RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 CEP350Q5VT06 3117 aa29.18■■■□□ 2.26
SEC22C-213ENST00000456222 CEMIPQ8WUJ3 1361 aa29.18■■■□□ 2.26
SEC22C-213ENST00000456222 TM4SF1P30408 202 aa29.18■■■□□ 2.26
SEC22C-213ENST00000456222 TEFQ10587 303 aa29.18■■■□□ 2.26
SEC22C-213ENST00000456222 BCS1LQ9Y276 419 aa29.18■■■□□ 2.26
SEC22C-213ENST00000456222 AFDNP55196 1824 aaKnown RBP29.17■■■□□ 2.26
SEC22C-213ENST00000456222 POLRMTO00411 1230 aaKnown RBP29.17■■■□□ 2.26
SEC22C-213ENST00000456222 ZPR1O75312 459 aa29.16■■■□□ 2.26
SEC22C-213ENST00000456222 ZNF790Q6PG37 636 aa29.16■■■□□ 2.26
SEC22C-213ENST00000456222 TTC5Q8N0Z6 440 aa29.16■■■□□ 2.26
SEC22C-213ENST00000456222 BCL2L12Q9HB09 334 aa29.16■■■□□ 2.26
SEC22C-213ENST00000456222 KCNQ3O43525 872 aa29.15■■■□□ 2.26
SEC22C-213ENST00000456222 U2AF1L5P0DN76 240 aaPredicted RBP29.15■■■□□ 2.26
SEC22C-213ENST00000456222 CANXP27824 592 aaKnown RBP29.15■■■□□ 2.26
SEC22C-213ENST00000456222 U2AF1Q01081 240 aaKnown RBP eCLIP29.15■■■□□ 2.26
SEC22C-213ENST00000456222 ZNF526Q8TF50 670 aaPredicted RBP29.15■■■□□ 2.26
SEC22C-213ENST00000456222 NARFQ9UHQ1 456 aa29.15■■■□□ 2.26
SEC22C-213ENST00000456222 HEG1Q9ULI3 1381 aa29.14■■■□□ 2.26
SEC22C-213ENST00000456222 NFIXQ14938 502 aa29.13■■■□□ 2.25
SEC22C-213ENST00000456222 NUDCQ9Y266 331 aa29.13■■■□□ 2.25
SEC22C-213ENST00000456222 ARFGEF1Q9Y6D6 1849 aa29.13■■■□□ 2.25
SEC22C-213ENST00000456222 NRXN2Q9P2S2 1712 aa29.11■■■□□ 2.25
SEC22C-213ENST00000456222 FCHSD2O94868 740 aa29.11■■■□□ 2.25
SEC22C-213ENST00000456222 CHRNA5P30532 468 aa29.11■■■□□ 2.25
SEC22C-213ENST00000456222 EIF5P55010 431 aaKnown RBP29.11■■■□□ 2.25
SEC22C-213ENST00000456222 SENP3-EIF4A1A0A087X0R7 540 aa29.1■■■□□ 2.25
SEC22C-213ENST00000456222 STARD3NLO95772 234 aa29.09■■■□□ 2.25
SEC22C-213ENST00000456222 GPBP1L1Q9HC44 474 aaPredicted RBP29.09■■■□□ 2.25
SEC22C-213ENST00000456222 ARHGAP27Q6ZUM4 889 aa29.08■■■□□ 2.25
SEC22C-213ENST00000456222 MCM10Q7L590 875 aa29.08■■■□□ 2.25
SEC22C-213ENST00000456222 DCTN1Q14203 1278 aa29.07■■■□□ 2.24
SEC22C-213ENST00000456222 SCN7AQ01118 1682 aa29.06■■■□□ 2.24
SEC22C-213ENST00000456222 BTBD11A6QL63 1104 aa29.06■■■□□ 2.24
SEC22C-213ENST00000456222 FMNL2Q96PY5 1086 aa29.06■■■□□ 2.24
SEC22C-213ENST00000456222 PIM2Q9P1W9 311 aa29.06■■■□□ 2.24
SEC22C-213ENST00000456222 A1BGP04217 495 aa29.05■■■□□ 2.24
SEC22C-213ENST00000456222 PRAMEF22A3QJZ6 481 aa29.04■■■□□ 2.24
SEC22C-213ENST00000456222 DLG5Q8TDM6 1919 aa29.04■■■□□ 2.24
SEC22C-213ENST00000456222 CARMIL3Q8ND23 1372 aa29.03■■■□□ 2.24
SEC22C-213ENST00000456222 SERPINB2P05120 415 aa29.03■■■□□ 2.24
SEC22C-213ENST00000456222 ZNF330Q9Y3S2 320 aaPredicted RBP29.03■■■□□ 2.24
SEC22C-213ENST00000456222 DALRD3Q5D0E6 543 aaKnown RBP29.02■■■□□ 2.24
SEC22C-213ENST00000456222 BICDL1Q6ZP65 573 aa29.02■■■□□ 2.24
SEC22C-213ENST00000456222 TEX13AQ9BXU3 409 aaPredicted RBP29.02■■■□□ 2.24
SEC22C-213ENST00000456222 TBC1D2BQ9UPU7 963 aa29.02■■■□□ 2.24
SEC22C-213ENST00000456222 DLEC1Q9Y238 1755 aa29.01■■■□□ 2.23
SEC22C-213ENST00000456222 ANKRD31Q8N7Z5 1873 aa29■■■□□ 2.23
SEC22C-213ENST00000456222 PIP4K2AP48426 406 aaPredicted RBP29■■■□□ 2.23
SEC22C-213ENST00000456222 TBC1D9BQ66K14 1250 aa29■■■□□ 2.23
SEC22C-213ENST00000456222 RTF1Q92541 710 aaKnown RBP29■■■□□ 2.23
SEC22C-213ENST00000456222 USP16Q9Y5T5 823 aa29■■■□□ 2.23
SEC22C-213ENST00000456222 IL6STP40189 918 aaPredicted RBP28.99■■■□□ 2.23
SEC22C-213ENST00000456222 A0A087WZG4 1122 aa28.98■■■□□ 2.23
SEC22C-213ENST00000456222 SBF1O95248 1867 aa28.97■■■□□ 2.23
SEC22C-213ENST00000456222 KIF3CO14782 793 aa28.97■■■□□ 2.23
SEC22C-213ENST00000456222 BCORQ6W2J9 1755 aa28.97■■■□□ 2.23
SEC22C-213ENST00000456222 CAMTA2O94983 1202 aa28.95■■■□□ 2.22
SEC22C-213ENST00000456222 C9orf131Q5VYM1 1079 aa28.95■■■□□ 2.22
SEC22C-213ENST00000456222 PLEKHF1Q96S99 279 aa28.95■■■□□ 2.22
SEC22C-213ENST00000456222 HTATSF1O43719 755 aaKnown RBP28.94■■■□□ 2.22
SEC22C-213ENST00000456222 CCDC24Q8N4L8 307 aa28.94■■■□□ 2.22
SEC22C-213ENST00000456222 MIS18AQ9NYP9 233 aa28.94■■■□□ 2.22
SEC22C-213ENST00000456222 COL11A2P13942 1736 aaPredicted RBP28.93■■■□□ 2.22
SEC22C-213ENST00000456222 C2CD5Q86YS7 1000 aa28.92■■■□□ 2.22
SEC22C-213ENST00000456222 SNRPA1P09661 255 aaKnown RBP28.91■■■□□ 2.22
SEC22C-213ENST00000456222 KDM3BQ7LBC6 1761 aa28.9■■■□□ 2.22
SEC22C-213ENST00000456222 NBPF26B4DH59 902 aa28.9■■■□□ 2.22
SEC22C-213ENST00000456222 PRR5LQ6MZQ0 368 aa28.9■■■□□ 2.22
SEC22C-213ENST00000456222 NBPF10Q6P3W6 841 aaKnown RBP28.9■■■□□ 2.22
SEC22C-213ENST00000456222 DZIP3Q86Y13 1208 aaKnown RBP28.9■■■□□ 2.22
SEC22C-213ENST00000456222 NBPF15Q8N660 670 aa28.9■■■□□ 2.22
SEC22C-213ENST00000456222 RASSF7Q02833 373 aa28.89■■■□□ 2.22
SEC22C-213ENST00000456222 TAF7Q15545 349 aaPredicted RBP28.89■■■□□ 2.22
SEC22C-213ENST00000456222 THUMPD2Q9BTF0 503 aaKnown RBP28.89■■■□□ 2.22
SEC22C-213ENST00000456222 NMRK2Q9NPI5 230 aa28.89■■■□□ 2.22
SEC22C-213ENST00000456222 RNF181Q9P0P0 153 aa28.88■■■□□ 2.21
SEC22C-213ENST00000456222 PRELPP51888 382 aa28.87■■■□□ 2.21
SEC22C-213ENST00000456222 LAMB4A4D0S4 1761 aa28.87■■■□□ 2.21
SEC22C-213ENST00000456222 H0YIN7 160 aa28.86■■■□□ 2.21
SEC22C-213ENST00000456222 NFE2L2Q16236 605 aa28.86■■■□□ 2.21
SEC22C-213ENST00000456222 TTLL6Q8N841 843 aa28.86■■■□□ 2.21
SEC22C-213ENST00000456222 CCDC88AQ3V6T2 1871 aa28.85■■■□□ 2.21
SEC22C-213ENST00000456222 NPM2Q86SE8 214 aaKnown RBP28.84■■■□□ 2.21
SEC22C-213ENST00000456222 SETDB2Q96T68 719 aa28.84■■■□□ 2.21
SEC22C-213ENST00000456222 BRIP1Q9BX63 1249 aa28.84■■■□□ 2.21
SEC22C-213ENST00000456222 DDX10Q13206 875 aaKnown RBP28.83■■■□□ 2.21
SEC22C-213ENST00000456222 CACNA1SQ13698 1873 aa28.82■■■□□ 2.2
SEC22C-213ENST00000456222 NEFMP07197 916 aa28.81■■■□□ 2.2
SEC22C-213ENST00000456222 HSPA6P17066 643 aa28.81■■■□□ 2.2
SEC22C-213ENST00000456222 CNBD1Q8NA66 436 aa28.81■■■□□ 2.2
SEC22C-213ENST00000456222 NFKBIEO00221 500 aa28.8■■■□□ 2.2
SEC22C-213ENST00000456222 ZNF622Q969S3 477 aaKnown RBP eCLIP28.8■■■□□ 2.2
SEC22C-213ENST00000456222 SLX4Q8IY92 1834 aa28.79■■■□□ 2.2
SEC22C-213ENST00000456222 RALBP1Q15311 655 aa28.79■■■□□ 2.2
SEC22C-213ENST00000456222 MAPK8IP3Q9UPT6 1336 aa28.78■■■□□ 2.2
SEC22C-213ENST00000456222 PDE6BP35913 854 aa28.78■■■□□ 2.2
SEC22C-213ENST00000456222 EIF4A1P60842 406 aaKnown RBP28.78■■■□□ 2.2
SEC22C-213ENST00000456222 CLEC4GQ6UXB4 293 aa28.77■■■□□ 2.2
SEC22C-213ENST00000456222 ZNF219Q9P2Y4 722 aaPredicted RBP28.77■■■□□ 2.2
SEC22C-213ENST00000456222 FER1L6Q2WGJ9 1857 aa28.76■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms