RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 DLEC1Q9Y238 1755 aa12.65□□□□□ -0.38
COL6A2-207ENST00000460886 MYBBP1AQ9BQG0 1328 aaKnown RBP12.64□□□□□ -0.39
COL6A2-207ENST00000460886 POLRMTO00411 1230 aaKnown RBP12.64□□□□□ -0.39
COL6A2-207ENST00000460886 HMOX1P09601 288 aa12.64□□□□□ -0.39
COL6A2-207ENST00000460886 CYP19A1P11511 503 aaPredicted RBP12.64□□□□□ -0.39
COL6A2-207ENST00000460886 DNAJC10Q8IXB1 793 aa12.64□□□□□ -0.39
COL6A2-207ENST00000460886 SBF1O95248 1867 aa12.63□□□□□ -0.39
COL6A2-207ENST00000460886 MTHFSDQ2M296 383 aaKnown RBP12.63□□□□□ -0.39
COL6A2-207ENST00000460886 ZNF526Q8TF50 670 aaPredicted RBP12.63□□□□□ -0.39
COL6A2-207ENST00000460886 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
COL6A2-207ENST00000460886 COL15A1P39059 1388 aa12.62□□□□□ -0.39
COL6A2-207ENST00000460886 FCHSD2O94868 740 aa12.62□□□□□ -0.39
COL6A2-207ENST00000460886 PIM2Q9P1W9 311 aa12.62□□□□□ -0.39
COL6A2-207ENST00000460886 NARFQ9UHQ1 456 aa12.62□□□□□ -0.39
COL6A2-207ENST00000460886 ANP32CO43423 234 aa12.61□□□□□ -0.39
COL6A2-207ENST00000460886 SLC39A6Q13433 755 aa12.61□□□□□ -0.39
COL6A2-207ENST00000460886 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
COL6A2-207ENST00000460886 ZPR1O75312 459 aa12.6□□□□□ -0.39
COL6A2-207ENST00000460886 U2AF1L5P0DN76 240 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-207ENST00000460886 U2AF1Q01081 240 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL6A2-207ENST00000460886 DALRD3Q5D0E6 543 aaKnown RBP12.6□□□□□ -0.39
COL6A2-207ENST00000460886 USPL1Q5W0Q7 1092 aa12.6□□□□□ -0.39
COL6A2-207ENST00000460886 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
COL6A2-207ENST00000460886 BCL2L12Q9HB09 334 aa12.6□□□□□ -0.39
COL6A2-207ENST00000460886 ZBTB1Q9Y2K1 713 aa12.6□□□□□ -0.39
COL6A2-207ENST00000460886 TNRC6CQ9HCJ0 1690 aaKnown RBP12.59□□□□□ -0.39
COL6A2-207ENST00000460886 TOMM70O94826 608 aa12.59□□□□□ -0.39
COL6A2-207ENST00000460886 NFIXQ14938 502 aa12.59□□□□□ -0.39
COL6A2-207ENST00000460886 CEMIPQ8WUJ3 1361 aa12.58□□□□□ -0.4
COL6A2-207ENST00000460886 EIF5P55010 431 aaKnown RBP12.58□□□□□ -0.4
COL6A2-207ENST00000460886 C9orf131Q5VYM1 1079 aa12.58□□□□□ -0.4
COL6A2-207ENST00000460886 CHRNA5P30532 468 aa12.57□□□□□ -0.4
COL6A2-207ENST00000460886 IL17REQ8NFR9 667 aa12.57□□□□□ -0.4
COL6A2-207ENST00000460886 GAS2L2Q8NHY3 880 aa12.57□□□□□ -0.4
COL6A2-207ENST00000460886 RSPH6AQ9H0K4 717 aa12.57□□□□□ -0.4
COL6A2-207ENST00000460886 ZC3H4Q9UPT8 1303 aaKnown RBP12.57□□□□□ -0.4
COL6A2-207ENST00000460886 ANKRD31Q8N7Z5 1873 aa12.57□□□□□ -0.4
COL6A2-207ENST00000460886 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
COL6A2-207ENST00000460886 GNAT3A8MTJ3 354 aa12.56□□□□□ -0.4
COL6A2-207ENST00000460886 STARD3NLO95772 234 aa12.56□□□□□ -0.4
COL6A2-207ENST00000460886 PRKAR2BP31323 418 aa12.56□□□□□ -0.4
COL6A2-207ENST00000460886 ZNF790Q6PG37 636 aa12.56□□□□□ -0.4
COL6A2-207ENST00000460886 NMRK2Q9NPI5 230 aa12.56□□□□□ -0.4
COL6A2-207ENST00000460886 WDR90Q96KV7 1748 aa12.56□□□□□ -0.4
COL6A2-207ENST00000460886 BCORQ6W2J9 1755 aa12.56□□□□□ -0.4
COL6A2-207ENST00000460886 SERPINB2P05120 415 aa12.55□□□□□ -0.4
COL6A2-207ENST00000460886 APLP1P51693 650 aa12.55□□□□□ -0.4
COL6A2-207ENST00000460886 TTC5Q8N0Z6 440 aa12.55□□□□□ -0.4
COL6A2-207ENST00000460886 RBM46Q8TBY0 533 aaKnown RBP12.55□□□□□ -0.4
COL6A2-207ENST00000460886 ZNF496Q96IT1 587 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-207ENST00000460886 TEX13AQ9BXU3 409 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-207ENST00000460886 A0A087WZG4 1122 aa12.54□□□□□ -0.4
COL6A2-207ENST00000460886 TEFQ10587 303 aa12.54□□□□□ -0.4
COL6A2-207ENST00000460886 IFFO2Q5TF58 517 aa12.54□□□□□ -0.4
COL6A2-207ENST00000460886 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
COL6A2-207ENST00000460886 PHACTR3Q96KR7 559 aa12.54□□□□□ -0.4
COL6A2-207ENST00000460886 KDM2BQ8NHM5 1336 aa12.54□□□□□ -0.4
COL6A2-207ENST00000460886 CARMIL3Q8ND23 1372 aa12.54□□□□□ -0.4
COL6A2-207ENST00000460886 COL11A2P13942 1736 aaPredicted RBP12.54□□□□□ -0.4
COL6A2-207ENST00000460886 CANXP27824 592 aaKnown RBP12.53□□□□□ -0.4
COL6A2-207ENST00000460886 IL6STP40189 918 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-207ENST00000460886 WDR43Q15061 677 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL6A2-207ENST00000460886 CCDC184Q52MB2 194 aa12.53□□□□□ -0.4
COL6A2-207ENST00000460886 RNF181Q9P0P0 153 aa12.53□□□□□ -0.4
COL6A2-207ENST00000460886 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
COL6A2-207ENST00000460886 FER1L6Q2WGJ9 1857 aa12.53□□□□□ -0.4
COL6A2-207ENST00000460886 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
COL6A2-207ENST00000460886 ARFGEF2Q9Y6D5 1785 aa12.52□□□□□ -0.41
COL6A2-207ENST00000460886 NEFMP07197 916 aa12.52□□□□□ -0.41
COL6A2-207ENST00000460886 FSTL1Q12841 308 aa12.52□□□□□ -0.41
COL6A2-207ENST00000460886 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
COL6A2-207ENST00000460886 FMNL2Q96PY5 1086 aa12.52□□□□□ -0.41
COL6A2-207ENST00000460886 PDZRN3Q9UPQ7 1066 aa12.52□□□□□ -0.41
COL6A2-207ENST00000460886 DICER1Q9UPY3 1922 aaKnown RBP12.52□□□□□ -0.41
COL6A2-207ENST00000460886 PRELPP51888 382 aa12.51□□□□□ -0.41
COL6A2-207ENST00000460886 TBC1D9BQ66K14 1250 aa12.51□□□□□ -0.41
COL6A2-207ENST00000460886 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
COL6A2-207ENST00000460886 PNNQ9H307 717 aaKnown RBP12.51□□□□□ -0.41
COL6A2-207ENST00000460886 H0YIN7 160 aa12.5□□□□□ -0.41
COL6A2-207ENST00000460886 LMNB1P20700 586 aa12.5□□□□□ -0.41
COL6A2-207ENST00000460886 C2CD5Q86YS7 1000 aa12.5□□□□□ -0.41
COL6A2-207ENST00000460886 BRIP1Q9BX63 1249 aa12.5□□□□□ -0.41
COL6A2-207ENST00000460886 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
COL6A2-207ENST00000460886 ADAMTS8Q9UP79 889 aa12.5□□□□□ -0.41
COL6A2-207ENST00000460886 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
COL6A2-207ENST00000460886 NFKBIEO00221 500 aa12.49□□□□□ -0.41
COL6A2-207ENST00000460886 RGL2O15211 777 aa12.49□□□□□ -0.41
COL6A2-207ENST00000460886 CAMTA2O94983 1202 aa12.49□□□□□ -0.41
COL6A2-207ENST00000460886 RASSF7Q02833 373 aa12.49□□□□□ -0.41
COL6A2-207ENST00000460886 PRR5LQ6MZQ0 368 aa12.49□□□□□ -0.41
COL6A2-207ENST00000460886 GLTPD2A6NH11 291 aa12.48□□□□□ -0.41
COL6A2-207ENST00000460886 BTBD11A6QL63 1104 aa12.48□□□□□ -0.41
COL6A2-207ENST00000460886 A1BGP04217 495 aa12.48□□□□□ -0.41
COL6A2-207ENST00000460886 PDE6BP35913 854 aa12.48□□□□□ -0.41
COL6A2-207ENST00000460886 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
COL6A2-207ENST00000460886 CCDC146Q8IYE0 955 aa12.48□□□□□ -0.41
COL6A2-207ENST00000460886 C16orf71Q8IYS4 520 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-207ENST00000460886 TBC1D2BQ9UPU7 963 aa12.48□□□□□ -0.41
COL6A2-207ENST00000460886 LAMB4A4D0S4 1761 aa12.48□□□□□ -0.41
COL6A2-207ENST00000460886 PCNTO95613 3336 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms