RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 NOD1Q9Y239 953 aa7.59□□□□□ -1.19
SPTLC1-203ENST00000461132 ARAFP10398 606 aa7.58□□□□□ -1.2
SPTLC1-203ENST00000461132 SKIP12755 728 aa7.58□□□□□ -1.2
SPTLC1-203ENST00000461132 CTBSQ01459 385 aa7.58□□□□□ -1.2
SPTLC1-203ENST00000461132 UBAP2LQ14157 1087 aaKnown RBP7.58□□□□□ -1.2
SPTLC1-203ENST00000461132 GRIN2CQ14957 1233 aa7.58□□□□□ -1.2
SPTLC1-203ENST00000461132 A0A1W2PNR3 127 aa7.57□□□□□ -1.2
SPTLC1-203ENST00000461132 DCDC2BA2VCK2 349 aa7.57□□□□□ -1.2
SPTLC1-203ENST00000461132 A6NJY4 79 aa7.57□□□□□ -1.2
SPTLC1-203ENST00000461132 NEURL1BA8MQ27 555 aa7.57□□□□□ -1.2
SPTLC1-203ENST00000461132 KHNYNO15037 678 aaKnown RBP7.57□□□□□ -1.2
SPTLC1-203ENST00000461132 RAD21O60216 631 aa7.57□□□□□ -1.2
SPTLC1-203ENST00000461132 MCM6Q14566 821 aa7.57□□□□□ -1.2
SPTLC1-203ENST00000461132 NEUROD4Q9HD90 331 aa7.57□□□□□ -1.2
SPTLC1-203ENST00000461132 NOP53Q9NZM5 478 aaKnown RBP7.57□□□□□ -1.2
SPTLC1-203ENST00000461132 PRR12Q9ULL5 1215 aa7.57□□□□□ -1.2
SPTLC1-203ENST00000461132 CDK2AP1O14519 115 aa7.56□□□□□ -1.2
SPTLC1-203ENST00000461132 C2CD2LO14523 706 aa7.56□□□□□ -1.2
SPTLC1-203ENST00000461132 GNB5O14775 395 aa7.56□□□□□ -1.2
SPTLC1-203ENST00000461132 LZTS3O60299 673 aaPredicted RBP7.56□□□□□ -1.2
SPTLC1-203ENST00000461132 ATP4AP20648 1035 aa7.56□□□□□ -1.2
SPTLC1-203ENST00000461132 C1orf229Q6ZS94 237 aaPredicted RBP7.56□□□□□ -1.2
SPTLC1-203ENST00000461132 NDFIP2Q9NV92 336 aa7.56□□□□□ -1.2
SPTLC1-203ENST00000461132 ZDHHC3Q9NYG2 299 aa7.56□□□□□ -1.2
SPTLC1-203ENST00000461132 EPXP11678 715 aa7.55□□□□□ -1.2
SPTLC1-203ENST00000461132 ADH6P28332 368 aa7.55□□□□□ -1.2
SPTLC1-203ENST00000461132 TMEM229AB2RXF0 380 aa7.54□□□□□ -1.2
SPTLC1-203ENST00000461132 MAPTP10636 758 aaKnown RBP7.54□□□□□ -1.2
SPTLC1-203ENST00000461132 CD33P20138 364 aa7.54□□□□□ -1.2
SPTLC1-203ENST00000461132 GTF2IP78347 998 aa7.54□□□□□ -1.2
SPTLC1-203ENST00000461132 MTFR1Q15390 333 aa7.54□□□□□ -1.2
SPTLC1-203ENST00000461132 BTBD6Q96KE9 485 aa7.54□□□□□ -1.2
SPTLC1-203ENST00000461132 SLC4A9Q96Q91 983 aa7.54□□□□□ -1.2
SPTLC1-203ENST00000461132 CHMP3Q9Y3E7 222 aa7.54□□□□□ -1.2
SPTLC1-203ENST00000461132 AVENQ9NQS1 362 aaPredicted RBP7.53□□□□□ -1.2
SPTLC1-203ENST00000461132 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
SPTLC1-203ENST00000461132 PIK3CDO00329 1044 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 ADAM23O75077 832 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 PROCP04070 461 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 ALAS2P22557 587 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 TNP2Q05952 138 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 FAM182BQ5T319 152 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 CHSY3Q70JA7 882 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 TRIM50Q86XT4 487 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 NFATC2IPQ8NCF5 419 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 MARK1Q9P0L2 795 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 ZNF232Q9UNY5 417 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 COG6Q9Y2V7 657 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 PARP3Q9Y6F1 533 aa7.52□□□□□ -1.21
SPTLC1-203ENST00000461132 KRBA1A5PL33 1030 aa7.51□□□□□ -1.21
SPTLC1-203ENST00000461132 K7ELQ4 463 aaPredicted RBP7.51□□□□□ -1.21
SPTLC1-203ENST00000461132 FAM157BP0CG42 384 aa7.51□□□□□ -1.21
SPTLC1-203ENST00000461132 NCOA4Q13772 614 aa7.51□□□□□ -1.21
SPTLC1-203ENST00000461132 ZIC5Q96T25 663 aa7.51□□□□□ -1.21
SPTLC1-203ENST00000461132 PCDHGA11Q9Y5H2 935 aa7.51□□□□□ -1.21
SPTLC1-203ENST00000461132 ATP1A2P50993 1020 aa7.5□□□□□ -1.21
SPTLC1-203ENST00000461132 LAMC2Q13753 1193 aa7.5□□□□□ -1.21
SPTLC1-203ENST00000461132 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.5□□□□□ -1.21
SPTLC1-203ENST00000461132 IQSEC3Q9UPP2 1182 aaPredicted RBP7.5□□□□□ -1.21
SPTLC1-203ENST00000461132 RBM19Q9Y4C8 960 aaKnown RBP7.5□□□□□ -1.21
SPTLC1-203ENST00000461132 USP17L5A8MUK1 530 aa7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 UBTFP17480 764 aaKnown RBP7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 COL8A1P27658 744 aa7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 BAG6P46379 1132 aa7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 DGKGP49619 791 aa7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 PCBP4P57723 403 aaKnown RBP7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 NEUROD1Q13562 356 aa7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 LINC00114Q6XXX2 140 aa7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 DEPDC4Q8N2C3 294 aa7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 L3MBTL2Q969R5 705 aa7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 SUV39H2Q9H5I1 410 aa7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 ZNF358Q9NW07 568 aa7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 SCHIP1Q9P0W5 487 aaPredicted RBP7.49□□□□□ -1.21
SPTLC1-203ENST00000461132 SPDYE3A6NKU9 549 aa7.48□□□□□ -1.21
SPTLC1-203ENST00000461132 ITGB2P05107 769 aa7.48□□□□□ -1.21
SPTLC1-203ENST00000461132 NOS2P35228 1153 aa7.48□□□□□ -1.21
SPTLC1-203ENST00000461132 SAMD5Q5TGI4 173 aa7.48□□□□□ -1.21
SPTLC1-203ENST00000461132 ZNF468Q5VIY5 522 aaPredicted RBP7.48□□□□□ -1.21
SPTLC1-203ENST00000461132 ALG2Q9H553 416 aa7.48□□□□□ -1.21
SPTLC1-203ENST00000461132 USP3Q9Y6I4 520 aa7.48□□□□□ -1.21
SPTLC1-203ENST00000461132 SERTM1A2A2V5 107 aa7.47□□□□□ -1.21
SPTLC1-203ENST00000461132 TXLNAP40222 546 aa7.47□□□□□ -1.21
SPTLC1-203ENST00000461132 FLIIQ13045 1269 aa7.47□□□□□ -1.21
SPTLC1-203ENST00000461132 TEAD4Q15561 434 aa7.47□□□□□ -1.21
SPTLC1-203ENST00000461132 LRRC69Q6ZNQ3 347 aa7.47□□□□□ -1.21
SPTLC1-203ENST00000461132 SLC9A9Q8IVB4 645 aa7.47□□□□□ -1.21
SPTLC1-203ENST00000461132 RHPN1Q8TCX5 695 aa7.47□□□□□ -1.21
SPTLC1-203ENST00000461132 GPC6Q9Y625 555 aaPredicted RBP7.47□□□□□ -1.21
SPTLC1-203ENST00000461132 FCHSD1Q86WN1 690 aa7.46□□□□□ -1.22
SPTLC1-203ENST00000461132 ELOA3CA0A087WX78 387 aaPredicted RBP7.45□□□□□ -1.22
SPTLC1-203ENST00000461132 ELOA3DA6NLF2 546 aaPredicted RBP7.45□□□□□ -1.22
SPTLC1-203ENST00000461132 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
SPTLC1-203ENST00000461132 FURINP09958 794 aa7.45□□□□□ -1.22
SPTLC1-203ENST00000461132 ELOA3BQ3SY89 546 aa7.45□□□□□ -1.22
SPTLC1-203ENST00000461132 TBCELQ5QJ74 424 aa7.45□□□□□ -1.22
SPTLC1-203ENST00000461132 SYT9Q86SS6 491 aa7.45□□□□□ -1.22
SPTLC1-203ENST00000461132 TNS4Q8IZW8 715 aa7.45□□□□□ -1.22
SPTLC1-203ENST00000461132 ELOA3Q8NG57 546 aa7.45□□□□□ -1.22
SPTLC1-203ENST00000461132 TPCN2Q8NHX9 752 aa7.45□□□□□ -1.22
SPTLC1-203ENST00000461132 ANKIB1Q9P2G1 1089 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms