RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 UBR2Q8IWV8 1755 aa17.99■□□□□ 0.47
CHRD-209ENST00000461120 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
CHRD-209ENST00000461120 PTCD1O75127 700 aaKnown RBP17.98■□□□□ 0.47
CHRD-209ENST00000461120 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
CHRD-209ENST00000461120 HNRNPUQ00839 825 aaKnown RBP eCLIP17.98■□□□□ 0.47
CHRD-209ENST00000461120 CFAP44Q96MT7 982 aa17.98■□□□□ 0.47
CHRD-209ENST00000461120 RBM42Q9BTD8 480 aaKnown RBP17.98■□□□□ 0.47
CHRD-209ENST00000461120 IFT57Q9NWB7 429 aa17.98■□□□□ 0.47
CHRD-209ENST00000461120 TSPYL4Q9UJ04 414 aa17.98■□□□□ 0.47
CHRD-209ENST00000461120 LAS1LQ9Y4W2 734 aaKnown RBP17.98■□□□□ 0.47
CHRD-209ENST00000461120 IL16Q14005 1332 aa17.98■□□□□ 0.47
CHRD-209ENST00000461120 LOC102724428A0A0B4J2F2 783 aa17.97■□□□□ 0.47
CHRD-209ENST00000461120 SIK1P57059 783 aa17.97■□□□□ 0.47
CHRD-209ENST00000461120 GNAI1P63096 354 aa17.97■□□□□ 0.47
CHRD-209ENST00000461120 SLC4A9Q96Q91 983 aa17.97■□□□□ 0.47
CHRD-209ENST00000461120 SLC27A3Q5K4L6 730 aa17.96■□□□□ 0.47
CHRD-209ENST00000461120 ZNF496Q96IT1 587 aaPredicted RBP17.96■□□□□ 0.47
CHRD-209ENST00000461120 CCNL1Q9UK58 526 aaPredicted RBP17.96■□□□□ 0.47
CHRD-209ENST00000461120 KCNQ4P56696 695 aa17.95■□□□□ 0.46
CHRD-209ENST00000461120 FMNL2Q96PY5 1086 aa17.95■□□□□ 0.46
CHRD-209ENST00000461120 LRRC4BQ9NT99 713 aa17.95■□□□□ 0.46
CHRD-209ENST00000461120 HEG1Q9ULI3 1381 aa17.94■□□□□ 0.46
CHRD-209ENST00000461120 ZNF831Q5JPB2 1677 aa17.94■□□□□ 0.46
CHRD-209ENST00000461120 ATP6V1AP38606 617 aa17.94■□□□□ 0.46
CHRD-209ENST00000461120 EIF4A1P60842 406 aaKnown RBP17.94■□□□□ 0.46
CHRD-209ENST00000461120 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
CHRD-209ENST00000461120 ITPK1Q13572 414 aa17.93■□□□□ 0.46
CHRD-209ENST00000461120 C16orf71Q8IYS4 520 aaPredicted RBP17.93■□□□□ 0.46
CHRD-209ENST00000461120 VSIG10Q8N0Z9 540 aa17.93■□□□□ 0.46
CHRD-209ENST00000461120 CICQ96RK0 1608 aaPredicted RBP17.93■□□□□ 0.46
CHRD-209ENST00000461120 GOLGA2Q08379 1002 aa17.92■□□□□ 0.46
CHRD-209ENST00000461120 ZNF827Q17R98 1081 aa17.92■□□□□ 0.46
CHRD-209ENST00000461120 SPINK5Q9NQ38 1064 aaPredicted RBP17.92■□□□□ 0.46
CHRD-209ENST00000461120 TJP1Q07157 1748 aa17.92■□□□□ 0.46
CHRD-209ENST00000461120 DNAJC10Q8IXB1 793 aa17.91■□□□□ 0.46
CHRD-209ENST00000461120 TSR2Q969E8 191 aaKnown RBP17.91■□□□□ 0.46
CHRD-209ENST00000461120 TAF1LQ8IZX4 1826 aa17.91■□□□□ 0.46
CHRD-209ENST00000461120 C5P01031 1676 aa17.9■□□□□ 0.46
CHRD-209ENST00000461120 LINC00116Q8NCU8 138 aa17.9■□□□□ 0.46
CHRD-209ENST00000461120 RBM46Q8TBY0 533 aaKnown RBP17.9■□□□□ 0.46
CHRD-209ENST00000461120 TFCP2L1Q9NZI6 479 aa17.9■□□□□ 0.46
CHRD-209ENST00000461120 ZBED9Q6R2W3 1325 aa17.9■□□□□ 0.46
CHRD-209ENST00000461120 FANCIQ9NVI1 1328 aa17.9■□□□□ 0.46
CHRD-209ENST00000461120 SNRPA1P09661 255 aaKnown RBP17.89■□□□□ 0.45
CHRD-209ENST00000461120 MYH16Q9H6N6 1097 aa17.89■□□□□ 0.45
CHRD-209ENST00000461120 CD2APQ9Y5K6 639 aa17.89■□□□□ 0.45
CHRD-209ENST00000461120 COL5A3P25940 1745 aaPredicted RBP17.89■□□□□ 0.45
CHRD-209ENST00000461120 PRAMEF22A3QJZ6 481 aa17.88■□□□□ 0.45
CHRD-209ENST00000461120 E9PSI1 815 aa17.88■□□□□ 0.45
CHRD-209ENST00000461120 HSPA1AP0DMV8 641 aaKnown RBP17.88■□□□□ 0.45
CHRD-209ENST00000461120 HSPA1BP0DMV9 641 aaKnown RBP17.88■□□□□ 0.45
CHRD-209ENST00000461120 HMGB2P26583 209 aaKnown RBP17.88■□□□□ 0.45
CHRD-209ENST00000461120 SLFN5Q08AF3 891 aa17.88■□□□□ 0.45
CHRD-209ENST00000461120 KRT24Q2M2I5 525 aa17.88■□□□□ 0.45
CHRD-209ENST00000461120 CDCA7LQ96GN5 454 aa17.88■□□□□ 0.45
CHRD-209ENST00000461120 TEX13AQ9BXU3 409 aaPredicted RBP17.88■□□□□ 0.45
CHRD-209ENST00000461120 HTRA3P83110 453 aa17.87■□□□□ 0.45
CHRD-209ENST00000461120 FSTL1Q12841 308 aa17.87■□□□□ 0.45
CHRD-209ENST00000461120 C4BP0C0L5 1744 aa17.86■□□□□ 0.45
CHRD-209ENST00000461120 CYP19A1P11511 503 aaPredicted RBP17.86■□□□□ 0.45
CHRD-209ENST00000461120 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
CHRD-209ENST00000461120 USP16Q9Y5T5 823 aa17.86■□□□□ 0.45
CHRD-209ENST00000461120 PNPLA7Q6ZV29 1317 aa17.86■□□□□ 0.45
CHRD-209ENST00000461120 TUBGCP6Q96RT7 1819 aa17.86■□□□□ 0.45
CHRD-209ENST00000461120 LAMB4A4D0S4 1761 aa17.85■□□□□ 0.45
CHRD-209ENST00000461120 STARD3NLO95772 234 aa17.85■□□□□ 0.45
CHRD-209ENST00000461120 RC3H1Q5TC82 1133 aaKnown RBP17.85■□□□□ 0.45
CHRD-209ENST00000461120 DUSP27Q5VZP5 1158 aa17.85■□□□□ 0.45
CHRD-209ENST00000461120 C8orf58Q8NAV2 365 aa17.85■□□□□ 0.45
CHRD-209ENST00000461120 CNTNAP4Q9C0A0 1308 aa17.85■□□□□ 0.45
CHRD-209ENST00000461120 MSH5O43196 834 aa17.84■□□□□ 0.45
CHRD-209ENST00000461120 HOXB7P09629 217 aa17.84■□□□□ 0.45
CHRD-209ENST00000461120 CRKLP46109 303 aaKnown RBP17.84■□□□□ 0.45
CHRD-209ENST00000461120 TRMT2AQ8IZ69 625 aaKnown RBP17.84■□□□□ 0.45
CHRD-209ENST00000461120 MYH14Q7Z406 1995 aaKnown RBP17.83■□□□□ 0.44
CHRD-209ENST00000461120 EXOSC9Q06265 439 aaKnown RBP17.83■□□□□ 0.44
CHRD-209ENST00000461120 INTS5Q6P9B9 1019 aaKnown RBP17.83■□□□□ 0.44
CHRD-209ENST00000461120 TSPYL6Q8N831 410 aa17.83■□□□□ 0.44
CHRD-209ENST00000461120 AK7Q96M32 723 aa17.83■□□□□ 0.44
CHRD-209ENST00000461120 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
CHRD-209ENST00000461120 CCDC87Q9NVE4 849 aa17.83■□□□□ 0.44
CHRD-209ENST00000461120 ELL2O00472 640 aaPredicted RBP17.82■□□□□ 0.44
CHRD-209ENST00000461120 SOS1Q07889 1333 aaPredicted RBP17.81■□□□□ 0.44
CHRD-209ENST00000461120 GNPATO15228 680 aa17.81■□□□□ 0.44
CHRD-209ENST00000461120 A1BGP04217 495 aa17.81■□□□□ 0.44
CHRD-209ENST00000461120 ZBTB1Q9Y2K1 713 aa17.81■□□□□ 0.44
CHRD-209ENST00000461120 RPS6KA4O75676 772 aa17.8■□□□□ 0.44
CHRD-209ENST00000461120 EIF2S2P20042 333 aaKnown RBP17.8■□□□□ 0.44
CHRD-209ENST00000461120 TWISTNBQ3B726 338 aaPredicted RBP17.8■□□□□ 0.44
CHRD-209ENST00000461120 FAM161AQ3B820 660 aa17.8■□□□□ 0.44
CHRD-209ENST00000461120 UBR3Q6ZT12 1888 aa17.8■□□□□ 0.44
CHRD-209ENST00000461120 HDGFL1Q5TGJ6 251 aa17.79■□□□□ 0.44
CHRD-209ENST00000461120 AMIGO3Q86WK7 504 aa17.79■□□□□ 0.44
CHRD-209ENST00000461120 ERBB4Q15303 1308 aa17.78■□□□□ 0.44
CHRD-209ENST00000461120 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
CHRD-209ENST00000461120 CANXP27824 592 aaKnown RBP17.78■□□□□ 0.44
CHRD-209ENST00000461120 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
CHRD-209ENST00000461120 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
CHRD-209ENST00000461120 NECTIN2Q92692 538 aa17.78■□□□□ 0.44
CHRD-209ENST00000461120 RTCBQ9Y3I0 505 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms