RNA–Protein interactions for RNA: ENST00000460410.5

NEPRO-203, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 3

Gene NEPRO, Length 947 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-203ENST00000460410 LGR6Q9HBX8 967 aa20.5■□□□□ 0.87
NEPRO-203ENST00000460410 FER1L6Q2WGJ9 1857 aa20.5■□□□□ 0.87
NEPRO-203ENST00000460410 USPL1Q5W0Q7 1092 aa20.49■□□□□ 0.87
NEPRO-203ENST00000460410 POLRMTO00411 1230 aaKnown RBP20.48■□□□□ 0.87
NEPRO-203ENST00000460410 DALRD3Q5D0E6 543 aaKnown RBP20.48■□□□□ 0.87
NEPRO-203ENST00000460410 SLC52A2Q9HAB3 445 aa20.48■□□□□ 0.87
NEPRO-203ENST00000460410 RNF181Q9P0P0 153 aa20.48■□□□□ 0.87
NEPRO-203ENST00000460410 BCORQ6W2J9 1755 aa20.48■□□□□ 0.87
NEPRO-203ENST00000460410 ZPR1O75312 459 aa20.47■□□□□ 0.87
NEPRO-203ENST00000460410 APLP1P51693 650 aa20.47■□□□□ 0.87
NEPRO-203ENST00000460410 HTRA3P83110 453 aa20.47■□□□□ 0.87
NEPRO-203ENST00000460410 AKAP4Q5JQC9 854 aa20.47■□□□□ 0.87
NEPRO-203ENST00000460410 COL15A1P39059 1388 aa20.46■□□□□ 0.87
NEPRO-203ENST00000460410 SOS1Q07889 1333 aaPredicted RBP20.46■□□□□ 0.87
NEPRO-203ENST00000460410 ARFGEF2Q9Y6D5 1785 aa20.46■□□□□ 0.87
NEPRO-203ENST00000460410 RASSF7Q02833 373 aa20.45■□□□□ 0.86
NEPRO-203ENST00000460410 CNGB1Q14028 1251 aaPredicted RBP20.45■□□□□ 0.86
NEPRO-203ENST00000460410 ZBTB1Q9Y2K1 713 aa20.45■□□□□ 0.86
NEPRO-203ENST00000460410 RNMTO43148 476 aaKnown RBP20.44■□□□□ 0.86
NEPRO-203ENST00000460410 AMER1Q5JTC6 1135 aaPredicted RBP20.44■□□□□ 0.86
NEPRO-203ENST00000460410 C16orf71Q8IYS4 520 aaPredicted RBP20.44■□□□□ 0.86
NEPRO-203ENST00000460410 SLX4Q8IY92 1834 aa20.43■□□□□ 0.86
NEPRO-203ENST00000460410 CYP19A1P11511 503 aaPredicted RBP20.43■□□□□ 0.86
NEPRO-203ENST00000460410 TM4SF1P30408 202 aa20.43■□□□□ 0.86
NEPRO-203ENST00000460410 NFIXQ14938 502 aa20.42■□□□□ 0.86
NEPRO-203ENST00000460410 MTHFSDQ2M296 383 aaKnown RBP20.42■□□□□ 0.86
NEPRO-203ENST00000460410 CC2D1BQ5T0F9 858 aaKnown RBP20.42■□□□□ 0.86
NEPRO-203ENST00000460410 CCER1Q8TC90 406 aaPredicted RBP20.42■□□□□ 0.86
NEPRO-203ENST00000460410 RRAGCQ9HB90 399 aa20.42■□□□□ 0.86
NEPRO-203ENST00000460410 DLG5Q8TDM6 1919 aa20.42■□□□□ 0.86
NEPRO-203ENST00000460410 CARMIL3Q8ND23 1372 aa20.42■□□□□ 0.86
NEPRO-203ENST00000460410 DNAJC5GQ8N7S2 189 aa20.41■□□□□ 0.86
NEPRO-203ENST00000460410 KIF7Q2M1P5 1343 aa20.41■□□□□ 0.86
NEPRO-203ENST00000460410 CANXP27824 592 aaKnown RBP20.4■□□□□ 0.86
NEPRO-203ENST00000460410 KDM2BQ8NHM5 1336 aa20.4■□□□□ 0.86
NEPRO-203ENST00000460410 RBM46Q8TBY0 533 aaKnown RBP20.4■□□□□ 0.86
NEPRO-203ENST00000460410 BICDL1Q6ZP65 573 aa20.39■□□□□ 0.85
NEPRO-203ENST00000460410 BCL2L12Q9HB09 334 aa20.39■□□□□ 0.85
NEPRO-203ENST00000460410 NARFQ9UHQ1 456 aa20.39■□□□□ 0.85
NEPRO-203ENST00000460410 COL3A1P02461 1466 aaPredicted RBP20.38■□□□□ 0.85
NEPRO-203ENST00000460410 DIAPH1O60610 1272 aaKnown RBP20.37■□□□□ 0.85
NEPRO-203ENST00000460410 SERPINB2P05120 415 aa20.37■□□□□ 0.85
NEPRO-203ENST00000460410 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
NEPRO-203ENST00000460410 PRELPP51888 382 aa20.36■□□□□ 0.85
NEPRO-203ENST00000460410 C2CD5Q86YS7 1000 aa20.35■□□□□ 0.85
NEPRO-203ENST00000460410 CCDC24Q8N4L8 307 aa20.35■□□□□ 0.85
NEPRO-203ENST00000460410 TTC5Q8N0Z6 440 aa20.34■□□□□ 0.85
NEPRO-203ENST00000460410 ZNF219Q9P2Y4 722 aaPredicted RBP20.34■□□□□ 0.85
NEPRO-203ENST00000460410 NUP98P52948 1817 aa20.33■□□□□ 0.85
NEPRO-203ENST00000460410 U2SURPO15042 1029 aaKnown RBP20.33■□□□□ 0.85
NEPRO-203ENST00000460410 FSTL1Q12841 308 aa20.32■□□□□ 0.84
NEPRO-203ENST00000460410 KLRG1Q96E93 195 aa20.32■□□□□ 0.84
NEPRO-203ENST00000460410 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
NEPRO-203ENST00000460410 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
NEPRO-203ENST00000460410 VSIG10Q8N0Z9 540 aa20.31■□□□□ 0.84
NEPRO-203ENST00000460410 TTLL6Q8N841 843 aa20.31■□□□□ 0.84
NEPRO-203ENST00000460410 ZNF496Q96IT1 587 aaPredicted RBP20.31■□□□□ 0.84
NEPRO-203ENST00000460410 H0YIN7 160 aa20.3■□□□□ 0.84
NEPRO-203ENST00000460410 PER1O15534 1290 aaPredicted RBP20.3■□□□□ 0.84
NEPRO-203ENST00000460410 LMNB1P20700 586 aa20.3■□□□□ 0.84
NEPRO-203ENST00000460410 TBC1D2BQ9UPU7 963 aa20.3■□□□□ 0.84
NEPRO-203ENST00000460410 HEG1Q9ULI3 1381 aa20.3■□□□□ 0.84
NEPRO-203ENST00000460410 NFKBIEO00221 500 aa20.29■□□□□ 0.84
NEPRO-203ENST00000460410 EIF5P55010 431 aaKnown RBP20.29■□□□□ 0.84
NEPRO-203ENST00000460410 TEFQ10587 303 aa20.29■□□□□ 0.84
NEPRO-203ENST00000460410 ZNF622Q969S3 477 aaKnown RBP eCLIP20.29■□□□□ 0.84
NEPRO-203ENST00000460410 STARD3NLO95772 234 aa20.28■□□□□ 0.84
NEPRO-203ENST00000460410 SMC1BQ8NDV3 1235 aa20.28■□□□□ 0.84
NEPRO-203ENST00000460410 IL17REQ8NFR9 667 aa20.28■□□□□ 0.84
NEPRO-203ENST00000460410 SCN4AP35499 1836 aa20.27■□□□□ 0.84
NEPRO-203ENST00000460410 GLTPD2A6NH11 291 aa20.27■□□□□ 0.84
NEPRO-203ENST00000460410 ZNF790Q6PG37 636 aa20.27■□□□□ 0.84
NEPRO-203ENST00000460410 GNAT3A8MTJ3 354 aa20.26■□□□□ 0.83
NEPRO-203ENST00000460410 PIP4K2AP48426 406 aaPredicted RBP20.26■□□□□ 0.83
NEPRO-203ENST00000460410 ZC3H4Q9UPT8 1303 aaKnown RBP20.26■□□□□ 0.83
NEPRO-203ENST00000460410 KCNQ3O43525 872 aa20.25■□□□□ 0.83
NEPRO-203ENST00000460410 C21orf2O43822 256 aa20.25■□□□□ 0.83
NEPRO-203ENST00000460410 A1BGP04217 495 aa20.25■□□□□ 0.83
NEPRO-203ENST00000460410 COL13A1Q5TAT6 717 aaPredicted RBP20.25■□□□□ 0.83
NEPRO-203ENST00000460410 PRR5LQ6MZQ0 368 aa20.25■□□□□ 0.83
NEPRO-203ENST00000460410 A0A087WZG4 1122 aa20.24■□□□□ 0.83
NEPRO-203ENST00000460410 NPHP1O15259 732 aa20.24■□□□□ 0.83
NEPRO-203ENST00000460410 VEGFAP15692 232 aaPredicted RBP20.24■□□□□ 0.83
NEPRO-203ENST00000460410 GAS2L2Q8NHY3 880 aa20.24■□□□□ 0.83
NEPRO-203ENST00000460410 JMYQ8N9B5 988 aa20.23■□□□□ 0.83
NEPRO-203ENST00000460410 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
NEPRO-203ENST00000460410 CAPN15O75808 1086 aa20.22■□□□□ 0.83
NEPRO-203ENST00000460410 PRAMEF22A3QJZ6 481 aa20.21■□□□□ 0.83
NEPRO-203ENST00000460410 PDE6BP35913 854 aa20.21■□□□□ 0.83
NEPRO-203ENST00000460410 PHACTR3Q96KR7 559 aa20.21■□□□□ 0.83
NEPRO-203ENST00000460410 FMNL2Q96PY5 1086 aa20.21■□□□□ 0.83
NEPRO-203ENST00000460410 POTECB2RU33 542 aa20.2■□□□□ 0.82
NEPRO-203ENST00000460410 CAMTA2O94983 1202 aa20.2■□□□□ 0.82
NEPRO-203ENST00000460410 PRKAR2BP31323 418 aa20.2■□□□□ 0.82
NEPRO-203ENST00000460410 IL6STP40189 918 aaPredicted RBP20.2■□□□□ 0.82
NEPRO-203ENST00000460410 ERFEQ4G0M1 354 aa20.2■□□□□ 0.82
NEPRO-203ENST00000460410 CNBD1Q8NA66 436 aa20.2■□□□□ 0.82
NEPRO-203ENST00000460410 BRIP1Q9BX63 1249 aa20.2■□□□□ 0.82
NEPRO-203ENST00000460410 CEMIPQ8WUJ3 1361 aa20.2■□□□□ 0.82
NEPRO-203ENST00000460410 BTBD11A6QL63 1104 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms