RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 EMP3P54852 163 aa9.92□□□□□ -0.82
RTN4-212ENST00000461004 MYT1Q01538 1121 aa9.92□□□□□ -0.82
RTN4-212ENST00000461004 NBPF6Q5VWK0 638 aa9.92□□□□□ -0.82
RTN4-212ENST00000461004 POTEEQ6S8J3 1075 aa9.92□□□□□ -0.82
RTN4-212ENST00000461004 NBPF4Q96M43 638 aa9.92□□□□□ -0.82
RTN4-212ENST00000461004 BCL2L12Q9HB09 334 aa9.92□□□□□ -0.82
RTN4-212ENST00000461004 ANKRD26Q9UPS8 1709 aa9.92□□□□□ -0.82
RTN4-212ENST00000461004 INSRP06213 1382 aa9.91□□□□□ -0.82
RTN4-212ENST00000461004 NPC1L1Q9UHC9 1359 aa9.91□□□□□ -0.82
RTN4-212ENST00000461004 PSDA5PKW4 1024 aaPredicted RBP9.91□□□□□ -0.82
RTN4-212ENST00000461004 GNPATO15228 680 aa9.91□□□□□ -0.82
RTN4-212ENST00000461004 MTHFSP49914 203 aa9.91□□□□□ -0.82
RTN4-212ENST00000461004 CDK12Q9NYV4 1490 aaPredicted RBP9.91□□□□□ -0.82
RTN4-212ENST00000461004 BLMP54132 1417 aaPredicted RBP9.9□□□□□ -0.82
RTN4-212ENST00000461004 RTL1A6NKG5 1358 aa9.9□□□□□ -0.82
RTN4-212ENST00000461004 FLT4P35916 1363 aa9.9□□□□□ -0.82
RTN4-212ENST00000461004 EIF4A2Q14240 407 aaKnown RBP9.9□□□□□ -0.82
RTN4-212ENST00000461004 HIC1Q14526 733 aa9.9□□□□□ -0.82
RTN4-212ENST00000461004 RGPD2P0DJD1 1756 aa9.89□□□□□ -0.83
RTN4-212ENST00000461004 ABCC6O95255 1503 aa9.89□□□□□ -0.83
RTN4-212ENST00000461004 FAM205CA6NFA0 338 aa9.89□□□□□ -0.83
RTN4-212ENST00000461004 EYA1Q99502 592 aa9.89□□□□□ -0.83
RTN4-212ENST00000461004 THRAP3Q9Y2W1 955 aaKnown RBP9.89□□□□□ -0.83
RTN4-212ENST00000461004 BRWD3Q6RI45 1802 aa9.89□□□□□ -0.83
RTN4-212ENST00000461004 SOCS7O14512 581 aa9.88□□□□□ -0.83
RTN4-212ENST00000461004 PPP2R1AP30153 589 aa9.88□□□□□ -0.83
RTN4-212ENST00000461004 KRT27Q7Z3Y8 459 aa9.88□□□□□ -0.83
RTN4-212ENST00000461004 DISP2A7MBM2 1401 aa9.88□□□□□ -0.83
RTN4-212ENST00000461004 SMG6Q86US8 1419 aaKnown RBP9.88□□□□□ -0.83
RTN4-212ENST00000461004 KIF24Q5T7B8 1368 aa9.88□□□□□ -0.83
RTN4-212ENST00000461004 THSD7AQ9UPZ6 1657 aa9.87□□□□□ -0.83
RTN4-212ENST00000461004 IL13P35225 146 aa9.87□□□□□ -0.83
RTN4-212ENST00000461004 FAM198AQ9UFP1 575 aa9.87□□□□□ -0.83
RTN4-212ENST00000461004 IL2RBP14784 551 aa9.86□□□□□ -0.83
RTN4-212ENST00000461004 PSEN2P49810 448 aa9.86□□□□□ -0.83
RTN4-212ENST00000461004 MAP2K5Q13163 448 aa9.86□□□□□ -0.83
RTN4-212ENST00000461004 AEBP1Q8IUX7 1158 aa9.86□□□□□ -0.83
RTN4-212ENST00000461004 KRI1Q8N9T8 703 aaKnown RBP9.86□□□□□ -0.83
RTN4-212ENST00000461004 MARCH10Q8NA82 808 aaPredicted RBP9.86□□□□□ -0.83
RTN4-212ENST00000461004 PARD3Q8TEW0 1356 aa9.86□□□□□ -0.83
RTN4-212ENST00000461004 EXOC5O00471 708 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 IRF6O14896 467 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 PTPREP23469 700 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 PDE3BQ13370 1112 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 DDB1Q16531 1140 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 FAM161AQ3B820 660 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 PADI6Q6TGC4 694 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 PTF1AQ7RTS3 328 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 TTC13Q8NBP0 860 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 HS3ST6Q96QI5 342 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 KCNK17Q96T54 332 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 FAM208AQ9UK61 1670 aaKnown RBP9.85□□□□□ -0.83
RTN4-212ENST00000461004 MEGF6O75095 1541 aa9.85□□□□□ -0.83
RTN4-212ENST00000461004 DDX54Q8TDD1 881 aaKnown RBP9.84□□□□□ -0.83
RTN4-212ENST00000461004 CCDC102AQ96A19 550 aa9.84□□□□□ -0.83
RTN4-212ENST00000461004 IGSF1Q8N6C5 1336 aa9.83□□□□□ -0.84
RTN4-212ENST00000461004 LRRC37A3O60309 1634 aa9.83□□□□□ -0.84
RTN4-212ENST00000461004 PPP1R3GB7ZBB8 358 aa9.83□□□□□ -0.84
RTN4-212ENST00000461004 C3orf80F5H4A9 247 aa9.83□□□□□ -0.84
RTN4-212ENST00000461004 DIAPH1O60610 1272 aaKnown RBP9.83□□□□□ -0.84
RTN4-212ENST00000461004 HMOX1P09601 288 aa9.83□□□□□ -0.84
RTN4-212ENST00000461004 SULT6B1Q6IMI4 303 aa9.83□□□□□ -0.84
RTN4-212ENST00000461004 CDCA7LQ96GN5 454 aa9.83□□□□□ -0.84
RTN4-212ENST00000461004 AK7Q96M32 723 aa9.83□□□□□ -0.84
RTN4-212ENST00000461004 CDCA7Q9BWT1 371 aaPredicted RBP9.83□□□□□ -0.84
RTN4-212ENST00000461004 COL3A1P02461 1466 aaPredicted RBP9.83□□□□□ -0.84
RTN4-212ENST00000461004 NCAPD2Q15021 1401 aa9.82□□□□□ -0.84
RTN4-212ENST00000461004 PARP4Q9UKK3 1724 aaKnown RBP9.82□□□□□ -0.84
RTN4-212ENST00000461004 TRIM66O15016 1216 aa9.82□□□□□ -0.84
RTN4-212ENST00000461004 TATP17735 454 aaPredicted RBP9.82□□□□□ -0.84
RTN4-212ENST00000461004 PRSS12P56730 875 aa9.82□□□□□ -0.84
RTN4-212ENST00000461004 DMRTA1Q5VZB9 504 aa9.82□□□□□ -0.84
RTN4-212ENST00000461004 ZNF687Q8N1G0 1237 aa9.82□□□□□ -0.84
RTN4-212ENST00000461004 ZCRB1Q8TBF4 217 aaKnown RBP9.82□□□□□ -0.84
RTN4-212ENST00000461004 RAPGEF4Q8WZA2 1011 aa9.82□□□□□ -0.84
RTN4-212ENST00000461004 PRKRIP1Q9H875 184 aaPredicted RBP9.82□□□□□ -0.84
RTN4-212ENST00000461004 WNK3Q9BYP7 1800 aa9.82□□□□□ -0.84
RTN4-212ENST00000461004 U2SURPO15042 1029 aaKnown RBP9.81□□□□□ -0.84
RTN4-212ENST00000461004 KCNQ2O43526 872 aa9.81□□□□□ -0.84
RTN4-212ENST00000461004 TRIM37O94972 964 aa9.81□□□□□ -0.84
RTN4-212ENST00000461004 RALBP1Q15311 655 aa9.81□□□□□ -0.84
RTN4-212ENST00000461004 PROX2Q3B8N5 592 aa9.81□□□□□ -0.84
RTN4-212ENST00000461004 ACSBG1Q96GR2 724 aa9.81□□□□□ -0.84
RTN4-212ENST00000461004 PHOX2BQ99453 314 aa9.81□□□□□ -0.84
RTN4-212ENST00000461004 TSKSQ9UJT2 592 aa9.81□□□□□ -0.84
RTN4-212ENST00000461004 OVOS2A0A0G2JMS6 1433 aa9.81□□□□□ -0.84
RTN4-212ENST00000461004 TNS2Q63HR2 1409 aa9.81□□□□□ -0.84
RTN4-212ENST00000461004 CYP27B1O15528 508 aa9.8□□□□□ -0.84
RTN4-212ENST00000461004 BRPF1P55201 1214 aaPredicted RBP9.8□□□□□ -0.84
RTN4-212ENST00000461004 CCDC184Q52MB2 194 aa9.8□□□□□ -0.84
RTN4-212ENST00000461004 FAM196AQ6ZSG2 479 aa9.8□□□□□ -0.84
RTN4-212ENST00000461004 DEFB132Q7Z7B7 95 aa9.8□□□□□ -0.84
RTN4-212ENST00000461004 ARHGAP33O14559 1287 aa9.79□□□□□ -0.84
RTN4-212ENST00000461004 ZBED2Q9BTP6 218 aa9.79□□□□□ -0.84
RTN4-212ENST00000461004 RBM27Q9P2N5 1060 aaKnown RBP9.79□□□□□ -0.84
RTN4-212ENST00000461004 ADGRG1Q9Y653 693 aa9.79□□□□□ -0.84
RTN4-212ENST00000461004 MYBBP1AQ9BQG0 1328 aaKnown RBP9.79□□□□□ -0.84
RTN4-212ENST00000461004 RGPD1P0DJD0 1748 aa9.79□□□□□ -0.84
RTN4-212ENST00000461004 CFAP53Q96M91 514 aa9.78□□□□□ -0.84
RTN4-212ENST00000461004 KDRP35968 1356 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms