-203ENST00000461383 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.3□□□□□ -1.56
VCL-203ENST00000461383 RAB6BQ9NRW1 208 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 EGFL7Q9UHF1 273 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 CHMP3Q9Y3E7 222 aa5.3□□□□□ -1.56
VCL-203ENST00000461383 SENP3-EIF4A1A0A087X0R7 540 aa5.29□□□□□ -1.56
VCL-203ENST00000461383 WASLO00401 505 aaPredicted RBP5.29□□□□□ -1.56
VCL-203ENST00000461383 PPP1R12BO60237 982 aaPredicted RBP5.29□□□□□ -1.56
VCL-203ENST00000461383 SCNN1DP51172 638 aa5.29□□□□□ -1.56
VCL-203ENST00000461383 FKBP5Q13451 457 aaPredicted RBP5.29□□□□□ -1.56
VCL-203ENST00000461383 NAA30Q147X3 362 aaPredicted RBP5.29□□□□□ -1.56
VCL-203ENST00000461383 KDF1Q8NAX2 398 aaPredicted RBP5.29□□□□□ -1.56
VCL-203ENST00000461383 COL25A1Q9BXS0 654 aaPredicted RBP5.29□□□□□ -1.56
VCL-203ENST00000461383 ETNK1Q9HBU6 452 aa5.29□□□□□ -1.56
VCL-203ENST00000461383 ARHGEF10LQ9HCE6 1279 aa5.29□□□□□ -1.56
VCL-203ENST00000461383 SEPT3Q9UH03 358 aa5.29□□□□□ -1.56
VCL-203ENST00000461383 AMOTL2Q9Y2J4 779 aa5.29□□□□□ -1.56
VCL-203ENST00000461383 ATAD2Q6PL18 1390 aa5.29□□□□□ -1.56
VCL-203ENST00000461383 FIGNL2A6NMB9 653 aa5.28□□□□□ -1.56
VCL-203ENST00000461383 E9PSI1 815 aa5.28□□□□□ -1.56
VCL-203ENST00000461383 RNF225M0QZC1 329 aaPredicted RBP5.28□□□□□ -1.56
VCL-203ENST00000461383 ICMTO60725 284 aa5.28□□□□□ -1.56
VCL-203ENST00000461383 ERCC3P19447 782 aa5.28□□□□□ -1.56
VCL-203ENST00000461383 FKBP4Q02790 459 aaKnown RBP eCLIP5.28□□□□□ -1.56
VCL-203ENST00000461383 ZNF385CQ66K41 422 aaPredicted RBP5.28□□□□□ -1.56
VCL-203ENST00000461383 GAS2L2Q8NHY3 880 aa5.28□□□□□ -1.56
VCL-203ENST00000461383 AGBL1Q96MI9 1066 aa5.28□□□□□ -1.56
VCL-203ENST00000461383 CNTNAP3BQ96NU0 1288 aa5.28□□□□□ -1.56
VCL-203ENST00000461383 INSM2Q96T92 566 aaPredicted RBP5.28□□□□□ -1.56
VCL-203ENST00000461383 CNTNAP3Q9BZ76 1288 aa5.28□□□□□ -1.56
VCL-203ENST00000461383 TSPAN10Q9H1Z9 355 aaPredicted RBP5.28□□□□□ -1.56
VCL-203ENST00000461383 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 A6NJY4 79 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 C21orf2O43822 256 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 ARHGEF15O94989 841 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 MAPK1P28482 360 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 PTGIRP43119 386 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 RELBQ01201 579 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 SF3B2Q13435 895 aaKnown RBP5.27□□□□□ -1.57
VCL-203ENST00000461383 TLR1Q15399 786 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 RNFT1Q5M7Z0 435 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 TBCELQ5QJ74 424 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 SLC9A9Q8IVB4 645 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 COL26A1Q96A83 441 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 ZNF428Q96B54 188 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 NLRP3Q96P20 1036 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 KRTAP4-6Q9BYQ5 205 aa5.27□□□□□ -1.57
VCL-203ENST00000461383 GTF2E1P29083 439 aaPredicted RBP5.26□□□□□ -1.57
VCL-203ENST00000461383 ADD1P35611 737 aaKnown RBP5.26□□□□□ -1.57
VCL-203ENST00000461383 SMTNP53814 917 aa5.26□□□□□ -1.57
VCL-203ENST00000461383 MTMR3Q13615 1198 aa5.26□□□□□ -1.57
VCL-203ENST00000461383 AAMPQ13685 434 aa5.26□□□□□ -1.57
VCL-203ENST00000461383 SV2AQ7L0J3 742 aa5.26□□□□□ -1.57
VCL-203ENST00000461383 NBPF15Q8N660 670 aa5.26□□□□□ -1.57
VCL-203ENST00000461383 POLMQ9NP87 494 aaPredicted RBP5.26□□□□□ -1.57
VCL-203ENST00000461383 ADAMTS8Q9UP79 889 aa5.26□□□□□ -1.57
VCL-203ENST00000461383 DNMT3AQ9Y6K1 912 aaPredicted RBP5.26□□□□□ -1.57
VCL-203ENST00000461383 MEN1O00255 615 aa5.25□□□□□ -1.57
VCL-203ENST00000461383 GPC1P35052 558 aa5.25□□□□□ -1.57
VCL-203ENST00000461383 RNF144AP50876 292 aaPredicted RBP5.25□□□□□ -1.57
VCL-203ENST00000461383 PSMA6P60900 246 aaKnown RBP5.25□□□□□ -1.57
VCL-203ENST00000461383 CAPN12Q6ZSI9 719 aa5.25□□□□□ -1.57
VCL-203ENST00000461383 ZSCAN29Q8IWY8 852 aaPredicted RBP5.25□□□□□ -1.57
VCL-203ENST00000461383 HELQQ8TDG4 1101 aa5.25□□□□□ -1.57
VCL-203ENST00000461383 CNKSR1Q969H4 720 aa5.25□□□□□ -1.57
VCL-203ENST00000461383 GMCL1Q96IK5 515 aa5.25□□□□□ -1.57
VCL-203ENST00000461383 SLC4A9Q96Q91 983 aa5.25□□□□□ -1.57
VCL-203ENST00000461383 ESYT1Q9BSJ8 1104 aa5.25□□□□□ -1.57
VCL-203ENST00000461383 BCL2L13Q9BXK5 485 aa5.25□□□□□ -1.57
VCL-203ENST00000461383 SCHIP1Q9P0W5 487 aaPredicted RBP5.25□□□□□ -1.57
VCL-203ENST00000461383 ZNF232Q9UNY5 417 aa5.25□□□□□ -1.57
VCL-203ENST00000461383 A0A1W2PRU2 124 aa5.24□□□□□ -1.57
VCL-203ENST00000461383 ANKRD33BA6NCL7 494 aa5.24□□□□□ -1.57
VCL-203ENST00000461383 FAM13AO94988 1023 aa5.24□□□□□ -1.57
VCL-203ENST00000461383 IL2RAP01589 272 aa5.24□□□□□ -1.57
VCL-203ENST00000461383 EPHA4P54764 986 aa5.24□□□□□ -1.57
VCL-203ENST00000461383 C16orf46Q6P387 395 aa5.24□□□□□ -1.57
VCL-203ENST00000461383 VWA5B2Q8N398 1253 aa5.24□□□□□ -1.57
VCL-203ENST00000461383 XAGE2Q96GT9 111 aa5.24□□□□□ -1.57
VCL-203ENST00000461383 NGLY1Q96IV0 654 aa5.24□□□□□ -1.57
VCL-203ENST00000461383 BCL11AQ9H165 835 aa5.24□□□□□ -1.57
VCL-203ENST00000461383 ZNF395Q9H8N7 513 aaPredicted RBP5.24□□□□□ -1.57
VCL-203ENST00000461383 CABP1Q9NZU7 370 aa5.24□□□□□ -1.57
VCL-203ENST00000461383 DCTN4Q9UJW0 460 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms