RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SSH2Q76I76 1423 aa12.34□□□□□ -0.43
CLIP4-208ENST00000456385 GOLGA6L6A8MZA4 724 aa12.34□□□□□ -0.43
CLIP4-208ENST00000456385 TPM3P06753 285 aa12.34□□□□□ -0.43
CLIP4-208ENST00000456385 CLTCQ00610 1675 aaKnown RBP12.34□□□□□ -0.43
CLIP4-208ENST00000456385 CCDC192P0DO97 292 aa12.33□□□□□ -0.44
CLIP4-208ENST00000456385 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-208ENST00000456385 NUTM1Q86Y26 1132 aa12.33□□□□□ -0.44
CLIP4-208ENST00000456385 HECW2Q9P2P5 1572 aa12.33□□□□□ -0.44
CLIP4-208ENST00000456385 NCKAP5LQ9HCH0 1330 aa12.33□□□□□ -0.44
CLIP4-208ENST00000456385 CDK12Q9NYV4 1490 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-208ENST00000456385 GJB2P29033 226 aa12.33□□□□□ -0.44
CLIP4-208ENST00000456385 CCT4P50991 539 aaKnown RBP12.33□□□□□ -0.44
CLIP4-208ENST00000456385 CCDC83Q8IWF9 413 aa12.33□□□□□ -0.44
CLIP4-208ENST00000456385 STAP2Q9UGK3 403 aa12.33□□□□□ -0.44
CLIP4-208ENST00000456385 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
CLIP4-208ENST00000456385 MTMR6Q9Y217 621 aa12.32□□□□□ -0.44
CLIP4-208ENST00000456385 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-208ENST00000456385 ATP6V1DQ9Y5K8 247 aa12.32□□□□□ -0.44
CLIP4-208ENST00000456385 TNNT1P13805 278 aa12.32□□□□□ -0.44
CLIP4-208ENST00000456385 DRC7Q8IY82 874 aa12.32□□□□□ -0.44
CLIP4-208ENST00000456385 CKAP2LQ8IYA6 745 aa12.32□□□□□ -0.44
CLIP4-208ENST00000456385 FAM200AQ8TCP9 573 aa12.32□□□□□ -0.44
CLIP4-208ENST00000456385 TMEM51Q9NW97 253 aa12.32□□□□□ -0.44
CLIP4-208ENST00000456385 MRVI1Q9Y6F6 885 aa12.32□□□□□ -0.44
CLIP4-208ENST00000456385 VPS37CA5D8V6 355 aaPredicted RBP12.31□□□□□ -0.44
CLIP4-208ENST00000456385 SLFN14P0C7P3 912 aa12.31□□□□□ -0.44
CLIP4-208ENST00000456385 FAM173BQ6P4H8 233 aa12.31□□□□□ -0.44
CLIP4-208ENST00000456385 DDX41Q9UJV9 622 aaKnown RBP12.31□□□□□ -0.44
CLIP4-208ENST00000456385 SPG7Q9UQ90 795 aa12.31□□□□□ -0.44
CLIP4-208ENST00000456385 RAD50Q92878 1312 aa12.31□□□□□ -0.44
CLIP4-208ENST00000456385 TUBGCP6Q96RT7 1819 aa12.31□□□□□ -0.44
CLIP4-208ENST00000456385 SMTNL1A8MU46 457 aa12.31□□□□□ -0.44
CLIP4-208ENST00000456385 LIG1P18858 919 aa12.31□□□□□ -0.44
CLIP4-208ENST00000456385 CASTP20810 708 aaKnown RBP12.31□□□□□ -0.44
CLIP4-208ENST00000456385 ATP8B2P98198 1209 aa12.31□□□□□ -0.44
CLIP4-208ENST00000456385 TYRO3Q06418 890 aa12.31□□□□□ -0.44
CLIP4-208ENST00000456385 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
CLIP4-208ENST00000456385 COG3Q96JB2 828 aa12.31□□□□□ -0.44
CLIP4-208ENST00000456385 LRRFIP2Q9Y608 721 aaKnown RBP12.31□□□□□ -0.44
CLIP4-208ENST00000456385 SGSM2O43147 1006 aa12.3□□□□□ -0.44
CLIP4-208ENST00000456385 EIF4A2Q14240 407 aaKnown RBP12.3□□□□□ -0.44
CLIP4-208ENST00000456385 ZSCAN25Q6NSZ9 544 aa12.3□□□□□ -0.44
CLIP4-208ENST00000456385 DDX54Q8TDD1 881 aaKnown RBP12.3□□□□□ -0.44
CLIP4-208ENST00000456385 LSG1Q9H089 658 aaKnown RBP12.3□□□□□ -0.44
CLIP4-208ENST00000456385 FOXO3O43524 673 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 ANO6Q4KMQ2 910 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 CWC27Q6UX04 472 aaKnown RBP12.29□□□□□ -0.44
CLIP4-208ENST00000456385 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 FERMT3Q86UX7 667 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 ZNF592Q92610 1267 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 HYPKQ9NX55 129 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 MAP3K11Q16584 847 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 ADCK5Q3MIX3 580 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 TRIM5Q9C035 493 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 CBX8Q9HC52 389 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLIP4-208ENST00000456385 V9GYY5 206 aaPredicted RBP12.29□□□□□ -0.44
CLIP4-208ENST00000456385 ATP7BP35670 1465 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 AATKQ6ZMQ8 1374 aa12.29□□□□□ -0.44
CLIP4-208ENST00000456385 ST3GAL1Q11201 340 aa12.28□□□□□ -0.44
CLIP4-208ENST00000456385 NECAB1Q8N987 351 aa12.28□□□□□ -0.44
CLIP4-208ENST00000456385 CCDC112Q8NEF3 446 aa12.28□□□□□ -0.44
CLIP4-208ENST00000456385 KIF18AQ8NI77 898 aa12.28□□□□□ -0.44
CLIP4-208ENST00000456385 NUP62CLQ9H1M0 184 aa12.28□□□□□ -0.44
CLIP4-208ENST00000456385 TSPYL4Q9UJ04 414 aa12.28□□□□□ -0.44
CLIP4-208ENST00000456385 GABPB1Q06547 395 aaPredicted RBP12.28□□□□□ -0.44
CLIP4-208ENST00000456385 SYCP1Q15431 976 aa12.28□□□□□ -0.44
CLIP4-208ENST00000456385 TPD52L1Q16890 204 aaPredicted RBP12.28□□□□□ -0.44
CLIP4-208ENST00000456385 CCDC144BQ3MJ40 725 aa12.28□□□□□ -0.44
CLIP4-208ENST00000456385 CCDC144CPQ8IYA2 1237 aa12.28□□□□□ -0.44
CLIP4-208ENST00000456385 PI4K2BQ8TCG2 481 aa12.28□□□□□ -0.44
CLIP4-208ENST00000456385 CACTINQ8WUQ7 758 aaKnown RBP12.28□□□□□ -0.44
CLIP4-208ENST00000456385 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
CLIP4-208ENST00000456385 MORC2Q9Y6X9 1032 aaPredicted RBP12.28□□□□□ -0.44
CLIP4-208ENST00000456385 EDC4Q6P2E9 1401 aaKnown RBP12.28□□□□□ -0.44
CLIP4-208ENST00000456385 GNAI3P08754 354 aa12.27□□□□□ -0.44
CLIP4-208ENST00000456385 TAF3Q5VWG9 929 aa12.27□□□□□ -0.44
CLIP4-208ENST00000456385 SLC52A1Q9NWF4 448 aa12.27□□□□□ -0.44
CLIP4-208ENST00000456385 DACT1Q9NYF0 836 aa12.27□□□□□ -0.44
CLIP4-208ENST00000456385 CRB1P82279 1406 aa12.27□□□□□ -0.44
CLIP4-208ENST00000456385 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.45
CLIP4-208ENST00000456385 ZNF75DP51815 510 aa12.27□□□□□ -0.45
CLIP4-208ENST00000456385 FLIIQ13045 1269 aa12.27□□□□□ -0.45
CLIP4-208ENST00000456385 TERF2Q15554 542 aa12.27□□□□□ -0.45
CLIP4-208ENST00000456385 PLA2G4DQ86XP0 818 aa12.27□□□□□ -0.45
CLIP4-208ENST00000456385 CPS1P31327 1500 aa12.26□□□□□ -0.45
CLIP4-208ENST00000456385 USP27XA6NNY8 438 aa12.26□□□□□ -0.45
CLIP4-208ENST00000456385 VGLL3A8MV65 326 aa12.26□□□□□ -0.45
CLIP4-208ENST00000456385 EPB41L2O43491 1005 aaKnown RBP12.26□□□□□ -0.45
CLIP4-208ENST00000456385 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
CLIP4-208ENST00000456385 COL9A3Q14050 684 aaPredicted RBP12.26□□□□□ -0.45
CLIP4-208ENST00000456385 ARID5BQ14865 1188 aa12.26□□□□□ -0.45
CLIP4-208ENST00000456385 ME3Q16798 604 aa12.26□□□□□ -0.45
CLIP4-208ENST00000456385 KMT5BQ4FZB7 885 aa12.26□□□□□ -0.45
CLIP4-208ENST00000456385 CDC37L1Q7L3B6 337 aa12.26□□□□□ -0.45
CLIP4-208ENST00000456385 TNMDQ9H2S6 317 aa12.26□□□□□ -0.45
CLIP4-208ENST00000456385 PAXBP1Q9Y5B6 917 aa12.26□□□□□ -0.45
CLIP4-208ENST00000456385 PTH1RQ03431 593 aa12.26□□□□□ -0.45
CLIP4-208ENST00000456385 JAKMIP1Q96N16 626 aaKnown RBP12.26□□□□□ -0.45
CLIP4-208ENST00000456385 PDRG1Q9NUG6 133 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms