RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 GDPD2Q9HCC8 539 aa11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 KRT85P78386 507 aa11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 HSP90AB4PQ58FF6 505 aa11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 RALYLQ86SE5 291 aaKnown RBP11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 PLEKHG3A1L390 1219 aa11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 SERPINC1P01008 464 aa11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 RDXP35241 583 aaKnown RBP11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 WASHC4Q2M389 1173 aa11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 CNTROBQ8N137 903 aa11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 IP6K1Q92551 441 aa11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 PRDM15P57071 1507 aaPredicted RBP11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 ATP6V1AP38606 617 aa11.52□□□□□ -0.56
MSC-AS1-201ENST00000457356 CAMK4Q16566 473 aa11.52□□□□□ -0.56
MSC-AS1-201ENST00000457356 PSMA5P28066 241 aa11.52□□□□□ -0.56
MSC-AS1-201ENST00000457356 ME1P48163 572 aa11.52□□□□□ -0.56
MSC-AS1-201ENST00000457356 SAFBQ15424 915 aaKnown RBP eCLIP11.52□□□□□ -0.56
MSC-AS1-201ENST00000457356 TAF7Q15545 349 aaPredicted RBP11.52□□□□□ -0.56
MSC-AS1-201ENST00000457356 UBXN4Q92575 508 aa11.52□□□□□ -0.56
MSC-AS1-201ENST00000457356 PUS7Q96PZ0 661 aaKnown RBP11.52□□□□□ -0.56
MSC-AS1-201ENST00000457356 CT47B1P0C2W7 299 aaPredicted RBP11.52□□□□□ -0.57
MSC-AS1-201ENST00000457356 STK32BQ9NY57 414 aa11.52□□□□□ -0.57
MSC-AS1-201ENST00000457356 SLC4A2P04920 1241 aa11.52□□□□□ -0.57
MSC-AS1-201ENST00000457356 STK38Q15208 465 aa11.52□□□□□ -0.57
MSC-AS1-201ENST00000457356 ZNF219Q9P2Y4 722 aaPredicted RBP11.52□□□□□ -0.57
MSC-AS1-201ENST00000457356 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
MSC-AS1-201ENST00000457356 POLD1P28340 1107 aa11.51□□□□□ -0.57
MSC-AS1-201ENST00000457356 TMEM57Q8N5G2 664 aa11.51□□□□□ -0.57
MSC-AS1-201ENST00000457356 FLT4P35916 1363 aa11.51□□□□□ -0.57
MSC-AS1-201ENST00000457356 GNAI3P08754 354 aa11.51□□□□□ -0.57
MSC-AS1-201ENST00000457356 TMPOP42166 694 aaKnown RBP11.51□□□□□ -0.57
MSC-AS1-201ENST00000457356 ERCC4Q92889 916 aaPredicted RBP11.51□□□□□ -0.57
MSC-AS1-201ENST00000457356 PLCD4Q9BRC7 762 aa11.51□□□□□ -0.57
MSC-AS1-201ENST00000457356 NOL10Q9BSC4 688 aaKnown RBP11.51□□□□□ -0.57
MSC-AS1-201ENST00000457356 IL1RAPL2Q9NP60 686 aa11.51□□□□□ -0.57
MSC-AS1-201ENST00000457356 ADGBQ8N7X0 1667 aa11.51□□□□□ -0.57
MSC-AS1-201ENST00000457356 DIP2CQ9Y2E4 1556 aa11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 A0A1W2PP64 1363 aa11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 NSD2O96028 1365 aa11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 HOXC9P31274 260 aa11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 LRRFIP1Q32MZ4 808 aaKnown RBP11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 TESK2Q96S53 571 aa11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 ARHGEF40Q8TER5 1519 aa11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 OFD1O75665 1012 aa11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 PPP4R3BQ5MIZ7 849 aa11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 SETD1BQ9UPS6 1966 aaKnown RBP11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 RRP12Q5JTH9 1297 aaKnown RBP11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 C16orf45Q96MC5 204 aaPredicted RBP11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 NUP62CLQ9H1M0 184 aa11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 CYP46A1Q9Y6A2 500 aa11.5□□□□□ -0.57
MSC-AS1-201ENST00000457356 SEC24BO95487 1268 aa11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 EIF4A2Q14240 407 aaKnown RBP11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 CDC42BPBQ9Y5S2 1711 aa11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 POLR3GO15318 223 aaPredicted RBP11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 TEX13AQ9BXU3 409 aaPredicted RBP11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 AFF2P51816 1311 aa11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 RAD21O60216 631 aa11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 IGHDP01880 384 aa11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 CCDC47Q96A33 483 aaKnown RBP11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 ZNF830Q96NB3 372 aaPredicted RBP11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 TRMT1Q9NXH9 659 aaKnown RBP11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 RIMS1Q86UR5 1692 aaKnown RBP11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 C8orf34Q49A92 452 aa11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 FAM182BQ5T319 152 aa11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 LARP1Q6PKG0 1096 aaKnown RBP11.49□□□□□ -0.57
MSC-AS1-201ENST00000457356 IBSPP21815 317 aaPredicted RBP11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 CALRP27797 417 aaKnown RBP11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 SLC39A6Q13433 755 aa11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 PTPN14Q15678 1187 aa11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 SPATA32Q96LK8 384 aa11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 CCDC85AQ96PX6 553 aaPredicted RBP11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 RBM27Q9P2N5 1060 aaKnown RBP11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 DHX16O60231 1041 aaKnown RBP11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 TSC1Q92574 1164 aa11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 EYA1Q99502 592 aa11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 GNAI2P04899 355 aa11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 CDR1P51861 262 aa11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 CCDC102AQ96A19 550 aa11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 DNAJC2Q99543 621 aaKnown RBP11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 MPHOSPH8Q99549 860 aa11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 EXOC6BQ9Y2D4 811 aa11.48□□□□□ -0.57
MSC-AS1-201ENST00000457356 CCDC191Q8NCU4 936 aa11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 CCNL1Q9UK58 526 aaPredicted RBP11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 KIAA0232Q92628 1395 aa11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 PRIM1P49642 420 aaKnown RBP11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 FAM193AP78312 1265 aa11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 CWC27Q6UX04 472 aaKnown RBP11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 WDR63Q8IWG1 891 aa11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 TRIM34Q9BYJ4 488 aa11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 CNNM1Q9NRU3 951 aa11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 KDM5CP41229 1560 aa11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 TNNT1P13805 278 aa11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 MTMR7Q9Y216 660 aa11.47□□□□□ -0.57
MSC-AS1-201ENST00000457356 MAP3K4Q9Y6R4 1608 aa11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 GPTP24298 496 aa11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 TMCO3Q6UWJ1 677 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms