RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 FMNL2Q96PY5 1086 aa21.72■■□□□ 1.07
SMARCD3-204ENST00000460431 CCDC87Q9NVE4 849 aa21.72■■□□□ 1.07
SMARCD3-204ENST00000460431 HEG1Q9ULI3 1381 aa21.72■■□□□ 1.07
SMARCD3-204ENST00000460431 RIPK4P57078 832 aa21.71■■□□□ 1.07
SMARCD3-204ENST00000460431 CCDC184Q52MB2 194 aa21.71■■□□□ 1.07
SMARCD3-204ENST00000460431 TEX13AQ9BXU3 409 aaPredicted RBP21.71■■□□□ 1.07
SMARCD3-204ENST00000460431 STARD3NLO95772 234 aa21.69■■□□□ 1.06
SMARCD3-204ENST00000460431 THUMPD2Q9BTF0 503 aaKnown RBP21.69■■□□□ 1.06
SMARCD3-204ENST00000460431 RFC4P35249 363 aa21.68■■□□□ 1.06
SMARCD3-204ENST00000460431 C4AP0C0L4 1744 aa21.68■■□□□ 1.06
SMARCD3-204ENST00000460431 GRIN3BO60391 1043 aa21.67■■□□□ 1.06
SMARCD3-204ENST00000460431 PNISRQ8TF01 805 aaKnown RBP21.67■■□□□ 1.06
SMARCD3-204ENST00000460431 MIS18AQ9NYP9 233 aa21.67■■□□□ 1.06
SMARCD3-204ENST00000460431 CHD4Q14839 1912 aa21.67■■□□□ 1.06
SMARCD3-204ENST00000460431 SOS1Q07889 1333 aaPredicted RBP21.66■■□□□ 1.06
SMARCD3-204ENST00000460431 LMOD3Q0VAK6 560 aa21.66■■□□□ 1.06
SMARCD3-204ENST00000460431 ZBTB1Q9Y2K1 713 aa21.66■■□□□ 1.06
SMARCD3-204ENST00000460431 RRP7AQ9Y3A4 280 aaKnown RBP21.66■■□□□ 1.06
SMARCD3-204ENST00000460431 KDM3BQ7LBC6 1761 aa21.66■■□□□ 1.06
SMARCD3-204ENST00000460431 GOLGB1Q14789 3259 aaKnown RBP21.65■■□□□ 1.06
SMARCD3-204ENST00000460431 NLGN1Q8N2Q7 840 aa21.65■■□□□ 1.06
SMARCD3-204ENST00000460431 SNRPA1P09661 255 aaKnown RBP21.64■■□□□ 1.05
SMARCD3-204ENST00000460431 GYS1P13807 737 aa21.64■■□□□ 1.05
SMARCD3-204ENST00000460431 NEUROD2Q15784 382 aa21.64■■□□□ 1.05
SMARCD3-204ENST00000460431 CANXP27824 592 aaKnown RBP21.63■■□□□ 1.05
SMARCD3-204ENST00000460431 TRIM35Q9UPQ4 493 aa21.63■■□□□ 1.05
SMARCD3-204ENST00000460431 USP16Q9Y5T5 823 aa21.63■■□□□ 1.05
SMARCD3-204ENST00000460431 USP42Q9H9J4 1324 aaKnown RBP21.62■■□□□ 1.05
SMARCD3-204ENST00000460431 MMP10P09238 476 aa21.62■■□□□ 1.05
SMARCD3-204ENST00000460431 EIF5P55010 431 aaKnown RBP21.62■■□□□ 1.05
SMARCD3-204ENST00000460431 PRAMEF22A3QJZ6 481 aa21.61■■□□□ 1.05
SMARCD3-204ENST00000460431 A1BGP04217 495 aa21.61■■□□□ 1.05
SMARCD3-204ENST00000460431 MRS2Q9HD23 443 aa21.61■■□□□ 1.05
SMARCD3-204ENST00000460431 BABAM1Q9NWV8 329 aa21.61■■□□□ 1.05
SMARCD3-204ENST00000460431 SRP68Q9UHB9 627 aaKnown RBP21.61■■□□□ 1.05
SMARCD3-204ENST00000460431 COL15A1P39059 1388 aa21.61■■□□□ 1.05
SMARCD3-204ENST00000460431 APAF1O14727 1248 aa21.6■■□□□ 1.05
SMARCD3-204ENST00000460431 EIF4A1P60842 406 aaKnown RBP21.6■■□□□ 1.05
SMARCD3-204ENST00000460431 ZPR1O75312 459 aa21.59■■□□□ 1.05
SMARCD3-204ENST00000460431 IL6STP40189 918 aaPredicted RBP21.59■■□□□ 1.05
SMARCD3-204ENST00000460431 NARFQ9UHQ1 456 aa21.59■■□□□ 1.05
SMARCD3-204ENST00000460431 A0A087WZG4 1122 aa21.57■■□□□ 1.04
SMARCD3-204ENST00000460431 GIGYF1O75420 1035 aaPredicted RBP21.57■■□□□ 1.04
SMARCD3-204ENST00000460431 FKBP8Q14318 412 aa21.57■■□□□ 1.04
SMARCD3-204ENST00000460431 USPL1Q5W0Q7 1092 aa21.57■■□□□ 1.04
SMARCD3-204ENST00000460431 TSPYL4Q9UJ04 414 aa21.57■■□□□ 1.04
SMARCD3-204ENST00000460431 WWC3Q9ULE0 1092 aa21.56■■□□□ 1.04
SMARCD3-204ENST00000460431 CHL1O00533 1208 aa21.55■■□□□ 1.04
SMARCD3-204ENST00000460431 LAMB4A4D0S4 1761 aa21.55■■□□□ 1.04
SMARCD3-204ENST00000460431 TM4SF1P30408 202 aa21.54■■□□□ 1.04
SMARCD3-204ENST00000460431 BCL2L12Q9HB09 334 aa21.54■■□□□ 1.04
SMARCD3-204ENST00000460431 NBPF26B4DH59 902 aa21.53■■□□□ 1.04
SMARCD3-204ENST00000460431 NBPF10Q6P3W6 841 aaKnown RBP21.53■■□□□ 1.04
SMARCD3-204ENST00000460431 NBPF15Q8N660 670 aa21.53■■□□□ 1.04
SMARCD3-204ENST00000460431 ZNF330Q9Y3S2 320 aaPredicted RBP21.53■■□□□ 1.04
SMARCD3-204ENST00000460431 PARP3Q9Y6F1 533 aa21.53■■□□□ 1.04
SMARCD3-204ENST00000460431 KIF13BQ9NQT8 1826 aa21.52■■□□□ 1.04
SMARCD3-204ENST00000460431 PXDNLA1KZ92 1463 aa21.52■■□□□ 1.04
SMARCD3-204ENST00000460431 PIP4K2AP48426 406 aaPredicted RBP21.52■■□□□ 1.04
SMARCD3-204ENST00000460431 C1QTNF8P60827 252 aa21.52■■□□□ 1.04
SMARCD3-204ENST00000460431 TGFB2P61812 414 aa21.52■■□□□ 1.04
SMARCD3-204ENST00000460431 NPM2Q86SE8 214 aaKnown RBP21.52■■□□□ 1.04
SMARCD3-204ENST00000460431 TBC1D2BQ9UPU7 963 aa21.52■■□□□ 1.04
SMARCD3-204ENST00000460431 DDR1Q08345 913 aa21.51■■□□□ 1.03
SMARCD3-204ENST00000460431 C10orf71Q711Q0 1435 aa21.51■■□□□ 1.03
SMARCD3-204ENST00000460431 A0A0G2JLW4 131 aa21.5■■□□□ 1.03
SMARCD3-204ENST00000460431 CFAP44Q96MT7 982 aa21.5■■□□□ 1.03
SMARCD3-204ENST00000460431 LAS1LQ9Y4W2 734 aaKnown RBP21.5■■□□□ 1.03
SMARCD3-204ENST00000460431 POLRMTO00411 1230 aaKnown RBP21.49■■□□□ 1.03
SMARCD3-204ENST00000460431 NFIXQ14938 502 aa21.49■■□□□ 1.03
SMARCD3-204ENST00000460431 AFDNP55196 1824 aaKnown RBP21.48■■□□□ 1.03
SMARCD3-204ENST00000460431 ATP10DQ9P241 1426 aa21.48■■□□□ 1.03
SMARCD3-204ENST00000460431 CAMTA2O94983 1202 aa21.48■■□□□ 1.03
SMARCD3-204ENST00000460431 ZNF853P0CG23 659 aa21.48■■□□□ 1.03
SMARCD3-204ENST00000460431 CALD1Q05682 793 aaKnown RBP21.48■■□□□ 1.03
SMARCD3-204ENST00000460431 DZIP3Q86Y13 1208 aaKnown RBP21.48■■□□□ 1.03
SMARCD3-204ENST00000460431 ADCY9O60503 1353 aa21.48■■□□□ 1.03
SMARCD3-204ENST00000460431 SCN7AQ01118 1682 aa21.47■■□□□ 1.03
SMARCD3-204ENST00000460431 DPEP1P16444 411 aa21.47■■□□□ 1.03
SMARCD3-204ENST00000460431 CCDC27Q2M243 656 aa21.47■■□□□ 1.03
SMARCD3-204ENST00000460431 NCBP3Q53F19 620 aaKnown RBP21.47■■□□□ 1.03
SMARCD3-204ENST00000460431 KIAA1551Q9HCM1 1747 aa21.46■■□□□ 1.03
SMARCD3-204ENST00000460431 BCORQ6W2J9 1755 aa21.46■■□□□ 1.03
SMARCD3-204ENST00000460431 KCNA3P22001 575 aa21.45■■□□□ 1.02
SMARCD3-204ENST00000460431 TBC1D9BQ66K14 1250 aa21.45■■□□□ 1.02
SMARCD3-204ENST00000460431 IFT57Q9NWB7 429 aa21.45■■□□□ 1.02
SMARCD3-204ENST00000460431 NRXN2Q9P2S2 1712 aa21.45■■□□□ 1.02
SMARCD3-204ENST00000460431 ERBB4Q15303 1308 aa21.45■■□□□ 1.02
SMARCD3-204ENST00000460431 GNAI1P63096 354 aa21.44■■□□□ 1.02
SMARCD3-204ENST00000460431 KRT24Q2M2I5 525 aa21.44■■□□□ 1.02
SMARCD3-204ENST00000460431 CLEC4GQ6UXB4 293 aa21.44■■□□□ 1.02
SMARCD3-204ENST00000460431 FAM9BQ8IZU0 186 aa21.44■■□□□ 1.02
SMARCD3-204ENST00000460431 MBIPQ9NS73 344 aa21.44■■□□□ 1.02
SMARCD3-204ENST00000460431 BCS1LQ9Y276 419 aa21.44■■□□□ 1.02
SMARCD3-204ENST00000460431 N4BP2Q86UW6 1770 aaPredicted RBP21.43■■□□□ 1.02
SMARCD3-204ENST00000460431 RGL2O15211 777 aa21.43■■□□□ 1.02
SMARCD3-204ENST00000460431 SERPINB2P05120 415 aa21.43■■□□□ 1.02
SMARCD3-204ENST00000460431 EIF2S2P20042 333 aaKnown RBP21.43■■□□□ 1.02
SMARCD3-204ENST00000460431 BICDL1Q6ZP65 573 aa21.43■■□□□ 1.02
SMARCD3-204ENST00000460431 WWC1Q8IX03 1113 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms