RNA–Protein interactions for RNA: ENST00000460628.1

PSMD2-209, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-209	ENST00000460628	HEG1	Q9ULI3	1381 aa		12.49	□□□□□ -0.41
PSMD2-209	ENST00000460628	POLRMT	O00411	1230 aa	Known RBP	12.49	□□□□□ -0.41
PSMD2-209	ENST00000460628	NARF	Q9UHQ1	456 aa		12.49	□□□□□ -0.41
PSMD2-209	ENST00000460628	FCHSD2	O94868	740 aa		12.48	□□□□□ -0.41
PSMD2-209	ENST00000460628	CANX	P27824	592 aa	Known RBP	12.48	□□□□□ -0.41
PSMD2-209	ENST00000460628	TM4SF1	P30408	202 aa		12.48	□□□□□ -0.41
PSMD2-209	ENST00000460628	MYH14	Q7Z406	1995 aa	Known RBP	12.48	□□□□□ -0.41
PSMD2-209	ENST00000460628	CHD4	Q14839	1912 aa		12.48	□□□□□ -0.41
PSMD2-209	ENST00000460628	KCNA3	P22001	575 aa		12.47	□□□□□ -0.41
PSMD2-209	ENST00000460628	NFIX	Q14938	502 aa		12.47	□□□□□ -0.41
PSMD2-209	ENST00000460628	ZNF526	Q8TF50	670 aa	Predicted RBP	12.47	□□□□□ -0.41
PSMD2-209	ENST00000460628	FMNL2	Q96PY5	1086 aa		12.47	□□□□□ -0.41
PSMD2-209	ENST00000460628	BCL2L12	Q9HB09	334 aa		12.47	□□□□□ -0.41
PSMD2-209	ENST00000460628	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.47	□□□□□ -0.41
PSMD2-209	ENST00000460628	KIAA1551	Q9HCM1	1747 aa		12.46	□□□□□ -0.41
PSMD2-209	ENST00000460628	SENP3-EIF4A1	A0A087X0R7	540 aa		12.46	□□□□□ -0.41
PSMD2-209	ENST00000460628	BTBD11	A6QL63	1104 aa		12.46	□□□□□ -0.41
PSMD2-209	ENST00000460628	KCNQ3	O43525	872 aa		12.46	□□□□□ -0.41
PSMD2-209	ENST00000460628	CHRNA5	P30532	468 aa		12.46	□□□□□ -0.41
PSMD2-209	ENST00000460628	EIF5	P55010	431 aa	Known RBP	12.46	□□□□□ -0.41
PSMD2-209	ENST00000460628	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.46	□□□□□ -0.41
PSMD2-209	ENST00000460628	DALRD3	Q5D0E6	543 aa	Known RBP	12.45	□□□□□ -0.42
PSMD2-209	ENST00000460628	ARHGAP27	Q6ZUM4	889 aa		12.45	□□□□□ -0.42
PSMD2-209	ENST00000460628	MCM10	Q7L590	875 aa		12.45	□□□□□ -0.42
PSMD2-209	ENST00000460628	RTF1	Q92541	710 aa	Known RBP	12.45	□□□□□ -0.42
PSMD2-209	ENST00000460628	PIM2	Q9P1W9	311 aa		12.45	□□□□□ -0.42
PSMD2-209	ENST00000460628	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.45	□□□□□ -0.42
PSMD2-209	ENST00000460628	KIF13B	Q9NQT8	1826 aa		12.44	□□□□□ -0.42
PSMD2-209	ENST00000460628	UBR2	Q8IWV8	1755 aa		12.44	□□□□□ -0.42
PSMD2-209	ENST00000460628		A0A087WZG4	1122 aa		12.44	□□□□□ -0.42
PSMD2-209	ENST00000460628	SERPINB2	P05120	415 aa		12.43	□□□□□ -0.42
PSMD2-209	ENST00000460628	IL6ST	P40189	918 aa	Predicted RBP	12.43	□□□□□ -0.42
PSMD2-209	ENST00000460628	DCTN1	Q14203	1278 aa		12.43	□□□□□ -0.42
PSMD2-209	ENST00000460628	BICDL1	Q6ZP65	573 aa		12.43	□□□□□ -0.42
PSMD2-209	ENST00000460628	CARMIL3	Q8ND23	1372 aa		12.43	□□□□□ -0.42
PSMD2-209	ENST00000460628	HTATSF1	O43719	755 aa	Known RBP	12.42	□□□□□ -0.42
PSMD2-209	ENST00000460628	A1BG	P04217	495 aa		12.42	□□□□□ -0.42
PSMD2-209	ENST00000460628	TBC1D2B	Q9UPU7	963 aa		12.42	□□□□□ -0.42
PSMD2-209	ENST00000460628	PRAMEF22	A3QJZ6	481 aa		12.41	□□□□□ -0.42
PSMD2-209	ENST00000460628	NEFM	P07197	916 aa		12.41	□□□□□ -0.42
PSMD2-209	ENST00000460628	TBC1D9B	Q66K14	1250 aa		12.41	□□□□□ -0.42
PSMD2-209	ENST00000460628	NPM2	Q86SE8	214 aa	Known RBP	12.41	□□□□□ -0.42
PSMD2-209	ENST00000460628	CAMTA2	O94983	1202 aa		12.4	□□□□□ -0.42
PSMD2-209	ENST00000460628	SNRPA1	P09661	255 aa	Known RBP	12.4	□□□□□ -0.42
PSMD2-209	ENST00000460628	PIP4K2A	P48426	406 aa	Predicted RBP	12.4	□□□□□ -0.42
PSMD2-209	ENST00000460628	C9orf131	Q5VYM1	1079 aa		12.4	□□□□□ -0.42
PSMD2-209	ENST00000460628	USP16	Q9Y5T5	823 aa		12.4	□□□□□ -0.42
PSMD2-209	ENST00000460628	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.4	□□□□□ -0.42
PSMD2-209	ENST00000460628	SIPA1L3	O60292	1781 aa	Predicted RBP	12.39	□□□□□ -0.43
PSMD2-209	ENST00000460628	KIF3C	O14782	793 aa		12.39	□□□□□ -0.43
PSMD2-209	ENST00000460628	DZIP3	Q86Y13	1208 aa	Known RBP	12.39	□□□□□ -0.43
PSMD2-209	ENST00000460628	C2CD5	Q86YS7	1000 aa		12.39	□□□□□ -0.43
PSMD2-209	ENST00000460628	PLEKHF1	Q96S99	279 aa		12.39	□□□□□ -0.43
PSMD2-209	ENST00000460628	SCN7A	Q01118	1682 aa		12.38	□□□□□ -0.43
PSMD2-209	ENST00000460628	MAPK8IP3	Q9UPT6	1336 aa		12.38	□□□□□ -0.43
PSMD2-209	ENST00000460628	TAF7	Q15545	349 aa	Predicted RBP	12.38	□□□□□ -0.43
PSMD2-209	ENST00000460628	NFE2L2	Q16236	605 aa		12.38	□□□□□ -0.43
PSMD2-209	ENST00000460628	PRR5L	Q6MZQ0	368 aa		12.38	□□□□□ -0.43
PSMD2-209	ENST00000460628	MIS18A	Q9NYP9	233 aa		12.38	□□□□□ -0.43
PSMD2-209	ENST00000460628	RNF181	Q9P0P0	153 aa		12.38	□□□□□ -0.43
PSMD2-209	ENST00000460628	CEP350	Q5VT06	3117 aa		12.37	□□□□□ -0.43
PSMD2-209	ENST00000460628		H0YIN7	160 aa		12.37	□□□□□ -0.43
PSMD2-209	ENST00000460628	RALBP1	Q15311	655 aa		12.37	□□□□□ -0.43
PSMD2-209	ENST00000460628	CCDC24	Q8N4L8	307 aa		12.37	□□□□□ -0.43
PSMD2-209	ENST00000460628	TTLL6	Q8N841	843 aa		12.37	□□□□□ -0.43
PSMD2-209	ENST00000460628	CNBD1	Q8NA66	436 aa		12.37	□□□□□ -0.43
PSMD2-209	ENST00000460628	SETDB2	Q96T68	719 aa		12.37	□□□□□ -0.43
PSMD2-209	ENST00000460628	THUMPD2	Q9BTF0	503 aa	Known RBP	12.37	□□□□□ -0.43
PSMD2-209	ENST00000460628	NRXN2	Q9P2S2	1712 aa		12.37	□□□□□ -0.43
PSMD2-209	ENST00000460628	NBPF26	B4DH59	902 aa		12.36	□□□□□ -0.43
PSMD2-209	ENST00000460628	NPHP1	O15259	732 aa		12.36	□□□□□ -0.43
PSMD2-209	ENST00000460628	RASSF7	Q02833	373 aa		12.36	□□□□□ -0.43
PSMD2-209	ENST00000460628	NBPF10	Q6P3W6	841 aa	Known RBP	12.36	□□□□□ -0.43
PSMD2-209	ENST00000460628	NBPF15	Q8N660	670 aa		12.36	□□□□□ -0.43
PSMD2-209	ENST00000460628	PNISR	Q8TF01	805 aa	Known RBP	12.36	□□□□□ -0.43
PSMD2-209	ENST00000460628	BRIP1	Q9BX63	1249 aa		12.36	□□□□□ -0.43
PSMD2-209	ENST00000460628	PDE6B	P35913	854 aa		12.35	□□□□□ -0.43
PSMD2-209	ENST00000460628	DDX10	Q13206	875 aa	Known RBP	12.35	□□□□□ -0.43
PSMD2-209	ENST00000460628	PNN	Q9H307	717 aa	Known RBP	12.35	□□□□□ -0.43
PSMD2-209	ENST00000460628	NMRK2	Q9NPI5	230 aa		12.35	□□□□□ -0.43
PSMD2-209	ENST00000460628	PDZRN3	Q9UPQ7	1066 aa		12.35	□□□□□ -0.43
PSMD2-209	ENST00000460628	ZNF652	Q9Y2D9	606 aa		12.35	□□□□□ -0.43
PSMD2-209	ENST00000460628	BRCA1	P38398	1863 aa	Known RBP	12.35	□□□□□ -0.43
PSMD2-209	ENST00000460628	VIRMA	Q69YN4	1812 aa	Known RBP	12.34	□□□□□ -0.43
PSMD2-209	ENST00000460628	ST5	P78524	1137 aa		12.34	□□□□□ -0.43
PSMD2-209	ENST00000460628	NFKBIE	O00221	500 aa		12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	RGL2	O15211	777 aa		12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	HSPA6	P17066	643 aa		12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	LMNB1	P20700	586 aa		12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	PRELP	P51888	382 aa		12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	EIF4A1	P60842	406 aa	Known RBP	12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	CLEC4G	Q6UXB4	293 aa		12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	KDM2B	Q8NHM5	1336 aa		12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.33	□□□□□ -0.44
PSMD2-209	ENST00000460628	TOMM70	O94826	608 aa		12.32	□□□□□ -0.44
PSMD2-209	ENST00000460628	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
PSMD2-209	ENST00000460628	TSPYL4	Q9UJ04	414 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms