RNA–Protein interactions for RNA: ENST00000459809.5

PHF1-206, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-206ENST00000459809 MCM10Q7L590 875 aa17.36■□□□□ 0.37
PHF1-206ENST00000459809 TAF7Q15545 349 aaPredicted RBP17.35■□□□□ 0.37
PHF1-206ENST00000459809 PLEKHF1Q96S99 279 aa17.35■□□□□ 0.37
PHF1-206ENST00000459809 A0A0G2JLW4 131 aa17.34■□□□□ 0.37
PHF1-206ENST00000459809 IL6STP40189 918 aaPredicted RBP17.34■□□□□ 0.37
PHF1-206ENST00000459809 NPM2Q86SE8 214 aaKnown RBP17.34■□□□□ 0.37
PHF1-206ENST00000459809 COL15A1P39059 1388 aa17.33■□□□□ 0.36
PHF1-206ENST00000459809 POLRMTO00411 1230 aaKnown RBP17.33■□□□□ 0.36
PHF1-206ENST00000459809 SNRPA1P09661 255 aaKnown RBP17.33■□□□□ 0.36
PHF1-206ENST00000459809 PNISRQ8TF01 805 aaKnown RBP17.33■□□□□ 0.36
PHF1-206ENST00000459809 MYH14Q7Z406 1995 aaKnown RBP17.33■□□□□ 0.36
PHF1-206ENST00000459809 TJP1Q07157 1748 aa17.33■□□□□ 0.36
PHF1-206ENST00000459809 KCNQ3O43525 872 aa17.32■□□□□ 0.36
PHF1-206ENST00000459809 DDR1Q08345 913 aa17.32■□□□□ 0.36
PHF1-206ENST00000459809 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
PHF1-206ENST00000459809 C10orf71Q711Q0 1435 aa17.31■□□□□ 0.36
PHF1-206ENST00000459809 DPEP1P16444 411 aa17.31■□□□□ 0.36
PHF1-206ENST00000459809 DCTN1Q14203 1278 aa17.31■□□□□ 0.36
PHF1-206ENST00000459809 NFIXQ14938 502 aa17.31■□□□□ 0.36
PHF1-206ENST00000459809 MAPK8IP3Q9UPT6 1336 aa17.3■□□□□ 0.36
PHF1-206ENST00000459809 ZEB1P37275 1124 aaPredicted RBP17.3■□□□□ 0.36
PHF1-206ENST00000459809 BCL2L12Q9HB09 334 aa17.3■□□□□ 0.36
PHF1-206ENST00000459809 PIM2Q9P1W9 311 aa17.3■□□□□ 0.36
PHF1-206ENST00000459809 USP16Q9Y5T5 823 aa17.3■□□□□ 0.36
PHF1-206ENST00000459809 MYBBP1AQ9BQG0 1328 aaKnown RBP17.29■□□□□ 0.36
PHF1-206ENST00000459809 A1BGP04217 495 aa17.29■□□□□ 0.36
PHF1-206ENST00000459809 KCNA3P22001 575 aa17.29■□□□□ 0.36
PHF1-206ENST00000459809 BCS1LQ9Y276 419 aa17.29■□□□□ 0.36
PHF1-206ENST00000459809 PXDNLA1KZ92 1463 aa17.29■□□□□ 0.36
PHF1-206ENST00000459809 SERPINB2P05120 415 aa17.28■□□□□ 0.36
PHF1-206ENST00000459809 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
PHF1-206ENST00000459809 C4AP0C0L4 1744 aa17.27■□□□□ 0.36
PHF1-206ENST00000459809 TBC1D2BQ9UPU7 963 aa17.27■□□□□ 0.36
PHF1-206ENST00000459809 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
PHF1-206ENST00000459809 CHD4Q14839 1912 aa17.26■□□□□ 0.35
PHF1-206ENST00000459809 DALRD3Q5D0E6 543 aaKnown RBP17.26■□□□□ 0.35
PHF1-206ENST00000459809 ZNF330Q9Y3S2 320 aaPredicted RBP17.26■□□□□ 0.35
PHF1-206ENST00000459809 RGL2O15211 777 aa17.25■□□□□ 0.35
PHF1-206ENST00000459809 CLEC4GQ6UXB4 293 aa17.25■□□□□ 0.35
PHF1-206ENST00000459809 ARHGAP27Q6ZUM4 889 aa17.25■□□□□ 0.35
PHF1-206ENST00000459809 MIS18AQ9NYP9 233 aa17.25■□□□□ 0.35
PHF1-206ENST00000459809 PDZRN3Q9UPQ7 1066 aa17.25■□□□□ 0.35
PHF1-206ENST00000459809 RIPK4P57078 832 aa17.24■□□□□ 0.35
PHF1-206ENST00000459809 LMOD3Q0VAK6 560 aa17.24■□□□□ 0.35
PHF1-206ENST00000459809 BICDL1Q6ZP65 573 aa17.24■□□□□ 0.35
PHF1-206ENST00000459809 DZIP3Q86Y13 1208 aaKnown RBP17.24■□□□□ 0.35
PHF1-206ENST00000459809 SETDB2Q96T68 719 aa17.24■□□□□ 0.35
PHF1-206ENST00000459809 BABAM1Q9NWV8 329 aa17.24■□□□□ 0.35
PHF1-206ENST00000459809 UTRNP46939 3433 aa17.24■□□□□ 0.35
PHF1-206ENST00000459809 SIPA1L3O60292 1781 aaPredicted RBP17.23■□□□□ 0.35
PHF1-206ENST00000459809 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
PHF1-206ENST00000459809 CAMTA2O94983 1202 aa17.23■□□□□ 0.35
PHF1-206ENST00000459809 TBC1D9BQ66K14 1250 aa17.23■□□□□ 0.35
PHF1-206ENST00000459809 KIF13BQ9NQT8 1826 aa17.22■□□□□ 0.35
PHF1-206ENST00000459809 GIGYF1O75420 1035 aaPredicted RBP17.22■□□□□ 0.35
PHF1-206ENST00000459809 CHRNA5P30532 468 aa17.22■□□□□ 0.35
PHF1-206ENST00000459809 TMPOP42166 694 aaKnown RBP17.22■□□□□ 0.35
PHF1-206ENST00000459809 EIF4A1P60842 406 aaKnown RBP17.22■□□□□ 0.35
PHF1-206ENST00000459809 WDR43Q15061 677 aaKnown RBP eCLIP17.22■□□□□ 0.35
PHF1-206ENST00000459809 BRIP1Q9BX63 1249 aa17.22■□□□□ 0.35
PHF1-206ENST00000459809 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
PHF1-206ENST00000459809 ZNF652Q9Y2D9 606 aa17.22■□□□□ 0.35
PHF1-206ENST00000459809 H0YIN7 160 aa17.21■□□□□ 0.35
PHF1-206ENST00000459809 PDE6BP35913 854 aa17.21■□□□□ 0.35
PHF1-206ENST00000459809 C1QTNF8P60827 252 aa17.21■□□□□ 0.35
PHF1-206ENST00000459809 RUNDC1Q96C34 613 aa17.21■□□□□ 0.35
PHF1-206ENST00000459809 VIRMAQ69YN4 1812 aaKnown RBP17.21■□□□□ 0.35
PHF1-206ENST00000459809 CARMIL3Q8ND23 1372 aa17.2■□□□□ 0.34
PHF1-206ENST00000459809 NBPF26B4DH59 902 aa17.2■□□□□ 0.34
PHF1-206ENST00000459809 NBPF10Q6P3W6 841 aaKnown RBP17.2■□□□□ 0.34
PHF1-206ENST00000459809 NBPF15Q8N660 670 aa17.2■□□□□ 0.34
PHF1-206ENST00000459809 THUMPD2Q9BTF0 503 aaKnown RBP17.2■□□□□ 0.34
PHF1-206ENST00000459809 GPBP1L1Q9HC44 474 aaPredicted RBP17.2■□□□□ 0.34
PHF1-206ENST00000459809 ADCY9O60503 1353 aa17.19■□□□□ 0.34
PHF1-206ENST00000459809 C2CD5Q86YS7 1000 aa17.19■□□□□ 0.34
PHF1-206ENST00000459809 TTLL6Q8N841 843 aa17.19■□□□□ 0.34
PHF1-206ENST00000459809 ATP10DQ9P241 1426 aa17.19■□□□□ 0.34
PHF1-206ENST00000459809 PIP4K2AP48426 406 aaPredicted RBP17.18■□□□□ 0.34
PHF1-206ENST00000459809 PRR5LQ6MZQ0 368 aa17.18■□□□□ 0.34
PHF1-206ENST00000459809 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
PHF1-206ENST00000459809 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
PHF1-206ENST00000459809 GOLGB1Q14789 3259 aaKnown RBP17.17■□□□□ 0.34
PHF1-206ENST00000459809 NPHP1O15259 732 aa17.17■□□□□ 0.34
PHF1-206ENST00000459809 CNBD1Q8NA66 436 aa17.17■□□□□ 0.34
PHF1-206ENST00000459809 ERVV-1B6SEH8 477 aa17.16■□□□□ 0.34
PHF1-206ENST00000459809 ST5P78524 1137 aa17.16■□□□□ 0.34
PHF1-206ENST00000459809 TPTE2Q6XPS3 522 aa17.16■□□□□ 0.34
PHF1-206ENST00000459809 NBPF5PQ86XG9 351 aaPredicted RBP17.15■□□□□ 0.34
PHF1-206ENST00000459809 KIAA1551Q9HCM1 1747 aa17.15■□□□□ 0.34
PHF1-206ENST00000459809 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
PHF1-206ENST00000459809 NEUROD2Q15784 382 aa17.14■□□□□ 0.33
PHF1-206ENST00000459809 C9orf131Q5VYM1 1079 aa17.14■□□□□ 0.33
PHF1-206ENST00000459809 CCDC146Q8IYE0 955 aa17.14■□□□□ 0.33
PHF1-206ENST00000459809 NIP7Q9Y221 180 aaKnown RBP eCLIP17.14■□□□□ 0.33
PHF1-206ENST00000459809 RRP7AQ9Y3A4 280 aaKnown RBP17.14■□□□□ 0.33
PHF1-206ENST00000459809 N4BP2Q86UW6 1770 aaPredicted RBP17.14■□□□□ 0.33
PHF1-206ENST00000459809 CHL1O00533 1208 aa17.13■□□□□ 0.33
PHF1-206ENST00000459809 CNKSR1Q969H4 720 aa17.13■□□□□ 0.33
PHF1-206ENST00000459809 ZNF622Q969S3 477 aaKnown RBP eCLIP17.13■□□□□ 0.332e-7■□□□□ 9.4
PHF1-206ENST00000459809 STYK1Q6J9G0 422 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms