RNA–Protein interactions for RNA: ENST00000457288.2

CBWD6-204, Transcript of COBW domain containing 6, human

TSL 3

Gene CBWD6, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD6-204	ENST00000457288	HEG1	Q9ULI3	1381 aa		11.6	□□□□□ -0.55
CBWD6-204	ENST00000457288	CNGB1	Q14028	1251 aa	Predicted RBP	11.6	□□□□□ -0.55
CBWD6-204	ENST00000457288	PHACTR3	Q96KR7	559 aa		11.6	□□□□□ -0.55
CBWD6-204	ENST00000457288	SRP68	Q9UHB9	627 aa	Known RBP	11.6	□□□□□ -0.55
CBWD6-204	ENST00000457288	GOLGB1	Q14789	3259 aa	Known RBP	11.6	□□□□□ -0.55
CBWD6-204	ENST00000457288	NPM3	O75607	178 aa	Known RBP	11.59	□□□□□ -0.55
CBWD6-204	ENST00000457288	TGFB2	P61812	414 aa		11.59	□□□□□ -0.55
CBWD6-204	ENST00000457288	DDR1	Q08345	913 aa		11.59	□□□□□ -0.55
CBWD6-204	ENST00000457288	FKBP8	Q14318	412 aa		11.59	□□□□□ -0.55
CBWD6-204	ENST00000457288	ZBTB1	Q9Y2K1	713 aa		11.59	□□□□□ -0.55
CBWD6-204	ENST00000457288	KCNA4	P22459	653 aa		11.58	□□□□□ -0.56
CBWD6-204	ENST00000457288	ZNF790	Q6PG37	636 aa		11.58	□□□□□ -0.56
CBWD6-204	ENST00000457288	ZNF496	Q96IT1	587 aa	Predicted RBP	11.58	□□□□□ -0.56
CBWD6-204	ENST00000457288	NUDC	Q9Y266	331 aa		11.58	□□□□□ -0.56
CBWD6-204	ENST00000457288	ATP10D	Q9P241	1426 aa		11.58	□□□□□ -0.56
CBWD6-204	ENST00000457288	ANKRD31	Q8N7Z5	1873 aa		11.57	□□□□□ -0.56
CBWD6-204	ENST00000457288	POLRMT	O00411	1230 aa	Known RBP	11.57	□□□□□ -0.56
CBWD6-204	ENST00000457288	FCHSD2	O94868	740 aa		11.57	□□□□□ -0.56
CBWD6-204	ENST00000457288	TM4SF1	P30408	202 aa		11.57	□□□□□ -0.56
CBWD6-204	ENST00000457288	TEF	Q10587	303 aa		11.57	□□□□□ -0.56
CBWD6-204	ENST00000457288	TTC5	Q8N0Z6	440 aa		11.57	□□□□□ -0.56
CBWD6-204	ENST00000457288	PARP3	Q9Y6F1	533 aa		11.57	□□□□□ -0.56
CBWD6-204	ENST00000457288	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.56	□□□□□ -0.56
CBWD6-204	ENST00000457288	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
CBWD6-204	ENST00000457288	BCL2L12	Q9HB09	334 aa		11.56	□□□□□ -0.56
CBWD6-204	ENST00000457288	NARF	Q9UHQ1	456 aa		11.56	□□□□□ -0.56
CBWD6-204	ENST00000457288	COL11A2	P13942	1736 aa	Predicted RBP	11.55	□□□□□ -0.56
CBWD6-204	ENST00000457288	KCNA3	P22001	575 aa		11.55	□□□□□ -0.56
CBWD6-204	ENST00000457288	EIF5	P55010	431 aa	Known RBP	11.55	□□□□□ -0.56
CBWD6-204	ENST00000457288	USPL1	Q5W0Q7	1092 aa		11.55	□□□□□ -0.56
CBWD6-204	ENST00000457288	SBF1	O95248	1867 aa		11.55	□□□□□ -0.56
CBWD6-204	ENST00000457288	HTATSF1	O43719	755 aa	Known RBP	11.54	□□□□□ -0.56
CBWD6-204	ENST00000457288	ZPR1	O75312	459 aa		11.54	□□□□□ -0.56
CBWD6-204	ENST00000457288	STARD3NL	O95772	234 aa		11.54	□□□□□ -0.56
CBWD6-204	ENST00000457288	DPEP1	P16444	411 aa		11.54	□□□□□ -0.56
CBWD6-204	ENST00000457288	NFIX	Q14938	502 aa		11.54	□□□□□ -0.56
CBWD6-204	ENST00000457288	FMNL2	Q96PY5	1086 aa		11.54	□□□□□ -0.56
CBWD6-204	ENST00000457288	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.54	□□□□□ -0.56
CBWD6-204	ENST00000457288	WWC3	Q9ULE0	1092 aa		11.54	□□□□□ -0.56
CBWD6-204	ENST00000457288	ARFGEF2	Q9Y6D5	1785 aa		11.54	□□□□□ -0.56
CBWD6-204	ENST00000457288		A0A0G2JLW4	131 aa		11.53	□□□□□ -0.56
CBWD6-204	ENST00000457288	KCNQ3	O43525	872 aa		11.53	□□□□□ -0.56
CBWD6-204	ENST00000457288	PLEKHF1	Q96S99	279 aa		11.53	□□□□□ -0.56
CBWD6-204	ENST00000457288	BTBD11	A6QL63	1104 aa		11.52	□□□□□ -0.57
CBWD6-204	ENST00000457288	IL6ST	P40189	918 aa	Predicted RBP	11.52	□□□□□ -0.57
CBWD6-204	ENST00000457288	C1QTNF8	P60827	252 aa		11.52	□□□□□ -0.57
CBWD6-204	ENST00000457288	MCM10	Q7L590	875 aa		11.52	□□□□□ -0.57
CBWD6-204	ENST00000457288	CARMIL3	Q8ND23	1372 aa		11.52	□□□□□ -0.57
CBWD6-204	ENST00000457288		A0A087WZG4	1122 aa		11.51	□□□□□ -0.57
CBWD6-204	ENST00000457288	GIGYF1	O75420	1035 aa	Predicted RBP	11.51	□□□□□ -0.57
CBWD6-204	ENST00000457288	CANX	P27824	592 aa	Known RBP	11.51	□□□□□ -0.57
CBWD6-204	ENST00000457288	BCS1L	Q9Y276	419 aa		11.51	□□□□□ -0.57
CBWD6-204	ENST00000457288	DCTN1	Q14203	1278 aa		11.5	□□□□□ -0.57
CBWD6-204	ENST00000457288	RTF1	Q92541	710 aa	Known RBP	11.5	□□□□□ -0.57
CBWD6-204	ENST00000457288	PIM2	Q9P1W9	311 aa		11.5	□□□□□ -0.57
CBWD6-204	ENST00000457288	TIAM2	Q8IVF5	1701 aa		11.49	□□□□□ -0.57
CBWD6-204	ENST00000457288	PRAMEF22	A3QJZ6	481 aa		11.49	□□□□□ -0.57
CBWD6-204	ENST00000457288	CAMTA2	O94983	1202 aa		11.49	□□□□□ -0.57
CBWD6-204	ENST00000457288	A1BG	P04217	495 aa		11.49	□□□□□ -0.57
CBWD6-204	ENST00000457288	SERPINB2	P05120	415 aa		11.49	□□□□□ -0.57
CBWD6-204	ENST00000457288	CHRNA5	P30532	468 aa		11.49	□□□□□ -0.57
CBWD6-204	ENST00000457288	RALBP1	Q15311	655 aa		11.49	□□□□□ -0.57
CBWD6-204	ENST00000457288	USP16	Q9Y5T5	823 aa		11.49	□□□□□ -0.57
CBWD6-204	ENST00000457288	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.49	□□□□□ -0.57
CBWD6-204	ENST00000457288	CACNA1S	Q13698	1873 aa		11.49	□□□□□ -0.57
CBWD6-204	ENST00000457288	FER1L6	Q2WGJ9	1857 aa		11.49	□□□□□ -0.57
CBWD6-204	ENST00000457288	SNRPA1	P09661	255 aa	Known RBP	11.48	□□□□□ -0.57
CBWD6-204	ENST00000457288	TBC1D9B	Q66K14	1250 aa		11.48	□□□□□ -0.57
CBWD6-204	ENST00000457288	CCDC88A	Q3V6T2	1871 aa		11.48	□□□□□ -0.57
CBWD6-204	ENST00000457288	DICER1	Q9UPY3	1922 aa	Known RBP	11.47	□□□□□ -0.57
CBWD6-204	ENST00000457288	NUP98	P52948	1817 aa		11.47	□□□□□ -0.57
CBWD6-204	ENST00000457288	RGL2	O15211	777 aa		11.47	□□□□□ -0.57
CBWD6-204	ENST00000457288	TAF7	Q15545	349 aa	Predicted RBP	11.47	□□□□□ -0.57
CBWD6-204	ENST00000457288	NFE2L2	Q16236	605 aa		11.47	□□□□□ -0.57
CBWD6-204	ENST00000457288	DALRD3	Q5D0E6	543 aa	Known RBP	11.47	□□□□□ -0.57
CBWD6-204	ENST00000457288	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.47	□□□□□ -0.57
CBWD6-204	ENST00000457288	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.46	□□□□□ -0.57
CBWD6-204	ENST00000457288	NBPF26	B4DH59	902 aa		11.46	□□□□□ -0.57
CBWD6-204	ENST00000457288	NBPF10	Q6P3W6	841 aa	Known RBP	11.46	□□□□□ -0.57
CBWD6-204	ENST00000457288	NBPF15	Q8N660	670 aa		11.46	□□□□□ -0.57
CBWD6-204	ENST00000457288	TBC1D2B	Q9UPU7	963 aa		11.46	□□□□□ -0.57
CBWD6-204	ENST00000457288	KIF3C	O14782	793 aa		11.45	□□□□□ -0.58
CBWD6-204	ENST00000457288	NEFM	P07197	916 aa		11.45	□□□□□ -0.58
CBWD6-204	ENST00000457288	PRR5L	Q6MZQ0	368 aa		11.45	□□□□□ -0.58
CBWD6-204	ENST00000457288	ARHGAP27	Q6ZUM4	889 aa		11.45	□□□□□ -0.58
CBWD6-204	ENST00000457288	DZIP3	Q86Y13	1208 aa	Known RBP	11.45	□□□□□ -0.58
CBWD6-204	ENST00000457288	PNISR	Q8TF01	805 aa	Known RBP	11.45	□□□□□ -0.58
CBWD6-204	ENST00000457288	SLX4	Q8IY92	1834 aa		11.44	□□□□□ -0.58
CBWD6-204	ENST00000457288	MAPK8IP3	Q9UPT6	1336 aa		11.44	□□□□□ -0.58
CBWD6-204	ENST00000457288	PIP4K2A	P48426	406 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD6-204	ENST00000457288	CLEC4G	Q6UXB4	293 aa		11.44	□□□□□ -0.58
CBWD6-204	ENST00000457288	BICDL1	Q6ZP65	573 aa		11.44	□□□□□ -0.58
CBWD6-204	ENST00000457288	PNN	Q9H307	717 aa	Known RBP	11.44	□□□□□ -0.58
CBWD6-204	ENST00000457288	PDZRN3	Q9UPQ7	1066 aa		11.44	□□□□□ -0.58
CBWD6-204	ENST00000457288	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD6-204	ENST00000457288	ANKRD36C	Q5JPF3	1778 aa		11.44	□□□□□ -0.58
CBWD6-204	ENST00000457288	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.43	□□□□□ -0.58
CBWD6-204	ENST00000457288	SENP3-EIF4A1	A0A087X0R7	540 aa		11.43	□□□□□ -0.58
CBWD6-204	ENST00000457288	EIF4A1	P60842	406 aa	Known RBP	11.43	□□□□□ -0.58
CBWD6-204	ENST00000457288	DDX10	Q13206	875 aa	Known RBP	11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms