RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 APBB1O00213 710 aa12.28□□□□□ -0.44
EPB41-208ENST00000460378 CHAF1AQ13111 956 aaPredicted RBP12.28□□□□□ -0.44
EPB41-208ENST00000460378 ITPRIPQ8IWB1 547 aa12.28□□□□□ -0.44
EPB41-208ENST00000460378 IFIT1P09914 478 aaKnown RBP12.27□□□□□ -0.44
EPB41-208ENST00000460378 HOOK2Q96ED9 719 aa12.27□□□□□ -0.44
EPB41-208ENST00000460378 SPATA31E1Q6ZUB1 1445 aa12.27□□□□□ -0.44
EPB41-208ENST00000460378 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.44
EPB41-208ENST00000460378 MYD88Q99836 296 aa12.27□□□□□ -0.44
EPB41-208ENST00000460378 IFIT5Q13325 482 aaKnown RBP12.27□□□□□ -0.45
EPB41-208ENST00000460378 MPNDQ8N594 471 aa12.27□□□□□ -0.45
EPB41-208ENST00000460378 MIS18AQ9NYP9 233 aa12.27□□□□□ -0.45
EPB41-208ENST00000460378 TECPR2O15040 1411 aa12.27□□□□□ -0.45
EPB41-208ENST00000460378 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
EPB41-208ENST00000460378 CWC25Q9NXE8 425 aaPredicted RBP12.26□□□□□ -0.45
EPB41-208ENST00000460378 ASAP1Q9ULH1 1129 aa12.26□□□□□ -0.45
EPB41-208ENST00000460378 RIMBP2O15034 1052 aa12.26□□□□□ -0.45
EPB41-208ENST00000460378 CD2APQ9Y5K6 639 aa12.26□□□□□ -0.45
EPB41-208ENST00000460378 MAP3K5Q99683 1374 aa12.26□□□□□ -0.45
EPB41-208ENST00000460378 UBTFL1P0CB47 393 aaPredicted RBP12.26□□□□□ -0.45
EPB41-208ENST00000460378 UNC13BO14795 1591 aa12.26□□□□□ -0.45
EPB41-208ENST00000460378 WASHC4Q2M389 1173 aa12.25□□□□□ -0.45
EPB41-208ENST00000460378 DEPDC5O75140 1603 aa12.25□□□□□ -0.45
EPB41-208ENST00000460378 CAPN15O75808 1086 aa12.25□□□□□ -0.45
EPB41-208ENST00000460378 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
EPB41-208ENST00000460378 CPSF1Q10570 1443 aaKnown RBP12.25□□□□□ -0.45
EPB41-208ENST00000460378 KIF24Q5T7B8 1368 aa12.25□□□□□ -0.45
EPB41-208ENST00000460378 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
EPB41-208ENST00000460378 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
EPB41-208ENST00000460378 SRCIN1Q9C0H9 1055 aa12.24□□□□□ -0.45
EPB41-208ENST00000460378 HSP90AB4PQ58FF6 505 aa12.24□□□□□ -0.45
EPB41-208ENST00000460378 CEP126Q9P2H0 1117 aa12.24□□□□□ -0.45
EPB41-208ENST00000460378 ZNF804AQ7Z570 1209 aa12.24□□□□□ -0.45
EPB41-208ENST00000460378 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
EPB41-208ENST00000460378 VEZTQ9HBM0 779 aa12.24□□□□□ -0.45
EPB41-208ENST00000460378 IGSF1Q8N6C5 1336 aa12.24□□□□□ -0.45
EPB41-208ENST00000460378 ECE1P42892 770 aa12.24□□□□□ -0.45
EPB41-208ENST00000460378 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
EPB41-208ENST00000460378 FKBP8Q14318 412 aa12.23□□□□□ -0.45
EPB41-208ENST00000460378 PIGBQ92521 554 aa12.23□□□□□ -0.45
EPB41-208ENST00000460378 ANKRD2Q9GZV1 360 aa12.23□□□□□ -0.45
EPB41-208ENST00000460378 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
EPB41-208ENST00000460378 C2orf69Q8N8R5 385 aa12.23□□□□□ -0.45
EPB41-208ENST00000460378 DCTN1Q14203 1278 aa12.23□□□□□ -0.45
EPB41-208ENST00000460378 METTL24Q5JXM2 366 aa12.23□□□□□ -0.45
EPB41-208ENST00000460378 MASTLQ96GX5 879 aa12.23□□□□□ -0.45
EPB41-208ENST00000460378 TGFB2P61812 414 aa12.23□□□□□ -0.45
EPB41-208ENST00000460378 DUSP27Q5VZP5 1158 aa12.23□□□□□ -0.45
EPB41-208ENST00000460378 SPHKAPQ2M3C7 1700 aa12.22□□□□□ -0.45
EPB41-208ENST00000460378 E9PSI1 815 aa12.22□□□□□ -0.45
EPB41-208ENST00000460378 NPR1P16066 1061 aa12.22□□□□□ -0.45
EPB41-208ENST00000460378 WDR78Q5VTH9 848 aa12.22□□□□□ -0.45
EPB41-208ENST00000460378 ATF7IPQ6VMQ6 1270 aa12.22□□□□□ -0.45
EPB41-208ENST00000460378 GGA1Q9UJY5 639 aa12.22□□□□□ -0.45
EPB41-208ENST00000460378 IKQ13123 557 aaPredicted RBP12.22□□□□□ -0.45
EPB41-208ENST00000460378 ZNF428Q96B54 188 aa12.22□□□□□ -0.45
EPB41-208ENST00000460378 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
EPB41-208ENST00000460378 CCDC158Q5M9N0 1113 aa12.22□□□□□ -0.45
EPB41-208ENST00000460378 TMC4Q7Z404 712 aa12.22□□□□□ -0.45
EPB41-208ENST00000460378 CRACR2BQ8N4Y2 399 aaPredicted RBP12.22□□□□□ -0.45
EPB41-208ENST00000460378 SH3TC1Q8TE82 1336 aa12.21□□□□□ -0.45
EPB41-208ENST00000460378 NEURL4Q96JN8 1562 aa12.21□□□□□ -0.45
EPB41-208ENST00000460378 CLTCL1P53675 1640 aa12.21□□□□□ -0.45
EPB41-208ENST00000460378 CCDC24Q8N4L8 307 aa12.21□□□□□ -0.45
EPB41-208ENST00000460378 EIF5BO60841 1220 aaKnown RBP12.21□□□□□ -0.46
EPB41-208ENST00000460378 VEGFAP15692 232 aaPredicted RBP12.21□□□□□ -0.46
EPB41-208ENST00000460378 NAP1L2Q9ULW6 460 aaPredicted RBP12.21□□□□□ -0.46
EPB41-208ENST00000460378 AXIN2Q9Y2T1 843 aa12.21□□□□□ -0.46
EPB41-208ENST00000460378 CPDO75976 1380 aa12.21□□□□□ -0.46
EPB41-208ENST00000460378 NRXN1Q9ULB1 1477 aa12.2□□□□□ -0.46
EPB41-208ENST00000460378 A0A0G2JLW4 131 aa12.2□□□□□ -0.46
EPB41-208ENST00000460378 UFL1O94874 794 aa12.2□□□□□ -0.46
EPB41-208ENST00000460378 LDHCP07864 332 aa12.2□□□□□ -0.46
EPB41-208ENST00000460378 GNAI3P08754 354 aa12.2□□□□□ -0.46
EPB41-208ENST00000460378 IFIT2P09913 472 aaKnown RBP12.2□□□□□ -0.46
EPB41-208ENST00000460378 C9orf131Q5VYM1 1079 aa12.2□□□□□ -0.46
EPB41-208ENST00000460378 IL6STP40189 918 aaPredicted RBP12.2□□□□□ -0.46
EPB41-208ENST00000460378 C21orf2O43822 256 aa12.2□□□□□ -0.46
EPB41-208ENST00000460378 SLC5A1P13866 664 aa12.2□□□□□ -0.46
EPB41-208ENST00000460378 SMC1BQ8NDV3 1235 aa12.2□□□□□ -0.46
EPB41-208ENST00000460378 XAGE3Q8WTP9 111 aa12.2□□□□□ -0.46
EPB41-208ENST00000460378 SYT17Q9BSW7 474 aa12.2□□□□□ -0.46
EPB41-208ENST00000460378 COPS6Q7L5N1 327 aa12.19□□□□□ -0.46
EPB41-208ENST00000460378 DZIP1Q86YF9 867 aaKnown RBP12.19□□□□□ -0.46
EPB41-208ENST00000460378 APPP05067 770 aa12.19□□□□□ -0.46
EPB41-208ENST00000460378 ATP5J2-PTCD1G3V325 749 aa12.19□□□□□ -0.46
EPB41-208ENST00000460378 RAI14Q9P0K7 980 aa12.18□□□□□ -0.46
EPB41-208ENST00000460378 MYCNP04198 464 aaPredicted RBP12.18□□□□□ -0.46
EPB41-208ENST00000460378 A1BGP04217 495 aa12.18□□□□□ -0.46
EPB41-208ENST00000460378 TMPOP42166 694 aaKnown RBP12.18□□□□□ -0.46
EPB41-208ENST00000460378 TTC39AQ5SRH9 613 aa12.18□□□□□ -0.46
EPB41-208ENST00000460378 RC3H1Q5TC82 1133 aaKnown RBP12.18□□□□□ -0.46
EPB41-208ENST00000460378 TCEAL9Q9UHQ7 104 aa12.18□□□□□ -0.46
EPB41-208ENST00000460378 CROCC2H7BZ55 1655 aa12.18□□□□□ -0.46
EPB41-208ENST00000460378 ROBO1Q9Y6N7 1651 aa12.18□□□□□ -0.46
EPB41-208ENST00000460378 IRS4O14654 1257 aaPredicted RBP12.18□□□□□ -0.46
EPB41-208ENST00000460378 SLC3A2P08195 630 aaKnown RBP12.18□□□□□ -0.46
EPB41-208ENST00000460378 LMNB1P20700 586 aa12.18□□□□□ -0.46
EPB41-208ENST00000460378 ANP32AP39687 249 aaKnown RBP12.18□□□□□ -0.46
EPB41-208ENST00000460378 PNMA8AQ86V59 439 aaPredicted RBP12.18□□□□□ -0.46
EPB41-208ENST00000460378 HACL1Q9UJ83 578 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms