RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
VARS-219ENST00000461328 COL15A1P39059 1388 aa20.36■□□□□ 0.85
VARS-219ENST00000461328 CHD4Q14839 1912 aa20.36■□□□□ 0.85
VARS-219ENST00000461328 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
VARS-219ENST00000461328 DCTN1Q14203 1278 aa20.36■□□□□ 0.85
VARS-219ENST00000461328 FKBP8Q14318 412 aa20.36■□□□□ 0.85
VARS-219ENST00000461328 WDR43Q15061 677 aaKnown RBP eCLIP20.36■□□□□ 0.85
VARS-219ENST00000461328 TEX13AQ9BXU3 409 aaPredicted RBP20.36■□□□□ 0.85
VARS-219ENST00000461328 CANXP27824 592 aaKnown RBP20.35■□□□□ 0.85
VARS-219ENST00000461328 USPL1Q5W0Q7 1092 aa20.35■□□□□ 0.85
VARS-219ENST00000461328 WWC3Q9ULE0 1092 aa20.35■□□□□ 0.85
VARS-219ENST00000461328 KCNQ3O43525 872 aa20.34■□□□□ 0.85
VARS-219ENST00000461328 C10orf71Q711Q0 1435 aa20.34■□□□□ 0.85
VARS-219ENST00000461328 PLEKHF1Q96S99 279 aa20.33■□□□□ 0.85
VARS-219ENST00000461328 NARFQ9UHQ1 456 aa20.33■□□□□ 0.85
VARS-219ENST00000461328 NFE2L2Q16236 605 aa20.32■□□□□ 0.84
VARS-219ENST00000461328 PXDNLA1KZ92 1463 aa20.31■□□□□ 0.84
VARS-219ENST00000461328 TGFB2P61812 414 aa20.31■□□□□ 0.84
VARS-219ENST00000461328 DDR1Q08345 913 aa20.31■□□□□ 0.84
VARS-219ENST00000461328 KIF13BQ9NQT8 1826 aa20.31■□□□□ 0.84
VARS-219ENST00000461328 A0A087WZG4 1122 aa20.3■□□□□ 0.84
VARS-219ENST00000461328 EIF5P55010 431 aaKnown RBP20.3■□□□□ 0.84
VARS-219ENST00000461328 ZNF784Q8NCA9 323 aaPredicted RBP20.3■□□□□ 0.84
VARS-219ENST00000461328 ZNF330Q9Y3S2 320 aaPredicted RBP20.3■□□□□ 0.84
VARS-219ENST00000461328 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
VARS-219ENST00000461328 NPM2Q86SE8 214 aaKnown RBP20.29■□□□□ 0.84
VARS-219ENST00000461328 CCDC146Q8IYE0 955 aa20.29■□□□□ 0.84
VARS-219ENST00000461328 GOLGB1Q14789 3259 aaKnown RBP20.29■□□□□ 0.84
VARS-219ENST00000461328 UTRNP46939 3433 aa20.28■□□□□ 0.84
VARS-219ENST00000461328 A0A0G2JLW4 131 aa20.28■□□□□ 0.84
VARS-219ENST00000461328 POLRMTO00411 1230 aaKnown RBP20.28■□□□□ 0.84
VARS-219ENST00000461328 TM4SF1P30408 202 aa20.28■□□□□ 0.84
VARS-219ENST00000461328 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
VARS-219ENST00000461328 A1BGP04217 495 aa20.27■□□□□ 0.84
VARS-219ENST00000461328 SNRPA1P09661 255 aaKnown RBP20.27■□□□□ 0.84
VARS-219ENST00000461328 IL6STP40189 918 aaPredicted RBP20.27■□□□□ 0.84
VARS-219ENST00000461328 NFIXQ14938 502 aa20.27■□□□□ 0.84
VARS-219ENST00000461328 KIAA1551Q9HCM1 1747 aa20.27■□□□□ 0.83
VARS-219ENST00000461328 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
VARS-219ENST00000461328 DPEP1P16444 411 aa20.26■□□□□ 0.83
VARS-219ENST00000461328 BCL2L12Q9HB09 334 aa20.26■□□□□ 0.83
VARS-219ENST00000461328 PRAMEF22A3QJZ6 481 aa20.25■□□□□ 0.83
VARS-219ENST00000461328 ANP32CO43423 234 aa20.25■□□□□ 0.83
VARS-219ENST00000461328 RIPK4P57078 832 aa20.25■□□□□ 0.83
VARS-219ENST00000461328 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
VARS-219ENST00000461328 THUMPD2Q9BTF0 503 aaKnown RBP20.25■□□□□ 0.83
VARS-219ENST00000461328 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
VARS-219ENST00000461328 TBC1D2BQ9UPU7 963 aa20.25■□□□□ 0.83
VARS-219ENST00000461328 BCS1LQ9Y276 419 aa20.25■□□□□ 0.83
VARS-219ENST00000461328 USP16Q9Y5T5 823 aa20.25■□□□□ 0.83
VARS-219ENST00000461328 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
VARS-219ENST00000461328 NEUROD2Q15784 382 aa20.23■□□□□ 0.83
VARS-219ENST00000461328 BICDL1Q6ZP65 573 aa20.23■□□□□ 0.83
VARS-219ENST00000461328 RUNDC1Q96C34 613 aa20.23■□□□□ 0.83
VARS-219ENST00000461328 ADAMTS8Q9UP79 889 aa20.23■□□□□ 0.83
VARS-219ENST00000461328 RRP7AQ9Y3A4 280 aaKnown RBP20.23■□□□□ 0.83
VARS-219ENST00000461328 SERPINB2P05120 415 aa20.22■□□□□ 0.83
VARS-219ENST00000461328 TMPOP42166 694 aaKnown RBP20.22■□□□□ 0.83
VARS-219ENST00000461328 PIP4K2AP48426 406 aaPredicted RBP20.22■□□□□ 0.83
VARS-219ENST00000461328 SCN7AQ01118 1682 aa20.22■□□□□ 0.83
VARS-219ENST00000461328 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
VARS-219ENST00000461328 KCNA3P22001 575 aa20.2■□□□□ 0.82
VARS-219ENST00000461328 CHRNA5P30532 468 aa20.2■□□□□ 0.82
VARS-219ENST00000461328 TBC1D9BQ66K14 1250 aa20.2■□□□□ 0.82
VARS-219ENST00000461328 PIM2Q9P1W9 311 aa20.2■□□□□ 0.82
VARS-219ENST00000461328 KDM3BQ7LBC6 1761 aa20.19■□□□□ 0.82
VARS-219ENST00000461328 CAMTA2O94983 1202 aa20.19■□□□□ 0.82
VARS-219ENST00000461328 AFDNP55196 1824 aaKnown RBP20.18■□□□□ 0.82
VARS-219ENST00000461328 NRXN2Q9P2S2 1712 aa20.18■□□□□ 0.82
VARS-219ENST00000461328 LAMB4A4D0S4 1761 aa20.17■□□□□ 0.82
VARS-219ENST00000461328 EIF4A1P60842 406 aaKnown RBP20.17■□□□□ 0.82
VARS-219ENST00000461328 DALRD3Q5D0E6 543 aaKnown RBP20.17■□□□□ 0.82
VARS-219ENST00000461328 ARHGAP27Q6ZUM4 889 aa20.17■□□□□ 0.82
VARS-219ENST00000461328 TSPYL4Q9UJ04 414 aa20.17■□□□□ 0.82
VARS-219ENST00000461328 BRCA1P38398 1863 aaKnown RBP20.17■□□□□ 0.82
VARS-219ENST00000461328 CARMIL3Q8ND23 1372 aa20.17■□□□□ 0.82
VARS-219ENST00000461328 NBPF26B4DH59 902 aa20.16■□□□□ 0.82
VARS-219ENST00000461328 GIGYF1O75420 1035 aaPredicted RBP20.16■□□□□ 0.82
VARS-219ENST00000461328 NBPF10Q6P3W6 841 aaKnown RBP20.16■□□□□ 0.82
VARS-219ENST00000461328 NBPF15Q8N660 670 aa20.16■□□□□ 0.82
VARS-219ENST00000461328 SETDB2Q96T68 719 aa20.16■□□□□ 0.82
VARS-219ENST00000461328 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
VARS-219ENST00000461328 NPHP1O15259 732 aa20.15■□□□□ 0.82
VARS-219ENST00000461328 MRS2Q9HD23 443 aa20.15■□□□□ 0.82
VARS-219ENST00000461328 ZNF652Q9Y2D9 606 aa20.15■□□□□ 0.82
VARS-219ENST00000461328 ATP10DQ9P241 1426 aa20.15■□□□□ 0.82
VARS-219ENST00000461328 CCDC184Q52MB2 194 aa20.14■□□□□ 0.81
VARS-219ENST00000461328 ADCY9O60503 1353 aa20.13■□□□□ 0.81
VARS-219ENST00000461328 C2CD5Q86YS7 1000 aa20.13■□□□□ 0.81
VARS-219ENST00000461328 H0YIN7 160 aa20.12■□□□□ 0.81
VARS-219ENST00000461328 PRR5LQ6MZQ0 368 aa20.12■□□□□ 0.81
VARS-219ENST00000461328 CLEC4GQ6UXB4 293 aa20.12■□□□□ 0.81
VARS-219ENST00000461328 CNBD1Q8NA66 436 aa20.12■□□□□ 0.81
VARS-219ENST00000461328 LAS1LQ9Y4W2 734 aaKnown RBP20.12■□□□□ 0.81
VARS-219ENST00000461328 ARFGEF1Q9Y6D6 1849 aa20.11■□□□□ 0.81
VARS-219ENST00000461328 APAF1O14727 1248 aa20.11■□□□□ 0.81
VARS-219ENST00000461328 CCDC24Q8N4L8 307 aa20.11■□□□□ 0.81
VARS-219ENST00000461328 NGEFQ8N5V2 710 aa20.11■□□□□ 0.81
VARS-219ENST00000461328 BABAM1Q9NWV8 329 aa20.11■□□□□ 0.81
VARS-219ENST00000461328 PDE6BP35913 854 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms