RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 NUDCQ9Y266 331 aa12.94□□□□□ -0.34
CD40-203ENST00000461171 COL15A1P39059 1388 aa12.94□□□□□ -0.34
CD40-203ENST00000461171 HEG1Q9ULI3 1381 aa12.94□□□□□ -0.34
CD40-203ENST00000461171 FCHSD2O94868 740 aa12.93□□□□□ -0.34
CD40-203ENST00000461171 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
CD40-203ENST00000461171 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.34
CD40-203ENST00000461171 TEFQ10587 303 aa12.93□□□□□ -0.34
CD40-203ENST00000461171 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
CD40-203ENST00000461171 N4BP2Q86UW6 1770 aaPredicted RBP12.93□□□□□ -0.34
CD40-203ENST00000461171 TGFB2P61812 414 aa12.92□□□□□ -0.34
CD40-203ENST00000461171 TTC5Q8N0Z6 440 aa12.92□□□□□ -0.34
CD40-203ENST00000461171 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
CD40-203ENST00000461171 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
CD40-203ENST00000461171 ATP10DQ9P241 1426 aa12.91□□□□□ -0.34
CD40-203ENST00000461171 POLRMTO00411 1230 aaKnown RBP12.91□□□□□ -0.34
CD40-203ENST00000461171 TM4SF1P30408 202 aa12.91□□□□□ -0.34
CD40-203ENST00000461171 BCL2L12Q9HB09 334 aa12.91□□□□□ -0.34
CD40-203ENST00000461171 NARFQ9UHQ1 456 aa12.91□□□□□ -0.34
CD40-203ENST00000461171 WWC3Q9ULE0 1092 aa12.91□□□□□ -0.34
CD40-203ENST00000461171 SCN7AQ01118 1682 aa12.91□□□□□ -0.34
CD40-203ENST00000461171 EIF5P55010 431 aaKnown RBP12.9□□□□□ -0.34
CD40-203ENST00000461171 USPL1Q5W0Q7 1092 aa12.9□□□□□ -0.34
CD40-203ENST00000461171 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
CD40-203ENST00000461171 ZPR1O75312 459 aa12.89□□□□□ -0.35
CD40-203ENST00000461171 STARD3NLO95772 234 aa12.89□□□□□ -0.35
CD40-203ENST00000461171 DPEP1P16444 411 aa12.89□□□□□ -0.35
CD40-203ENST00000461171 KCNA3P22001 575 aa12.89□□□□□ -0.35
CD40-203ENST00000461171 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
CD40-203ENST00000461171 AFDNP55196 1824 aaKnown RBP12.89□□□□□ -0.35
CD40-203ENST00000461171 ARFGEF1Q9Y6D6 1849 aa12.88□□□□□ -0.35
CD40-203ENST00000461171 KCNQ3O43525 872 aa12.88□□□□□ -0.35
CD40-203ENST00000461171 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
CD40-203ENST00000461171 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
CD40-203ENST00000461171 NFIXQ14938 502 aa12.88□□□□□ -0.35
CD40-203ENST00000461171 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
CD40-203ENST00000461171 BTBD11A6QL63 1104 aa12.87□□□□□ -0.35
CD40-203ENST00000461171 MCM10Q7L590 875 aa12.87□□□□□ -0.35
CD40-203ENST00000461171 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
CD40-203ENST00000461171 IL6STP40189 918 aaPredicted RBP12.86□□□□□ -0.35
CD40-203ENST00000461171 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
CD40-203ENST00000461171 BCS1LQ9Y276 419 aa12.86□□□□□ -0.35
CD40-203ENST00000461171 BCORQ6W2J9 1755 aa12.86□□□□□ -0.35
CD40-203ENST00000461171 CARMIL3Q8ND23 1372 aa12.85□□□□□ -0.35
CD40-203ENST00000461171 KDM3BQ7LBC6 1761 aa12.85□□□□□ -0.35
CD40-203ENST00000461171 DLEC1Q9Y238 1755 aa12.85□□□□□ -0.35
CD40-203ENST00000461171 A0A087WZG4 1122 aa12.85□□□□□ -0.35
CD40-203ENST00000461171 C1QTNF8P60827 252 aa12.85□□□□□ -0.35
CD40-203ENST00000461171 DCTN1Q14203 1278 aa12.85□□□□□ -0.35
CD40-203ENST00000461171 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
CD40-203ENST00000461171 GIGYF1O75420 1035 aaPredicted RBP12.84□□□□□ -0.35
CD40-203ENST00000461171 A1BGP04217 495 aa12.84□□□□□ -0.35
CD40-203ENST00000461171 CHRNA5P30532 468 aa12.84□□□□□ -0.35
CD40-203ENST00000461171 RALBP1Q15311 655 aa12.84□□□□□ -0.35
CD40-203ENST00000461171 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
CD40-203ENST00000461171 PRAMEF22A3QJZ6 481 aa12.83□□□□□ -0.36
CD40-203ENST00000461171 SERPINB2P05120 415 aa12.83□□□□□ -0.36
CD40-203ENST00000461171 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
CD40-203ENST00000461171 PIM2Q9P1W9 311 aa12.83□□□□□ -0.36
CD40-203ENST00000461171 USP16Q9Y5T5 823 aa12.83□□□□□ -0.36
CD40-203ENST00000461171 ANKRD31Q8N7Z5 1873 aa12.82□□□□□ -0.36
CD40-203ENST00000461171 CAMTA2O94983 1202 aa12.82□□□□□ -0.36
CD40-203ENST00000461171 TAF7Q15545 349 aaPredicted RBP12.82□□□□□ -0.36
CD40-203ENST00000461171 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
CD40-203ENST00000461171 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
CD40-203ENST00000461171 TBC1D2BQ9UPU7 963 aa12.82□□□□□ -0.36
CD40-203ENST00000461171 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
CD40-203ENST00000461171 GPBP1L1Q9HC44 474 aaPredicted RBP12.81□□□□□ -0.36
CD40-203ENST00000461171 COL11A2P13942 1736 aaPredicted RBP12.8□□□□□ -0.36
CD40-203ENST00000461171 NBPF26B4DH59 902 aa12.8□□□□□ -0.36
CD40-203ENST00000461171 NEFMP07197 916 aa12.8□□□□□ -0.36
CD40-203ENST00000461171 PIP4K2AP48426 406 aaPredicted RBP12.8□□□□□ -0.36
CD40-203ENST00000461171 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
CD40-203ENST00000461171 NBPF10Q6P3W6 841 aaKnown RBP12.8□□□□□ -0.36
CD40-203ENST00000461171 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
CD40-203ENST00000461171 ARHGAP27Q6ZUM4 889 aa12.8□□□□□ -0.36
CD40-203ENST00000461171 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
CD40-203ENST00000461171 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
CD40-203ENST00000461171 RGL2O15211 777 aa12.79□□□□□ -0.36
CD40-203ENST00000461171 PRR5LQ6MZQ0 368 aa12.79□□□□□ -0.36
CD40-203ENST00000461171 DZIP3Q86Y13 1208 aaKnown RBP12.79□□□□□ -0.36
CD40-203ENST00000461171 THUMPD2Q9BTF0 503 aaKnown RBP12.79□□□□□ -0.36
CD40-203ENST00000461171 MIS18AQ9NYP9 233 aa12.79□□□□□ -0.36
CD40-203ENST00000461171 MYBBP1AQ9BQG0 1328 aaKnown RBP12.79□□□□□ -0.36
CD40-203ENST00000461171 MAPK8IP3Q9UPT6 1336 aa12.79□□□□□ -0.36
CD40-203ENST00000461171 PNISRQ8TF01 805 aaKnown RBP12.78□□□□□ -0.36
CD40-203ENST00000461171 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
CD40-203ENST00000461171 SBF1O95248 1867 aa12.77□□□□□ -0.37
CD40-203ENST00000461171 KIF3CO14782 793 aa12.77□□□□□ -0.37
CD40-203ENST00000461171 EIF4A1P60842 406 aaKnown RBP12.77□□□□□ -0.37
CD40-203ENST00000461171 CLEC4GQ6UXB4 293 aa12.77□□□□□ -0.37
CD40-203ENST00000461171 ZNF526Q8TF50 670 aaPredicted RBP12.77□□□□□ -0.37
CD40-203ENST00000461171 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.37
CD40-203ENST00000461171 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
CD40-203ENST00000461171 C9orf131Q5VYM1 1079 aa12.76□□□□□ -0.37
CD40-203ENST00000461171 NPM2Q86SE8 214 aaKnown RBP12.76□□□□□ -0.37
CD40-203ENST00000461171 C2CD5Q86YS7 1000 aa12.76□□□□□ -0.37
CD40-203ENST00000461171 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
CD40-203ENST00000461171 CNBD1Q8NA66 436 aa12.76□□□□□ -0.37
CD40-203ENST00000461171 SETDB2Q96T68 719 aa12.76□□□□□ -0.37
CD40-203ENST00000461171 CEP350Q5VT06 3117 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms