RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 NRAPQ86VF7 1730 aa7.35□□□□□ -1.23
RNU1-88P-201ENST00000459274 LRRC37A3O60309 1634 aa7.34□□□□□ -1.23
RNU1-88P-201ENST00000459274 SIPA1L3O60292 1781 aaPredicted RBP7.34□□□□□ -1.23
RNU1-88P-201ENST00000459274 HMMRO75330 724 aa7.34□□□□□ -1.23
RNU1-88P-201ENST00000459274 GIGYF1O75420 1035 aaPredicted RBP7.34□□□□□ -1.23
RNU1-88P-201ENST00000459274 GNAI3P08754 354 aa7.34□□□□□ -1.23
RNU1-88P-201ENST00000459274 FLIIQ13045 1269 aa7.34□□□□□ -1.23
RNU1-88P-201ENST00000459274 SLC39A6Q13433 755 aa7.34□□□□□ -1.23
RNU1-88P-201ENST00000459274 VSIG10Q8N0Z9 540 aa7.34□□□□□ -1.23
RNU1-88P-201ENST00000459274 PIP4P2Q8N4L2 257 aa7.34□□□□□ -1.23
RNU1-88P-201ENST00000459274 EXOC6Q8TAG9 804 aa7.34□□□□□ -1.23
RNU1-88P-201ENST00000459274 TNS2Q63HR2 1409 aa7.34□□□□□ -1.23
RNU1-88P-201ENST00000459274 ERBB4Q15303 1308 aa7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 TRIM27P14373 513 aa7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 MYL6BP14649 208 aa7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 RXRBP28702 533 aa7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 PRIM1P49642 420 aaKnown RBP7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 RBM6P78332 1123 aaKnown RBP7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 AIMP1Q12904 312 aaKnown RBP7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 KIF6Q6ZMV9 814 aa7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 FAM196AQ6ZSG2 479 aa7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 CENPQQ7L2Z9 268 aaPredicted RBP7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 PANK1Q8TE04 598 aa7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 DDX21Q9NR30 783 aaKnown RBP eCLIP7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 C9orf78Q9NZ63 289 aaPredicted RBP7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 ZNF330Q9Y3S2 320 aaPredicted RBP7.33□□□□□ -1.24
RNU1-88P-201ENST00000459274 ATP6V1AP38606 617 aa7.32□□□□□ -1.24
RNU1-88P-201ENST00000459274 B4GALNT3Q6L9W6 998 aa7.32□□□□□ -1.24
RNU1-88P-201ENST00000459274 ACSBG1Q96GR2 724 aa7.32□□□□□ -1.24
RNU1-88P-201ENST00000459274 ZNF496Q96IT1 587 aaPredicted RBP7.32□□□□□ -1.24
RNU1-88P-201ENST00000459274 SRCIN1Q9C0H9 1055 aa7.32□□□□□ -1.24
RNU1-88P-201ENST00000459274 CHPF2Q9P2E5 772 aa7.32□□□□□ -1.24
RNU1-88P-201ENST00000459274 HEG1Q9ULI3 1381 aa7.32□□□□□ -1.24
RNU1-88P-201ENST00000459274 ADAMTS7Q9UKP4 1686 aa7.32□□□□□ -1.24
RNU1-88P-201ENST00000459274 BCL9LQ86UU0 1499 aa7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 LRP6O75581 1613 aa7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 KDM6AO15550 1401 aaPredicted RBP7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 UBTFL1P0CB47 393 aaPredicted RBP7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 HSP90B1P14625 803 aaKnown RBP7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 SF3B2Q13435 895 aaKnown RBP7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 KRT24Q2M2I5 525 aa7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 KSR2Q6VAB6 950 aa7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 ANKRD13DQ6ZTN6 518 aa7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 KRT27Q7Z3Y8 459 aa7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 SEPT12Q8IYM1 358 aa7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 TMEM57Q8N5G2 664 aa7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 DNAAF4Q8WXU2 420 aa7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 PIGBQ92521 554 aa7.31□□□□□ -1.24
RNU1-88P-201ENST00000459274 MRC1P22897 1456 aa7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 DOT1LQ8TEK3 1739 aa7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 DISP2A7MBM2 1401 aa7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 A0A087WZG4 1122 aa7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 KCNQ3O43525 872 aa7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 ALDH1L1O75891 902 aa7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 HSP90AB3PQ58FF7 597 aa7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 C20orf194Q5TEA3 1177 aa7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 INTS3Q68E01 1043 aaKnown RBP7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 RPAP2Q8IXW5 612 aaPredicted RBP7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 LAMB4A4D0S4 1761 aa7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 SHANK3Q9BYB0 1731 aa7.3□□□□□ -1.24
RNU1-88P-201ENST00000459274 PI4KAP2A4QPH2 592 aa7.29□□□□□ -1.24
RNU1-88P-201ENST00000459274 NPHP1O15259 732 aa7.29□□□□□ -1.24
RNU1-88P-201ENST00000459274 GNAI2P04899 355 aa7.29□□□□□ -1.24
RNU1-88P-201ENST00000459274 COPS6Q7L5N1 327 aa7.29□□□□□ -1.24
RNU1-88P-201ENST00000459274 PI4KAP1Q8N8J0 262 aa7.29□□□□□ -1.24
RNU1-88P-201ENST00000459274 MARCH10Q8NA82 808 aaPredicted RBP7.29□□□□□ -1.24
RNU1-88P-201ENST00000459274 ATG3Q9NT62 314 aa7.29□□□□□ -1.24
RNU1-88P-201ENST00000459274 ASAP1Q9ULH1 1129 aa7.29□□□□□ -1.24
RNU1-88P-201ENST00000459274 ZNF652Q9Y2D9 606 aa7.29□□□□□ -1.24
RNU1-88P-201ENST00000459274 MAP3K2Q9Y2U5 619 aa7.29□□□□□ -1.24
RNU1-88P-201ENST00000459274 USP16Q9Y5T5 823 aa7.29□□□□□ -1.24
RNU1-88P-201ENST00000459274 ABCC4O15439 1325 aa7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 BCL9O00512 1426 aa7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 ONECUT3O60422 494 aaPredicted RBP7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 EIF5BO60841 1220 aaKnown RBP7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 HSP90AB4PQ58FF6 505 aa7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 LINS1Q8NG48 757 aa7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 PLBD2Q8NHP8 589 aa7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 XAGE3Q8WTP9 111 aa7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 GCC1Q96CN9 775 aa7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 PHAXQ9H814 394 aaKnown RBP7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 AFDNP55196 1824 aaKnown RBP7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 UBR2Q8IWV8 1755 aa7.28□□□□□ -1.24
RNU1-88P-201ENST00000459274 ATRNO75882 1429 aa7.27□□□□□ -1.24
RNU1-88P-201ENST00000459274 LOC102724428A0A0B4J2F2 783 aa7.27□□□□□ -1.25
RNU1-88P-201ENST00000459274 F6X3S4 739 aa7.27□□□□□ -1.25
RNU1-88P-201ENST00000459274 ZBTB7BO15156 539 aaPredicted RBP7.27□□□□□ -1.25
RNU1-88P-201ENST00000459274 ZPR1O75312 459 aa7.27□□□□□ -1.25
RNU1-88P-201ENST00000459274 CAPN15O75808 1086 aa7.27□□□□□ -1.25
RNU1-88P-201ENST00000459274 SIK1P57059 783 aa7.27□□□□□ -1.25
RNU1-88P-201ENST00000459274 OS9Q13438 667 aaPredicted RBP7.27□□□□□ -1.25
RNU1-88P-201ENST00000459274 BCL11BQ9C0K0 894 aaPredicted RBP7.27□□□□□ -1.25
RNU1-88P-201ENST00000459274 CCDC87Q9NVE4 849 aa7.27□□□□□ -1.25
RNU1-88P-201ENST00000459274 PALLDQ8WX93 1383 aa7.27□□□□□ -1.25
RNU1-88P-201ENST00000459274 PXDNLA1KZ92 1463 aa7.27□□□□□ -1.25
RNU1-88P-201ENST00000459274 RLBP1P12271 317 aa7.26□□□□□ -1.25
RNU1-88P-201ENST00000459274 GTF2E1P29083 439 aaPredicted RBP7.26□□□□□ -1.25
RNU1-88P-201ENST00000459274 IL6STP40189 918 aaPredicted RBP7.26□□□□□ -1.25
RNU1-88P-201ENST00000459274 G2E3Q7L622 706 aa7.26□□□□□ -1.25
RNU1-88P-201ENST00000459274 DNAJC10Q8IXB1 793 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms