RNA–Protein interactions for RNA: ENST00000459931.1

NCDN-206, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 1,041 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-206ENST00000459931 N4BP2Q86UW6 1770 aaPredicted RBP20.98■□□□□ 0.95
NCDN-206ENST00000459931 POLRMTO00411 1230 aaKnown RBP20.98■□□□□ 0.95
NCDN-206ENST00000459931 PRKAR2BP31323 418 aa20.98■□□□□ 0.95
NCDN-206ENST00000459931 ZNF790Q6PG37 636 aa20.98■□□□□ 0.95
NCDN-206ENST00000459931 PHACTR3Q96KR7 559 aa20.98■□□□□ 0.95
NCDN-206ENST00000459931 KIF13BQ9NQT8 1826 aa20.98■□□□□ 0.95
NCDN-206ENST00000459931 DALRD3Q5D0E6 543 aaKnown RBP20.97■□□□□ 0.95
NCDN-206ENST00000459931 ZNF496Q96IT1 587 aaPredicted RBP20.97■□□□□ 0.95
NCDN-206ENST00000459931 COL15A1P39059 1388 aa20.97■□□□□ 0.95
NCDN-206ENST00000459931 KCPQ6ZWJ8 1503 aa20.96■□□□□ 0.95
NCDN-206ENST00000459931 U2AF1L5P0DN76 240 aaPredicted RBP20.96■□□□□ 0.95
NCDN-206ENST00000459931 PPP2R1AP30153 589 aa20.96■□□□□ 0.95
NCDN-206ENST00000459931 U2AF1Q01081 240 aaKnown RBP eCLIP20.96■□□□□ 0.95
NCDN-206ENST00000459931 TEX13AQ9BXU3 409 aaPredicted RBP20.96■□□□□ 0.95
NCDN-206ENST00000459931 NFIXQ14938 502 aa20.95■□□□□ 0.94
NCDN-206ENST00000459931 RSPH6AQ9H0K4 717 aa20.95■□□□□ 0.94
NCDN-206ENST00000459931 CHRNA5P30532 468 aa20.94■□□□□ 0.94
NCDN-206ENST00000459931 ZNF330Q9Y3S2 320 aaPredicted RBP20.94■□□□□ 0.94
NCDN-206ENST00000459931 ADAMTS7Q9UKP4 1686 aa20.93■□□□□ 0.94
NCDN-206ENST00000459931 VIRMAQ69YN4 1812 aaKnown RBP20.93■□□□□ 0.94
NCDN-206ENST00000459931 CEP350Q5VT06 3117 aa20.93■□□□□ 0.94
NCDN-206ENST00000459931 A0A087WZG4 1122 aa20.93■□□□□ 0.94
NCDN-206ENST00000459931 BTBD11A6QL63 1104 aa20.93■□□□□ 0.94
NCDN-206ENST00000459931 NPM2Q86SE8 214 aaKnown RBP20.93■□□□□ 0.94
NCDN-206ENST00000459931 RTF1Q92541 710 aaKnown RBP20.93■□□□□ 0.94
NCDN-206ENST00000459931 FMNL2Q96PY5 1086 aa20.93■□□□□ 0.94
NCDN-206ENST00000459931 KIAA1551Q9HCM1 1747 aa20.92■□□□□ 0.94
NCDN-206ENST00000459931 SERPINB2P05120 415 aa20.92■□□□□ 0.94
NCDN-206ENST00000459931 EIF5P55010 431 aaKnown RBP20.92■□□□□ 0.94
NCDN-206ENST00000459931 BCL2L12Q9HB09 334 aa20.92■□□□□ 0.94
NCDN-206ENST00000459931 HEG1Q9ULI3 1381 aa20.92■□□□□ 0.94
NCDN-206ENST00000459931 BICDL1Q6ZP65 573 aa20.91■□□□□ 0.94
NCDN-206ENST00000459931 CEMIPQ8WUJ3 1361 aa20.89■□□□□ 0.93
NCDN-206ENST00000459931 C9orf131Q5VYM1 1079 aa20.89■□□□□ 0.93
NCDN-206ENST00000459931 TBC1D2BQ9UPU7 963 aa20.89■□□□□ 0.93
NCDN-206ENST00000459931 KCNQ3O43525 872 aa20.88■□□□□ 0.93
NCDN-206ENST00000459931 MCM10Q7L590 875 aa20.88■□□□□ 0.93
NCDN-206ENST00000459931 KIF3CO14782 793 aa20.87■□□□□ 0.93
NCDN-206ENST00000459931 A1BGP04217 495 aa20.87■□□□□ 0.93
NCDN-206ENST00000459931 IL6STP40189 918 aaPredicted RBP20.87■□□□□ 0.93
NCDN-206ENST00000459931 UBR2Q8IWV8 1755 aa20.87■□□□□ 0.93
NCDN-206ENST00000459931 H0YIN7 160 aa20.86■□□□□ 0.93
NCDN-206ENST00000459931 ZEB1P37275 1124 aaPredicted RBP20.86■□□□□ 0.93
NCDN-206ENST00000459931 NEFMP07197 916 aa20.85■□□□□ 0.93
NCDN-206ENST00000459931 TBC1D9BQ66K14 1250 aa20.85■□□□□ 0.93
NCDN-206ENST00000459931 C2CD5Q86YS7 1000 aa20.85■□□□□ 0.93
NCDN-206ENST00000459931 BRCA1P38398 1863 aaKnown RBP20.84■□□□□ 0.93
NCDN-206ENST00000459931 HSPA6P17066 643 aa20.84■□□□□ 0.93
NCDN-206ENST00000459931 DCTN1Q14203 1278 aa20.84■□□□□ 0.93
NCDN-206ENST00000459931 RNF181Q9P0P0 153 aa20.84■□□□□ 0.93
NCDN-206ENST00000459931 USP16Q9Y5T5 823 aa20.84■□□□□ 0.93
NCDN-206ENST00000459931 HTATSF1O43719 755 aaKnown RBP20.83■□□□□ 0.93
NCDN-206ENST00000459931 TTLL6Q8N841 843 aa20.83■□□□□ 0.93
NCDN-206ENST00000459931 SETDB2Q96T68 719 aa20.83■□□□□ 0.93
NCDN-206ENST00000459931 NPHP1O15259 732 aa20.82■□□□□ 0.92
NCDN-206ENST00000459931 TOMM70O94826 608 aa20.82■□□□□ 0.92
NCDN-206ENST00000459931 SNRPA1P09661 255 aaKnown RBP20.82■□□□□ 0.92
NCDN-206ENST00000459931 NMRK2Q9NPI5 230 aa20.82■□□□□ 0.92
NCDN-206ENST00000459931 ARFGEF1Q9Y6D6 1849 aa20.81■□□□□ 0.92
NCDN-206ENST00000459931 SIPA1L3O60292 1781 aaPredicted RBP20.81■□□□□ 0.92
NCDN-206ENST00000459931 PRAMEF22A3QJZ6 481 aa20.8■□□□□ 0.92
NCDN-206ENST00000459931 PDE6BP35913 854 aa20.8■□□□□ 0.92
NCDN-206ENST00000459931 PIP4K2AP48426 406 aaPredicted RBP20.8■□□□□ 0.92
NCDN-206ENST00000459931 TAF7Q15545 349 aaPredicted RBP20.8■□□□□ 0.92
NCDN-206ENST00000459931 DZIP3Q86Y13 1208 aaKnown RBP20.8■□□□□ 0.92
NCDN-206ENST00000459931 CCDC24Q8N4L8 307 aa20.8■□□□□ 0.92
NCDN-206ENST00000459931 ZNF622Q969S3 477 aaKnown RBP eCLIP20.8■□□□□ 0.92
NCDN-206ENST00000459931 BRIP1Q9BX63 1249 aa20.8■□□□□ 0.92
NCDN-206ENST00000459931 AFDNP55196 1824 aaKnown RBP20.8■□□□□ 0.92
NCDN-206ENST00000459931 CAMTA2O94983 1202 aa20.79■□□□□ 0.92
NCDN-206ENST00000459931 C16orf71Q8IYS4 520 aaPredicted RBP20.79■□□□□ 0.92
NCDN-206ENST00000459931 CARMIL3Q8ND23 1372 aa20.79■□□□□ 0.92
NCDN-206ENST00000459931 KDM2BQ8NHM5 1336 aa20.78■□□□□ 0.92
NCDN-206ENST00000459931 RASSF7Q02833 373 aa20.78■□□□□ 0.92
NCDN-206ENST00000459931 PRR5LQ6MZQ0 368 aa20.78■□□□□ 0.92
NCDN-206ENST00000459931 MIS18AQ9NYP9 233 aa20.78■□□□□ 0.92
NCDN-206ENST00000459931 PDZRN3Q9UPQ7 1066 aa20.78■□□□□ 0.92
NCDN-206ENST00000459931 CNBD1Q8NA66 436 aa20.77■□□□□ 0.92
NCDN-206ENST00000459931 NRXN2Q9P2S2 1712 aa20.77■□□□□ 0.92
NCDN-206ENST00000459931 LMNB1P20700 586 aa20.76■□□□□ 0.91
NCDN-206ENST00000459931 PNNQ9H307 717 aaKnown RBP20.76■□□□□ 0.91
NCDN-206ENST00000459931 ST5P78524 1137 aa20.75■□□□□ 0.91
NCDN-206ENST00000459931 CLEC4GQ6UXB4 293 aa20.75■□□□□ 0.91
NCDN-206ENST00000459931 RRAGCQ9HB90 399 aa20.75■□□□□ 0.91
NCDN-206ENST00000459931 ZNF652Q9Y2D9 606 aa20.75■□□□□ 0.91
NCDN-206ENST00000459931 DDX10Q13206 875 aaKnown RBP20.74■□□□□ 0.91
NCDN-206ENST00000459931 ZNF219Q9P2Y4 722 aaPredicted RBP20.74■□□□□ 0.91
NCDN-206ENST00000459931 NBPF5PQ86XG9 351 aaPredicted RBP20.73■□□□□ 0.91
NCDN-206ENST00000459931 PNISRQ8TF01 805 aaKnown RBP20.73■□□□□ 0.91
NCDN-206ENST00000459931 PLEKHF1Q96S99 279 aa20.73■□□□□ 0.91
NCDN-206ENST00000459931 NBPF26B4DH59 902 aa20.72■□□□□ 0.91
NCDN-206ENST00000459931 C21orf2O43822 256 aa20.72■□□□□ 0.91
NCDN-206ENST00000459931 APLP1P51693 650 aa20.72■□□□□ 0.91
NCDN-206ENST00000459931 NFE2L2Q16236 605 aa20.72■□□□□ 0.91
NCDN-206ENST00000459931 NBPF10Q6P3W6 841 aaKnown RBP20.72■□□□□ 0.91
NCDN-206ENST00000459931 NBPF15Q8N660 670 aa20.72■□□□□ 0.91
NCDN-206ENST00000459931 RBM46Q8TBY0 533 aaKnown RBP20.72■□□□□ 0.91
NCDN-206ENST00000459931 MAPK8IP3Q9UPT6 1336 aa20.72■□□□□ 0.91
NCDN-206ENST00000459931 CNKSR1Q969H4 720 aa20.71■□□□□ 0.91
NCDN-206ENST00000459931 ZC3H4Q9UPT8 1303 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms