RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 RANBP2P49792 3224 aaKnown RBP5.84□□□□□ -1.47
RGPD6-206ENST00000459645 PITPNM2Q9BZ72 1349 aa5.84□□□□□ -1.47
RGPD6-206ENST00000459645 LOC102724428A0A0B4J2F2 783 aa5.84□□□□□ -1.47
RGPD6-206ENST00000459645 HMGB2P26583 209 aaKnown RBP5.84□□□□□ -1.47
RGPD6-206ENST00000459645 SIK1P57059 783 aa5.84□□□□□ -1.47
RGPD6-206ENST00000459645 RBM10P98175 930 aaKnown RBP5.84□□□□□ -1.47
RGPD6-206ENST00000459645 NBPF1Q3BBV0 1214 aa5.84□□□□□ -1.47
RGPD6-206ENST00000459645 ERFEQ4G0M1 354 aa5.84□□□□□ -1.47
RGPD6-206ENST00000459645 CNTROBQ8N137 903 aa5.84□□□□□ -1.47
RGPD6-206ENST00000459645 PIGBQ92521 554 aa5.84□□□□□ -1.47
RGPD6-206ENST00000459645 ARHGEF1Q92888 912 aaKnown RBP5.84□□□□□ -1.47
RGPD6-206ENST00000459645 SMARCC1Q92922 1105 aaPredicted RBP5.84□□□□□ -1.47
RGPD6-206ENST00000459645 C4AP0C0L4 1744 aa5.84□□□□□ -1.47
RGPD6-206ENST00000459645 THSD7BQ9C0I4 1608 aa5.84□□□□□ -1.47
RGPD6-206ENST00000459645 TAF1LQ8IZX4 1826 aa5.83□□□□□ -1.48
RGPD6-206ENST00000459645 CA12O43570 354 aa5.83□□□□□ -1.48
RGPD6-206ENST00000459645 ECE1P42892 770 aa5.83□□□□□ -1.48
RGPD6-206ENST00000459645 NEUROD1Q13562 356 aa5.83□□□□□ -1.48
RGPD6-206ENST00000459645 TRAPPC3LQ5T215 181 aa5.83□□□□□ -1.48
RGPD6-206ENST00000459645 TEX2Q8IWB9 1127 aa5.83□□□□□ -1.48
RGPD6-206ENST00000459645 DDX21Q9NR30 783 aaKnown RBP eCLIP5.83□□□□□ -1.48
RGPD6-206ENST00000459645 CLEC11AQ9Y240 323 aa5.83□□□□□ -1.48
RGPD6-206ENST00000459645 SALL2Q9Y467 1007 aaPredicted RBP5.83□□□□□ -1.48
RGPD6-206ENST00000459645 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.83□□□□□ -1.48
RGPD6-206ENST00000459645 TIAM2Q8IVF5 1701 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 CASP8AP2Q9UKL3 1982 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 TTC21AQ8NDW8 1320 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 IQCA1LA6NCM1 817 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 CHRM1P11229 460 aaPredicted RBP5.82□□□□□ -1.48
RGPD6-206ENST00000459645 MAP2K2P36507 400 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 FKBP8Q14318 412 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 CST9Q5W186 159 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 CIAPIN1Q6FI81 312 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 L3MBTL3Q96JM7 780 aaPredicted RBP5.82□□□□□ -1.48
RGPD6-206ENST00000459645 ZIC5Q96T25 663 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 PSMD1Q99460 953 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 MPHOSPH9Q99550 1183 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 ZMYND15Q9H091 742 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 SRP68Q9UHB9 627 aaKnown RBP5.82□□□□□ -1.48
RGPD6-206ENST00000459645 ASAP1Q9ULH1 1129 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 RTCBQ9Y3I0 505 aaKnown RBP5.82□□□□□ -1.48
RGPD6-206ENST00000459645 CEP290O15078 2479 aa5.82□□□□□ -1.48
RGPD6-206ENST00000459645 PTMAP06454 111 aaKnown RBP5.81□□□□□ -1.48
RGPD6-206ENST00000459645 RFC4P35249 363 aa5.81□□□□□ -1.48
RGPD6-206ENST00000459645 ATP6V1AP38606 617 aa5.81□□□□□ -1.48
RGPD6-206ENST00000459645 NME9Q86XW9 330 aa5.81□□□□□ -1.48
RGPD6-206ENST00000459645 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.81□□□□□ -1.48
RGPD6-206ENST00000459645 USHBP1Q8N6Y0 703 aa5.81□□□□□ -1.48
RGPD6-206ENST00000459645 TTLL6Q8N841 843 aa5.81□□□□□ -1.48
RGPD6-206ENST00000459645 DCAF11Q8TEB1 546 aa5.81□□□□□ -1.48
RGPD6-206ENST00000459645 ADAMTS7Q9UKP4 1686 aa5.8□□□□□ -1.48
RGPD6-206ENST00000459645 POLRMTO00411 1230 aaKnown RBP5.8□□□□□ -1.48
RGPD6-206ENST00000459645 TRAF5O00463 557 aa5.8□□□□□ -1.48
RGPD6-206ENST00000459645 CYP27B1O15528 508 aa5.8□□□□□ -1.48
RGPD6-206ENST00000459645 MCCP23508 829 aa5.8□□□□□ -1.48
RGPD6-206ENST00000459645 BRPF1P55201 1214 aaPredicted RBP5.8□□□□□ -1.48
RGPD6-206ENST00000459645 IPO4Q8TEX9 1081 aaKnown RBP5.8□□□□□ -1.48
RGPD6-206ENST00000459645 IP6K1Q92551 441 aa5.8□□□□□ -1.48
RGPD6-206ENST00000459645 SLC4A9Q96Q91 983 aa5.8□□□□□ -1.48
RGPD6-206ENST00000459645 HPS5Q9UPZ3 1129 aa5.8□□□□□ -1.48
RGPD6-206ENST00000459645 COLQQ9Y215 455 aaPredicted RBP5.8□□□□□ -1.48
RGPD6-206ENST00000459645 TLL2Q9Y6L7 1015 aa5.8□□□□□ -1.48
RGPD6-206ENST00000459645 USP31Q70CQ4 1352 aa5.8□□□□□ -1.48
RGPD6-206ENST00000459645 ZNF541Q9H0D2 1346 aa5.79□□□□□ -1.48
RGPD6-206ENST00000459645 C21orf2O43822 256 aa5.79□□□□□ -1.48
RGPD6-206ENST00000459645 ADRA2BP18089 450 aa5.79□□□□□ -1.48
RGPD6-206ENST00000459645 EPHX2P34913 555 aa5.79□□□□□ -1.48
RGPD6-206ENST00000459645 NBPF6Q5VWK0 638 aa5.79□□□□□ -1.48
RGPD6-206ENST00000459645 CC2D2BQ6DHV5 1058 aa5.79□□□□□ -1.48
RGPD6-206ENST00000459645 CCER1Q8TC90 406 aaPredicted RBP5.79□□□□□ -1.48
RGPD6-206ENST00000459645 NBPF4Q96M43 638 aa5.79□□□□□ -1.48
RGPD6-206ENST00000459645 HACL1Q9UJ83 578 aa5.79□□□□□ -1.48
RGPD6-206ENST00000459645 BRCA2P51587 3418 aa5.79□□□□□ -1.48
RGPD6-206ENST00000459645 FAM208AQ9UK61 1670 aaKnown RBP5.79□□□□□ -1.48
RGPD6-206ENST00000459645 UNC80Q8N2C7 3258 aa5.78□□□□□ -1.48
RGPD6-206ENST00000459645 RPS6KA4O75676 772 aa5.78□□□□□ -1.48
RGPD6-206ENST00000459645 FBLN1P23142 703 aa5.78□□□□□ -1.48
RGPD6-206ENST00000459645 TM4SF1P30408 202 aa5.78□□□□□ -1.48
RGPD6-206ENST00000459645 PPARGC1BQ86YN6 1023 aaKnown RBP5.78□□□□□ -1.48
RGPD6-206ENST00000459645 C2CD5Q86YS7 1000 aa5.78□□□□□ -1.48
RGPD6-206ENST00000459645 ANP32BQ92688 251 aaKnown RBP5.78□□□□□ -1.48
RGPD6-206ENST00000459645 ZNF692Q9BU19 519 aaPredicted RBP5.78□□□□□ -1.48
RGPD6-206ENST00000459645 ATG3Q9NT62 314 aa5.78□□□□□ -1.48
RGPD6-206ENST00000459645 MAP2P11137 1827 aaKnown RBP5.78□□□□□ -1.48
RGPD6-206ENST00000459645 HTTP42858 3142 aa5.78□□□□□ -1.48
RGPD6-206ENST00000459645 KTN1Q86UP2 1357 aaKnown RBP5.78□□□□□ -1.48
RGPD6-206ENST00000459645 ADAMTSL1Q8N6G6 1762 aa5.78□□□□□ -1.48
RGPD6-206ENST00000459645 CD163L1Q9NR16 1453 aa5.77□□□□□ -1.49
RGPD6-206ENST00000459645 RNF123Q5XPI4 1314 aa5.77□□□□□ -1.49
RGPD6-206ENST00000459645 PCDH11XQ9BZA7 1347 aa5.77□□□□□ -1.49
RGPD6-206ENST00000459645 PCDH11YQ9BZA8 1340 aa5.77□□□□□ -1.49
RGPD6-206ENST00000459645 USP42Q9H9J4 1324 aaKnown RBP5.77□□□□□ -1.49
RGPD6-206ENST00000459645 CENPJQ9HC77 1338 aaPredicted RBP5.77□□□□□ -1.49
RGPD6-206ENST00000459645 DEKP35659 375 aaKnown RBP5.77□□□□□ -1.49
RGPD6-206ENST00000459645 RC3H1Q5TC82 1133 aaKnown RBP5.77□□□□□ -1.49
RGPD6-206ENST00000459645 CTU1Q7Z7A3 348 aaKnown RBP5.77□□□□□ -1.49
RGPD6-206ENST00000459645 SAPCD2Q86UD0 394 aa5.77□□□□□ -1.49
RGPD6-206ENST00000459645 MPNDQ8N594 471 aa5.77□□□□□ -1.49
RGPD6-206ENST00000459645 RAPGEF4Q8WZA2 1011 aa5.77□□□□□ -1.49
RGPD6-206ENST00000459645 TAOK3Q9H2K8 898 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms