RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 TCERG1O14776 1098 aaKnown RBP18.16■□□□□ 0.5
LINC00887-204ENST00000456816 VAMP4O75379 141 aa18.16■□□□□ 0.5
LINC00887-204ENST00000456816 CYP19A1P11511 503 aaPredicted RBP18.16■□□□□ 0.5
LINC00887-204ENST00000456816 CRKLP46109 303 aaKnown RBP18.16■□□□□ 0.5
LINC00887-204ENST00000456816 AK7Q96M32 723 aa18.16■□□□□ 0.5
LINC00887-204ENST00000456816 LRRC4BQ9NT99 713 aa18.16■□□□□ 0.5
LINC00887-204ENST00000456816 CCDC87Q9NVE4 849 aa18.16■□□□□ 0.5
LINC00887-204ENST00000456816 C5P01031 1676 aa18.15■□□□□ 0.5
LINC00887-204ENST00000456816 TJP1Q07157 1748 aa18.15■□□□□ 0.5
LINC00887-204ENST00000456816 RGPD3A6NKT7 1758 aaPredicted RBP18.15■□□□□ 0.5
LINC00887-204ENST00000456816 RGPD4Q7Z3J3 1758 aa18.15■□□□□ 0.5
LINC00887-204ENST00000456816 NPM2Q86SE8 214 aaKnown RBP18.15■□□□□ 0.5
LINC00887-204ENST00000456816 PROM2Q8N271 834 aa18.15■□□□□ 0.5
LINC00887-204ENST00000456816 ZNF330Q9Y3S2 320 aaPredicted RBP18.15■□□□□ 0.5
LINC00887-204ENST00000456816 A1BGP04217 495 aa18.14■□□□□ 0.49
LINC00887-204ENST00000456816 CANXP27824 592 aaKnown RBP18.14■□□□□ 0.49
LINC00887-204ENST00000456816 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.49
LINC00887-204ENST00000456816 ZNF831Q5JPB2 1677 aa18.13■□□□□ 0.49
LINC00887-204ENST00000456816 GNPATO15228 680 aa18.13■□□□□ 0.49
LINC00887-204ENST00000456816 MYL6BP14649 208 aa18.13■□□□□ 0.49
LINC00887-204ENST00000456816 PIP4K2AP48426 406 aaPredicted RBP18.13■□□□□ 0.49
LINC00887-204ENST00000456816 ZNF428Q96B54 188 aa18.13■□□□□ 0.49
LINC00887-204ENST00000456816 CHPF2Q9P2E5 772 aa18.13■□□□□ 0.49
LINC00887-204ENST00000456816 CNTNAP4Q9C0A0 1308 aa18.13■□□□□ 0.49
LINC00887-204ENST00000456816 ARXQ96QS3 562 aa18.12■□□□□ 0.49
LINC00887-204ENST00000456816 BCL2L13Q9BXK5 485 aa18.12■□□□□ 0.49
LINC00887-204ENST00000456816 SMC4Q9NTJ3 1288 aa18.12■□□□□ 0.49
LINC00887-204ENST00000456816 DBF4Q9UBU7 674 aaPredicted RBP18.12■□□□□ 0.49
LINC00887-204ENST00000456816 ERBB4Q15303 1308 aa18.12■□□□□ 0.49
LINC00887-204ENST00000456816 CENPBP07199 599 aaPredicted RBP18.11■□□□□ 0.49
LINC00887-204ENST00000456816 STK32BQ9NY57 414 aa18.11■□□□□ 0.49
LINC00887-204ENST00000456816 ZBTB1Q9Y2K1 713 aa18.11■□□□□ 0.49
LINC00887-204ENST00000456816 CICQ96RK0 1608 aaPredicted RBP18.11■□□□□ 0.49
LINC00887-204ENST00000456816 ANXA1P04083 346 aa18.1■□□□□ 0.49
LINC00887-204ENST00000456816 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
LINC00887-204ENST00000456816 RC3H1Q5TC82 1133 aaKnown RBP18.1■□□□□ 0.49
LINC00887-204ENST00000456816 NBPF14Q5TI25 921 aa18.1■□□□□ 0.49
LINC00887-204ENST00000456816 INTS5Q6P9B9 1019 aaKnown RBP18.1■□□□□ 0.49
LINC00887-204ENST00000456816 DDX21Q9NR30 783 aaKnown RBP eCLIP18.1■□□□□ 0.49
LINC00887-204ENST00000456816 TFCP2L1Q9NZI6 479 aa18.1■□□□□ 0.49
LINC00887-204ENST00000456816 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
LINC00887-204ENST00000456816 C4BP0C0L5 1744 aa18.09■□□□□ 0.49
LINC00887-204ENST00000456816 PHF14O94880 888 aa18.09■□□□□ 0.49
LINC00887-204ENST00000456816 RARSP54136 660 aaKnown RBP18.09■□□□□ 0.49
LINC00887-204ENST00000456816 ALDH1L2Q3SY69 923 aa18.09■□□□□ 0.49
LINC00887-204ENST00000456816 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
LINC00887-204ENST00000456816 HYPKQ9NX55 129 aa18.09■□□□□ 0.49
LINC00887-204ENST00000456816 RTCBQ9Y3I0 505 aaKnown RBP18.09■□□□□ 0.49
LINC00887-204ENST00000456816 NBPF26B4DH59 902 aa18.08■□□□□ 0.48
LINC00887-204ENST00000456816 PROSER3Q2NL68 480 aa18.08■□□□□ 0.48
LINC00887-204ENST00000456816 NBPF10Q6P3W6 841 aaKnown RBP18.08■□□□□ 0.48
LINC00887-204ENST00000456816 NBPF15Q8N660 670 aa18.08■□□□□ 0.48
LINC00887-204ENST00000456816 COL5A3P25940 1745 aaPredicted RBP18.08■□□□□ 0.48
LINC00887-204ENST00000456816 RREB1Q92766 1687 aa18.07■□□□□ 0.48
LINC00887-204ENST00000456816 RPS6KA4O75676 772 aa18.07■□□□□ 0.48
LINC00887-204ENST00000456816 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
LINC00887-204ENST00000456816 AIMP1Q12904 312 aaKnown RBP18.07■□□□□ 0.48
LINC00887-204ENST00000456816 ZNF827Q17R98 1081 aa18.07■□□□□ 0.48
LINC00887-204ENST00000456816 A0A087WZG4 1122 aa18.06■□□□□ 0.48
LINC00887-204ENST00000456816 PDIA6Q15084 440 aa18.06■□□□□ 0.48
LINC00887-204ENST00000456816 TAF1LQ8IZX4 1826 aa18.06■□□□□ 0.48
LINC00887-204ENST00000456816 COL15A1P39059 1388 aa18.05■□□□□ 0.48
LINC00887-204ENST00000456816 BCAR3O75815 825 aa18.05■□□□□ 0.48
LINC00887-204ENST00000456816 KIF6Q6ZMV9 814 aa18.05■□□□□ 0.48
LINC00887-204ENST00000456816 MRPL50Q8N5N7 158 aaKnown RBP18.05■□□□□ 0.48
LINC00887-204ENST00000456816 XAGE3Q8WTP9 111 aa18.05■□□□□ 0.48
LINC00887-204ENST00000456816 AKT1S1Q96B36 256 aa18.05■□□□□ 0.48
LINC00887-204ENST00000456816 ANO8Q9HCE9 1232 aaPredicted RBP18.05■□□□□ 0.48
LINC00887-204ENST00000456816 NUP188Q5SRE5 1749 aa18.05■□□□□ 0.48
LINC00887-204ENST00000456816 KIF16BQ96L93 1317 aa18.04■□□□□ 0.48
LINC00887-204ENST00000456816 SLC15A2Q16348 729 aa18.04■□□□□ 0.48
LINC00887-204ENST00000456816 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
LINC00887-204ENST00000456816 SMIM5Q71RC9 77 aa18.04■□□□□ 0.48
LINC00887-204ENST00000456816 COPS6Q7L5N1 327 aa18.04■□□□□ 0.48
LINC00887-204ENST00000456816 FRAT1Q92837 279 aaPredicted RBP18.04■□□□□ 0.48
LINC00887-204ENST00000456816 PHAXQ9H814 394 aaKnown RBP18.04■□□□□ 0.48
LINC00887-204ENST00000456816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.03■□□□□ 0.48
LINC00887-204ENST00000456816 DDX58O95786 925 aaKnown RBP18.03■□□□□ 0.48
LINC00887-204ENST00000456816 SSFA2P28290 1259 aa18.03■□□□□ 0.48
LINC00887-204ENST00000456816 RFC4P35249 363 aa18.03■□□□□ 0.48
LINC00887-204ENST00000456816 EIF5P55010 431 aaKnown RBP18.03■□□□□ 0.48
LINC00887-204ENST00000456816 FLIIQ13045 1269 aa18.03■□□□□ 0.48
LINC00887-204ENST00000456816 FKBP5Q13451 457 aaPredicted RBP18.03■□□□□ 0.48
LINC00887-204ENST00000456816 DZIP3Q86Y13 1208 aaKnown RBP18.03■□□□□ 0.48
LINC00887-204ENST00000456816 G2E3Q7L622 706 aa18.02■□□□□ 0.48
LINC00887-204ENST00000456816 FLAD1Q8NFF5 587 aa18.02■□□□□ 0.48
LINC00887-204ENST00000456816 TBC1D2BQ9UPU7 963 aa18.02■□□□□ 0.48
LINC00887-204ENST00000456816 IPO8O15397 1037 aaKnown RBP18.01■□□□□ 0.47
LINC00887-204ENST00000456816 ZPR1O75312 459 aa18.01■□□□□ 0.47
LINC00887-204ENST00000456816 ZBTB3Q9H5J0 574 aa18.01■□□□□ 0.47
LINC00887-204ENST00000456816 NOB1Q9ULX3 412 aaKnown RBP18.01■□□□□ 0.47
LINC00887-204ENST00000456816 TTLL7Q6ZT98 887 aa18■□□□□ 0.47
LINC00887-204ENST00000456816 RIC3Q7Z5B4 369 aa18■□□□□ 0.47
LINC00887-204ENST00000456816 AMIGO3Q86WK7 504 aa18■□□□□ 0.47
LINC00887-204ENST00000456816 GOLGA6L2Q8N9W4 650 aaPredicted RBP18■□□□□ 0.47
LINC00887-204ENST00000456816 ARHGEF1Q92888 912 aaKnown RBP18■□□□□ 0.47
LINC00887-204ENST00000456816 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
LINC00887-204ENST00000456816 PTPRCP08575 1304 aa17.99■□□□□ 0.47
LINC00887-204ENST00000456816 LRP10Q7Z4F1 713 aa17.99■□□□□ 0.47
LINC00887-204ENST00000456816 BRPF1P55201 1214 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms