RNA–Protein interactions for RNA: ENST00000460405.5

LDHA-207, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-207ENST00000460405 DDR1Q08345 913 aa13.53□□□□□ -0.24
LDHA-207ENST00000460405 NPM2Q86SE8 214 aaKnown RBP13.53□□□□□ -0.24
LDHA-207ENST00000460405 FMNL2Q96PY5 1086 aa13.53□□□□□ -0.24
LDHA-207ENST00000460405 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
LDHA-207ENST00000460405 GPBP1L1Q9HC44 474 aaPredicted RBP13.53□□□□□ -0.24
LDHA-207ENST00000460405 PIM2Q9P1W9 311 aa13.53□□□□□ -0.24
LDHA-207ENST00000460405 C10orf71Q711Q0 1435 aa13.53□□□□□ -0.24
LDHA-207ENST00000460405 SCN11AQ9UI33 1791 aa13.53□□□□□ -0.24
LDHA-207ENST00000460405 POLRMTO00411 1230 aaKnown RBP13.52□□□□□ -0.25
LDHA-207ENST00000460405 NEFMP07197 916 aa13.52□□□□□ -0.25
LDHA-207ENST00000460405 ARHGAP27Q6ZUM4 889 aa13.52□□□□□ -0.25
LDHA-207ENST00000460405 PXDNLA1KZ92 1463 aa13.52□□□□□ -0.25
LDHA-207ENST00000460405 CICQ96RK0 1608 aaPredicted RBP13.52□□□□□ -0.25
LDHA-207ENST00000460405 MYH14Q7Z406 1995 aaKnown RBP13.52□□□□□ -0.25
LDHA-207ENST00000460405 COL5A3P25940 1745 aaPredicted RBP13.51□□□□□ -0.25
LDHA-207ENST00000460405 COL15A1P39059 1388 aa13.51□□□□□ -0.25
LDHA-207ENST00000460405 CEMIPQ8WUJ3 1361 aa13.51□□□□□ -0.25
LDHA-207ENST00000460405 HEG1Q9ULI3 1381 aa13.51□□□□□ -0.25
LDHA-207ENST00000460405 KCNA3P22001 575 aa13.51□□□□□ -0.25
LDHA-207ENST00000460405 EIF5P55010 431 aaKnown RBP13.51□□□□□ -0.25
LDHA-207ENST00000460405 NFIXQ14938 502 aa13.51□□□□□ -0.25
LDHA-207ENST00000460405 DALRD3Q5D0E6 543 aaKnown RBP13.51□□□□□ -0.25
LDHA-207ENST00000460405 ATP10DQ9P241 1426 aa13.5□□□□□ -0.25
LDHA-207ENST00000460405 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
LDHA-207ENST00000460405 ZNF330Q9Y3S2 320 aaPredicted RBP13.5□□□□□ -0.25
LDHA-207ENST00000460405 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
LDHA-207ENST00000460405 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
LDHA-207ENST00000460405 SERPINB2P05120 415 aa13.49□□□□□ -0.25
LDHA-207ENST00000460405 IL6STP40189 918 aaPredicted RBP13.49□□□□□ -0.25
LDHA-207ENST00000460405 MCM10Q7L590 875 aa13.49□□□□□ -0.25
LDHA-207ENST00000460405 ZNF526Q8TF50 670 aaPredicted RBP13.49□□□□□ -0.25
LDHA-207ENST00000460405 KCNQ3O43525 872 aa13.48□□□□□ -0.25
LDHA-207ENST00000460405 CHRNA5P30532 468 aa13.48□□□□□ -0.25
LDHA-207ENST00000460405 PNNQ9H307 717 aaKnown RBP13.48□□□□□ -0.25
LDHA-207ENST00000460405 BCL2L12Q9HB09 334 aa13.48□□□□□ -0.25
LDHA-207ENST00000460405 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
LDHA-207ENST00000460405 C4AP0C0L4 1744 aa13.47□□□□□ -0.25
LDHA-207ENST00000460405 ADCY9O60503 1353 aa13.47□□□□□ -0.25
LDHA-207ENST00000460405 A1BGP04217 495 aa13.47□□□□□ -0.25
LDHA-207ENST00000460405 SNRPA1P09661 255 aaKnown RBP13.47□□□□□ -0.25
LDHA-207ENST00000460405 TAF7Q15545 349 aaPredicted RBP13.47□□□□□ -0.25
LDHA-207ENST00000460405 BICDL1Q6ZP65 573 aa13.47□□□□□ -0.25
LDHA-207ENST00000460405 TJP1Q07157 1748 aa13.47□□□□□ -0.25
LDHA-207ENST00000460405 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
LDHA-207ENST00000460405 DCTN1Q14203 1278 aa13.46□□□□□ -0.25
LDHA-207ENST00000460405 USP16Q9Y5T5 823 aa13.46□□□□□ -0.25
LDHA-207ENST00000460405 H0YIN7 160 aa13.45□□□□□ -0.26
LDHA-207ENST00000460405 RALBP1Q15311 655 aa13.44□□□□□ -0.26
LDHA-207ENST00000460405 C9orf131Q5VYM1 1079 aa13.44□□□□□ -0.26
LDHA-207ENST00000460405 TBC1D9BQ66K14 1250 aa13.44□□□□□ -0.26
LDHA-207ENST00000460405 SETDB2Q96T68 719 aa13.44□□□□□ -0.26
LDHA-207ENST00000460405 NPHP1O15259 732 aa13.43□□□□□ -0.26
LDHA-207ENST00000460405 DZIP3Q86Y13 1208 aaKnown RBP13.43□□□□□ -0.26
LDHA-207ENST00000460405 C2CD5Q86YS7 1000 aa13.43□□□□□ -0.26
LDHA-207ENST00000460405 TTLL6Q8N841 843 aa13.43□□□□□ -0.26
LDHA-207ENST00000460405 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
LDHA-207ENST00000460405 PDZRN3Q9UPQ7 1066 aa13.43□□□□□ -0.26
LDHA-207ENST00000460405 KIF13BQ9NQT8 1826 aa13.43□□□□□ -0.26
LDHA-207ENST00000460405 CAMTA2O94983 1202 aa13.42□□□□□ -0.26
LDHA-207ENST00000460405 PDE6BP35913 854 aa13.42□□□□□ -0.26
LDHA-207ENST00000460405 NFE2L2Q16236 605 aa13.42□□□□□ -0.26
LDHA-207ENST00000460405 CLEC4GQ6UXB4 293 aa13.42□□□□□ -0.26
LDHA-207ENST00000460405 PLEKHF1Q96S99 279 aa13.42□□□□□ -0.26
LDHA-207ENST00000460405 BRIP1Q9BX63 1249 aa13.42□□□□□ -0.26
LDHA-207ENST00000460405 MIS18AQ9NYP9 233 aa13.42□□□□□ -0.26
LDHA-207ENST00000460405 MAPK8IP3Q9UPT6 1336 aa13.41□□□□□ -0.26
LDHA-207ENST00000460405 N4BP2Q86UW6 1770 aaPredicted RBP13.41□□□□□ -0.26
LDHA-207ENST00000460405 PRAMEF22A3QJZ6 481 aa13.41□□□□□ -0.26
LDHA-207ENST00000460405 DDX10Q13206 875 aaKnown RBP13.41□□□□□ -0.26
LDHA-207ENST00000460405 ZNF652Q9Y2D9 606 aa13.41□□□□□ -0.26
LDHA-207ENST00000460405 CARMIL3Q8ND23 1372 aa13.41□□□□□ -0.26
LDHA-207ENST00000460405 KIF3CO14782 793 aa13.4□□□□□ -0.26
LDHA-207ENST00000460405 PIP4K2AP48426 406 aaPredicted RBP13.4□□□□□ -0.26
LDHA-207ENST00000460405 PRR5LQ6MZQ0 368 aa13.4□□□□□ -0.26
LDHA-207ENST00000460405 CNBD1Q8NA66 436 aa13.4□□□□□ -0.26
LDHA-207ENST00000460405 ZNF622Q969S3 477 aaKnown RBP eCLIP13.4□□□□□ -0.26
LDHA-207ENST00000460405 RNF181Q9P0P0 153 aa13.4□□□□□ -0.26
LDHA-207ENST00000460405 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
LDHA-207ENST00000460405 ST5P78524 1137 aa13.39□□□□□ -0.27
LDHA-207ENST00000460405 KIAA1551Q9HCM1 1747 aa13.39□□□□□ -0.27
LDHA-207ENST00000460405 NBPF26B4DH59 902 aa13.38□□□□□ -0.27
LDHA-207ENST00000460405 TOMM70O94826 608 aa13.38□□□□□ -0.27
LDHA-207ENST00000460405 NBPF10Q6P3W6 841 aaKnown RBP13.38□□□□□ -0.27
LDHA-207ENST00000460405 NBPF5PQ86XG9 351 aaPredicted RBP13.38□□□□□ -0.27
LDHA-207ENST00000460405 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
LDHA-207ENST00000460405 NBPF15Q8N660 670 aa13.38□□□□□ -0.27
LDHA-207ENST00000460405 KDM2BQ8NHM5 1336 aa13.38□□□□□ -0.27
LDHA-207ENST00000460405 RGL2O15211 777 aa13.37□□□□□ -0.27
LDHA-207ENST00000460405 HSPA6P17066 643 aa13.37□□□□□ -0.27
LDHA-207ENST00000460405 LMNB1P20700 586 aa13.37□□□□□ -0.27
LDHA-207ENST00000460405 EIF4A1P60842 406 aaKnown RBP13.37□□□□□ -0.27
LDHA-207ENST00000460405 TPTE2Q6XPS3 522 aa13.37□□□□□ -0.27
LDHA-207ENST00000460405 NMRK2Q9NPI5 230 aa13.37□□□□□ -0.27
LDHA-207ENST00000460405 VIRMAQ69YN4 1812 aaKnown RBP13.36□□□□□ -0.27
LDHA-207ENST00000460405 RIPK4P57078 832 aa13.36□□□□□ -0.27
LDHA-207ENST00000460405 C16orf71Q8IYS4 520 aaPredicted RBP13.36□□□□□ -0.27
LDHA-207ENST00000460405 CNKSR1Q969H4 720 aa13.36□□□□□ -0.27
LDHA-207ENST00000460405 THUMPD2Q9BTF0 503 aaKnown RBP13.36□□□□□ -0.27
LDHA-207ENST00000460405 NIP7Q9Y221 180 aaKnown RBP eCLIP13.36□□□□□ -0.27
LDHA-207ENST00000460405 SIPA1L3O60292 1781 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms