RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
PCYT1A-213ENST00000460827 HSPA1AP0DMV8 641 aaKnown RBP16.1■□□□□ 0.17
PCYT1A-213ENST00000460827 HSPA1BP0DMV9 641 aaKnown RBP16.1■□□□□ 0.17
PCYT1A-213ENST00000460827 ZNF530Q6P9A1 599 aaPredicted RBP16.1■□□□□ 0.17
PCYT1A-213ENST00000460827 INTS5Q6P9B9 1019 aaKnown RBP16.1■□□□□ 0.17
PCYT1A-213ENST00000460827 DLEC1Q9Y238 1755 aa16.1■□□□□ 0.17
PCYT1A-213ENST00000460827 PLEKHO1Q53GL0 409 aaPredicted RBP16.09■□□□□ 0.17
PCYT1A-213ENST00000460827 TIAM2Q8IVF5 1701 aa16.08■□□□□ 0.17
PCYT1A-213ENST00000460827 NRXN2Q9P2S2 1712 aa16.08■□□□□ 0.17
PCYT1A-213ENST00000460827 GLTPD2A6NH11 291 aa16.08■□□□□ 0.16
PCYT1A-213ENST00000460827 VEGFAP15692 232 aaPredicted RBP16.08■□□□□ 0.16
PCYT1A-213ENST00000460827 LMNB1P20700 586 aa16.08■□□□□ 0.16
PCYT1A-213ENST00000460827 NFATC2IPQ8NCF5 419 aa16.08■□□□□ 0.16
PCYT1A-213ENST00000460827 TNNT2P45379 298 aaPredicted RBP16.07■□□□□ 0.16
PCYT1A-213ENST00000460827 MTHFSP49914 203 aa16.07■□□□□ 0.16
PCYT1A-213ENST00000460827 SCN11AQ9UI33 1791 aa16.07■□□□□ 0.16
PCYT1A-213ENST00000460827 POTECB2RU33 542 aa16.06■□□□□ 0.16
PCYT1A-213ENST00000460827 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
PCYT1A-213ENST00000460827 USPL1Q5W0Q7 1092 aa16.06■□□□□ 0.16
PCYT1A-213ENST00000460827 AEBP1Q8IUX7 1158 aa16.05■□□□□ 0.16
PCYT1A-213ENST00000460827 SOS1Q07889 1333 aaPredicted RBP16.04■□□□□ 0.16
PCYT1A-213ENST00000460827 NFKBIEO00221 500 aa16.04■□□□□ 0.16
PCYT1A-213ENST00000460827 NFIXQ14938 502 aa16.04■□□□□ 0.16
PCYT1A-213ENST00000460827 DICER1Q9UPY3 1922 aaKnown RBP16.04■□□□□ 0.16
PCYT1A-213ENST00000460827 ZPR1O75312 459 aa16.03■□□□□ 0.16
PCYT1A-213ENST00000460827 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
PCYT1A-213ENST00000460827 DNAJC10Q8IXB1 793 aa16.03■□□□□ 0.16
PCYT1A-213ENST00000460827 TTLL6Q8N841 843 aa16.02■□□□□ 0.16
PCYT1A-213ENST00000460827 BCL2L12Q9HB09 334 aa16.02■□□□□ 0.16
PCYT1A-213ENST00000460827 NARFQ9UHQ1 456 aa16.02■□□□□ 0.16
PCYT1A-213ENST00000460827 CYP19A1P11511 503 aaPredicted RBP16.01■□□□□ 0.15
PCYT1A-213ENST00000460827 VIRMAQ69YN4 1812 aaKnown RBP16.01■□□□□ 0.15
PCYT1A-213ENST00000460827 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
PCYT1A-213ENST00000460827 FER1L6Q2WGJ9 1857 aa16■□□□□ 0.15
PCYT1A-213ENST00000460827 ANKRD31Q8N7Z5 1873 aa16■□□□□ 0.15
PCYT1A-213ENST00000460827 SERPINB2P05120 415 aa16■□□□□ 0.15
PCYT1A-213ENST00000460827 COL15A1P39059 1388 aa16■□□□□ 0.15
PCYT1A-213ENST00000460827 POTEHQ6S545 545 aa15.99■□□□□ 0.15
PCYT1A-213ENST00000460827 C2CD5Q86YS7 1000 aa15.99■□□□□ 0.15
PCYT1A-213ENST00000460827 SULT6B1Q6IMI4 303 aa15.98■□□□□ 0.15
PCYT1A-213ENST00000460827 SLC52A2Q9HAB3 445 aa15.98■□□□□ 0.15
PCYT1A-213ENST00000460827 ZBTB1Q9Y2K1 713 aa15.98■□□□□ 0.15
PCYT1A-213ENST00000460827 MRC1P22897 1456 aa15.97■□□□□ 0.15
PCYT1A-213ENST00000460827 H0YIN7 160 aa15.97■□□□□ 0.15
PCYT1A-213ENST00000460827 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
PCYT1A-213ENST00000460827 SLC39A6Q13433 755 aa15.96■□□□□ 0.15
PCYT1A-213ENST00000460827 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.15
PCYT1A-213ENST00000460827 LGR6Q9HBX8 967 aa15.96■□□□□ 0.15
PCYT1A-213ENST00000460827 MKRN1Q9UHC7 482 aaKnown RBP15.96■□□□□ 0.15
PCYT1A-213ENST00000460827 COL11A2P13942 1736 aaPredicted RBP15.96■□□□□ 0.15
PCYT1A-213ENST00000460827 FOXN1O15353 648 aa15.95■□□□□ 0.14
PCYT1A-213ENST00000460827 POTEIP0CG38 1075 aa15.95■□□□□ 0.14
PCYT1A-213ENST00000460827 POTEJP0CG39 1038 aa15.95■□□□□ 0.14
PCYT1A-213ENST00000460827 AKAP4Q5JQC9 854 aa15.95■□□□□ 0.14
PCYT1A-213ENST00000460827 CHADLQ6NUI6 762 aa15.95■□□□□ 0.14
PCYT1A-213ENST00000460827 IL13P35225 146 aa15.94■□□□□ 0.14
PCYT1A-213ENST00000460827 ERFEQ4G0M1 354 aa15.94■□□□□ 0.14
PCYT1A-213ENST00000460827 UBR2Q8IWV8 1755 aa15.94■□□□□ 0.14
PCYT1A-213ENST00000460827 CNTNAP1P78357 1384 aa15.93■□□□□ 0.14
PCYT1A-213ENST00000460827 C21orf2O43822 256 aa15.93■□□□□ 0.14
PCYT1A-213ENST00000460827 POLR3GLQ9BT43 218 aa15.93■□□□□ 0.14
PCYT1A-213ENST00000460827 SLX4Q8IY92 1834 aa15.93■□□□□ 0.14
PCYT1A-213ENST00000460827 LTBP3Q9NS15 1303 aa15.93■□□□□ 0.14
PCYT1A-213ENST00000460827 RNMTO43148 476 aaKnown RBP15.92■□□□□ 0.14
PCYT1A-213ENST00000460827 BICDL1Q6ZP65 573 aa15.92■□□□□ 0.14
PCYT1A-213ENST00000460827 VSIG10Q8N0Z9 540 aa15.92■□□□□ 0.14
PCYT1A-213ENST00000460827 ZNF622Q969S3 477 aaKnown RBP eCLIP15.92■□□□□ 0.148e-10■□□□□ 9.4
PCYT1A-213ENST00000460827 PANK3Q9H999 370 aa15.92■□□□□ 0.14
PCYT1A-213ENST00000460827 PRDM10Q9NQV6 1147 aa15.92■□□□□ 0.14
PCYT1A-213ENST00000460827 CACNA1SQ13698 1873 aa15.91■□□□□ 0.14
PCYT1A-213ENST00000460827 DDNO94850 711 aaPredicted RBP15.91■□□□□ 0.14
PCYT1A-213ENST00000460827 EIF5P55010 431 aaKnown RBP15.91■□□□□ 0.14
PCYT1A-213ENST00000460827 BRIP1Q9BX63 1249 aa15.91■□□□□ 0.14
PCYT1A-213ENST00000460827 ZNF219Q9P2Y4 722 aaPredicted RBP15.91■□□□□ 0.14
PCYT1A-213ENST00000460827 PASKQ96RG2 1323 aa15.91■□□□□ 0.14
PCYT1A-213ENST00000460827 SCN7AQ01118 1682 aa15.9■□□□□ 0.14
PCYT1A-213ENST00000460827 CANXP27824 592 aaKnown RBP15.9■□□□□ 0.14
PCYT1A-213ENST00000460827 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
PCYT1A-213ENST00000460827 PDZRN3Q9UPQ7 1066 aa15.9■□□□□ 0.14
PCYT1A-213ENST00000460827 SCN4AP35499 1836 aa15.89■□□□□ 0.13
PCYT1A-213ENST00000460827 ABCB7O75027 752 aa15.89■□□□□ 0.13
PCYT1A-213ENST00000460827 PDE6BP35913 854 aa15.89■□□□□ 0.13
PCYT1A-213ENST00000460827 PRR5LQ6MZQ0 368 aa15.89■□□□□ 0.13
PCYT1A-213ENST00000460827 MORC1Q86VD1 984 aa15.89■□□□□ 0.13
PCYT1A-213ENST00000460827 CCDC24Q8N4L8 307 aa15.89■□□□□ 0.13
PCYT1A-213ENST00000460827 TAOK3Q9H2K8 898 aa15.89■□□□□ 0.13
PCYT1A-213ENST00000460827 ARFGEF2Q9Y6D5 1785 aa15.88■□□□□ 0.13
PCYT1A-213ENST00000460827 SLC34A2O95436 690 aa15.88■□□□□ 0.13
PCYT1A-213ENST00000460827 CTCFP49711 727 aaPredicted RBP15.87■□□□□ 0.13
PCYT1A-213ENST00000460827 VEGFBP49765 207 aa15.87■□□□□ 0.13
PCYT1A-213ENST00000460827 LDHDQ86WU2 507 aa15.87■□□□□ 0.13
PCYT1A-213ENST00000460827 L3MBTL3Q96JM7 780 aaPredicted RBP15.87■□□□□ 0.13
PCYT1A-213ENST00000460827 TNRC18O15417 2968 aaPredicted RBP15.87■□□□□ 0.13
PCYT1A-213ENST00000460827 A0A087WZG4 1122 aa15.86■□□□□ 0.13
PCYT1A-213ENST00000460827 ZBTB22O15209 634 aa15.86■□□□□ 0.13
PCYT1A-213ENST00000460827 STARD3NLO95772 234 aa15.86■□□□□ 0.13
PCYT1A-213ENST00000460827 ITGBL1O95965 494 aaPredicted RBP15.86■□□□□ 0.13
PCYT1A-213ENST00000460827 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
PCYT1A-213ENST00000460827 SRGNP10124 158 aa15.85■□□□□ 0.13
PCYT1A-213ENST00000460827 MTHFSDQ2M296 383 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms