RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 ARHGAP45Q92619 1136 aa19.5■□□□□ 0.71
LSS-205ENST00000457828 PDCL3Q9H2J4 239 aa19.5■□□□□ 0.71
LSS-205ENST00000457828 WDR33Q9C0J8 1336 aaKnown RBP19.5■□□□□ 0.71
LSS-205ENST00000457828 TRPM1Q7Z4N2 1603 aa19.5■□□□□ 0.71
LSS-205ENST00000457828 TULP1O00294 542 aaPredicted RBP19.49■□□□□ 0.71
LSS-205ENST00000457828 ATP6V1AP38606 617 aa19.49■□□□□ 0.71
LSS-205ENST00000457828 PLEKHM2Q8IWE5 1019 aa19.49■□□□□ 0.71
LSS-205ENST00000457828 NRDCO43847 1150 aa19.49■□□□□ 0.71
LSS-205ENST00000457828 PIP4K2AP48426 406 aaPredicted RBP19.48■□□□□ 0.71
LSS-205ENST00000457828 FLIIQ13045 1269 aa19.48■□□□□ 0.71
LSS-205ENST00000457828 HYPKQ9NX55 129 aa19.48■□□□□ 0.71
LSS-205ENST00000457828 BICD2Q8TD16 824 aa19.48■□□□□ 0.71
LSS-205ENST00000457828 ZFYVE9O95405 1425 aa19.48■□□□□ 0.71
LSS-205ENST00000457828 NUTM1Q86Y26 1132 aa19.48■□□□□ 0.71
LSS-205ENST00000457828 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.48■□□□□ 0.71
LSS-205ENST00000457828 KIF1BO60333 1816 aa19.48■□□□□ 0.71
LSS-205ENST00000457828 CD2BP2O95400 341 aaKnown RBP19.48■□□□□ 0.71
LSS-205ENST00000457828 IL13P35225 146 aa19.48■□□□□ 0.71
LSS-205ENST00000457828 DCAF5Q96JK2 942 aa19.48■□□□□ 0.71
LSS-205ENST00000457828 GLI2P10070 1586 aa19.48■□□□□ 0.71
LSS-205ENST00000457828 HTATSF1O43719 755 aaKnown RBP19.47■□□□□ 0.71
LSS-205ENST00000457828 DNAAF4Q8WXU2 420 aa19.47■□□□□ 0.71
LSS-205ENST00000457828 IQGAP3Q86VI3 1631 aa19.47■□□□□ 0.71
LSS-205ENST00000457828 ATP5J2-PTCD1G3V325 749 aa19.47■□□□□ 0.71
LSS-205ENST00000457828 H3BQV1 296 aa19.47■□□□□ 0.71
LSS-205ENST00000457828 MX1P20591 662 aa19.47■□□□□ 0.71
LSS-205ENST00000457828 IFFO2Q5TF58 517 aa19.47■□□□□ 0.71
LSS-205ENST00000457828 TRMT112Q9UI30 125 aaKnown RBP19.47■□□□□ 0.71
LSS-205ENST00000457828 USP25Q9UHP3 1055 aa19.47■□□□□ 0.71
LSS-205ENST00000457828 WASHC4Q2M389 1173 aa19.46■□□□□ 0.71
LSS-205ENST00000457828 MAP3K4Q9Y6R4 1608 aa19.46■□□□□ 0.71
LSS-205ENST00000457828 DCAF8L1A6NGE4 600 aa19.46■□□□□ 0.71
LSS-205ENST00000457828 TMX3Q96JJ7 454 aa19.46■□□□□ 0.71
LSS-205ENST00000457828 BRINP3Q76B58 766 aa19.46■□□□□ 0.71
LSS-205ENST00000457828 GNL2Q13823 731 aaKnown RBP19.46■□□□□ 0.71
LSS-205ENST00000457828 MTERF4Q7Z6M4 381 aaKnown RBP19.46■□□□□ 0.71
LSS-205ENST00000457828 PI4KAP2A4QPH2 592 aa19.45■□□□□ 0.7
LSS-205ENST00000457828 GOLGA6L19H0YKK7 550 aa19.45■□□□□ 0.7
LSS-205ENST00000457828 FOSBP53539 338 aa19.45■□□□□ 0.7
LSS-205ENST00000457828 CNTROBQ8N137 903 aa19.45■□□□□ 0.7
LSS-205ENST00000457828 PI4KAP1Q8N8J0 262 aa19.45■□□□□ 0.7
LSS-205ENST00000457828 SMARCC1Q92922 1105 aaPredicted RBP19.45■□□□□ 0.7
LSS-205ENST00000457828 SYNMO15061 1565 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 DNAJC2Q99543 621 aaKnown RBP19.44■□□□□ 0.7
LSS-205ENST00000457828 PRDM10Q9NQV6 1147 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 A0A087WZG4 1122 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 RFC4P35249 363 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 CWC27Q6UX04 472 aaKnown RBP19.44■□□□□ 0.7
LSS-205ENST00000457828 ANKRD44Q8N8A2 993 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 DCTPP1Q9H773 170 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 CEP126Q9P2H0 1117 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 RNF17Q9BXT8 1623 aaKnown RBP19.44■□□□□ 0.7
LSS-205ENST00000457828 BECN2A8MW95 431 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 RBSNQ9H1K0 784 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 PCDH11XQ9BZA7 1347 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 PCDH11YQ9BZA8 1340 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 FAM184AQ8NB25 1140 aa19.44■□□□□ 0.7
LSS-205ENST00000457828 USP26Q9BXU7 913 aa19.43■□□□□ 0.7
LSS-205ENST00000457828 CDCA7Q9BWT1 371 aaPredicted RBP19.43■□□□□ 0.7
LSS-205ENST00000457828 LRSAM1Q6UWE0 723 aa19.42■□□□□ 0.7
LSS-205ENST00000457828 HMGN5P82970 282 aaKnown RBP19.42■□□□□ 0.7
LSS-205ENST00000457828 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
LSS-205ENST00000457828 HSP90AB3PQ58FF7 597 aa19.42■□□□□ 0.7
LSS-205ENST00000457828 ZNF830Q96NB3 372 aaPredicted RBP19.42■□□□□ 0.7
LSS-205ENST00000457828 CHPF2Q9P2E5 772 aa19.42■□□□□ 0.7
LSS-205ENST00000457828 KIAA0232Q92628 1395 aa19.42■□□□□ 0.7
LSS-205ENST00000457828 RAD21O60216 631 aa19.42■□□□□ 0.7
LSS-205ENST00000457828 ERC1Q8IUD2 1116 aa19.42■□□□□ 0.7
LSS-205ENST00000457828 TRIM34Q9BYJ4 488 aa19.42■□□□□ 0.7
LSS-205ENST00000457828 MAP3K2Q9Y2U5 619 aa19.42■□□□□ 0.7
LSS-205ENST00000457828 RNMTO43148 476 aaKnown RBP19.42■□□□□ 0.7
LSS-205ENST00000457828 AMOTL1Q8IY63 956 aa19.42■□□□□ 0.7
LSS-205ENST00000457828 CHAMP1Q96JM3 812 aa19.42■□□□□ 0.7
LSS-205ENST00000457828 CLTCL1P53675 1640 aa19.41■□□□□ 0.7
LSS-205ENST00000457828 PKP1Q13835 747 aa19.41■□□□□ 0.7
LSS-205ENST00000457828 COPS6Q7L5N1 327 aa19.41■□□□□ 0.7
LSS-205ENST00000457828 FSD1Q9BTV5 496 aa19.41■□□□□ 0.7
LSS-205ENST00000457828 KDM5AP29375 1690 aaKnown RBP19.41■□□□□ 0.7
LSS-205ENST00000457828 ABCA6Q8N139 1617 aa19.41■□□□□ 0.7
LSS-205ENST00000457828 ANKRD13DQ6ZTN6 518 aa19.41■□□□□ 0.7
LSS-205ENST00000457828 JARID2Q92833 1246 aaPredicted RBP19.41■□□□□ 0.7
LSS-205ENST00000457828 TRIM5Q9C035 493 aa19.41■□□□□ 0.7
LSS-205ENST00000457828 MAP3K5Q99683 1374 aa19.41■□□□□ 0.7
LSS-205ENST00000457828 PTPRMP28827 1452 aa19.4■□□□□ 0.7
LSS-205ENST00000457828 OFD1O75665 1012 aa19.4■□□□□ 0.7
LSS-205ENST00000457828 CDK11BP21127 795 aaKnown RBP19.4■□□□□ 0.7
LSS-205ENST00000457828 IGHMBP2P38935 993 aaKnown RBP19.4■□□□□ 0.7
LSS-205ENST00000457828 XAGE3Q8WTP9 111 aa19.4■□□□□ 0.7
LSS-205ENST00000457828 FERMT3Q86UX7 667 aa19.4■□□□□ 0.7
LSS-205ENST00000457828 PDE1AP54750 535 aa19.4■□□□□ 0.7
LSS-205ENST00000457828 LGR6Q9HBX8 967 aa19.4■□□□□ 0.7
LSS-205ENST00000457828 CEP85Q6P2H3 762 aa19.39■□□□□ 0.69
LSS-205ENST00000457828 SASS6Q6UVJ0 657 aa19.39■□□□□ 0.69
LSS-205ENST00000457828 CCDC158Q5M9N0 1113 aa19.39■□□□□ 0.69
LSS-205ENST00000457828 ZKSCAN5Q9Y2L8 839 aa19.39■□□□□ 0.69
LSS-205ENST00000457828 UNC13BO14795 1591 aa19.39■□□□□ 0.69
LSS-205ENST00000457828 LRRFIP2Q9Y608 721 aaKnown RBP19.39■□□□□ 0.69
LSS-205ENST00000457828 AGLP35573 1532 aa19.39■□□□□ 0.69
LSS-205ENST00000457828 INO80Q9ULG1 1556 aaPredicted RBP19.38■□□□□ 0.69
LSS-205ENST00000457828 LETM1O95202 739 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms