RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 LGR6Q9HBX8 967 aa24.57■■□□□ 1.52
CSPG5-203ENST00000456150 ZNF530Q6P9A1 599 aaPredicted RBP24.56■■□□□ 1.52
CSPG5-203ENST00000456150 LTBP4Q8N2S1 1624 aa24.56■■□□□ 1.52
CSPG5-203ENST00000456150 EIF2S2P20042 333 aaKnown RBP24.55■■□□□ 1.52
CSPG5-203ENST00000456150 MCCP23508 829 aa24.55■■□□□ 1.52
CSPG5-203ENST00000456150 OVOS2A0A0G2JMS6 1433 aa24.55■■□□□ 1.52
CSPG5-203ENST00000456150 TNS3Q68CZ2 1445 aa24.55■■□□□ 1.52
CSPG5-203ENST00000456150 AK9Q5TCS8 1911 aa24.54■■□□□ 1.52
CSPG5-203ENST00000456150 TSHZ3Q63HK5 1081 aa24.54■■□□□ 1.52
CSPG5-203ENST00000456150 SPATA31A3Q5VYP0 1347 aa24.54■■□□□ 1.52
CSPG5-203ENST00000456150 CABLES1Q8TDN4 633 aa24.54■■□□□ 1.52
CSPG5-203ENST00000456150 ARXQ96QS3 562 aa24.54■■□□□ 1.52
CSPG5-203ENST00000456150 BTBD11A6QL63 1104 aa24.53■■□□□ 1.52
CSPG5-203ENST00000456150 TRIM6-TRIM34B2RNG4 842 aa24.53■■□□□ 1.52
CSPG5-203ENST00000456150 POLA2Q14181 598 aa24.53■■□□□ 1.52
CSPG5-203ENST00000456150 ARHGEF25Q86VW2 580 aa24.53■■□□□ 1.52
CSPG5-203ENST00000456150 DNAAF4Q8WXU2 420 aa24.53■■□□□ 1.52
CSPG5-203ENST00000456150 CHPF2Q9P2E5 772 aa24.53■■□□□ 1.52
CSPG5-203ENST00000456150 BAG4O95429 457 aaKnown RBP24.52■■□□□ 1.52
CSPG5-203ENST00000456150 CHMLP26374 656 aa24.52■■□□□ 1.52
CSPG5-203ENST00000456150 RILPL2Q969X0 211 aa24.52■■□□□ 1.52
CSPG5-203ENST00000456150 LRRC59Q96AG4 307 aaKnown RBP24.52■■□□□ 1.52
CSPG5-203ENST00000456150 C1orf141Q5JVX7 400 aa24.52■■□□□ 1.52
CSPG5-203ENST00000456150 PPP1R42Q7Z4L9 355 aa24.52■■□□□ 1.52
CSPG5-203ENST00000456150 CAMTA1Q9Y6Y1 1673 aa24.51■■□□□ 1.51
CSPG5-203ENST00000456150 CYP2E1P05181 493 aaPredicted RBP24.51■■□□□ 1.51
CSPG5-203ENST00000456150 MCM2P49736 904 aa24.51■■□□□ 1.51
CSPG5-203ENST00000456150 ANAPC15P60006 121 aa24.51■■□□□ 1.51
CSPG5-203ENST00000456150 GRPEL1Q9HAV7 217 aa24.5■■□□□ 1.51
CSPG5-203ENST00000456150 EPB41L2O43491 1005 aaKnown RBP24.5■■□□□ 1.51
CSPG5-203ENST00000456150 ZC3H6P61129 1189 aaKnown RBP24.5■■□□□ 1.51
CSPG5-203ENST00000456150 BEND3Q5T5X7 828 aa24.5■■□□□ 1.51
CSPG5-203ENST00000456150 RNMTO43148 476 aaKnown RBP24.49■■□□□ 1.51
CSPG5-203ENST00000456150 SURF6O75683 361 aaKnown RBP24.49■■□□□ 1.51
CSPG5-203ENST00000456150 SOS2Q07890 1332 aaPredicted RBP24.49■■□□□ 1.51
CSPG5-203ENST00000456150 PI4KAP2A4QPH2 592 aa24.49■■□□□ 1.51
CSPG5-203ENST00000456150 MPRIPQ6WCQ1 1025 aa24.49■■□□□ 1.51
CSPG5-203ENST00000456150 PI4KAP1Q8N8J0 262 aa24.49■■□□□ 1.51
CSPG5-203ENST00000456150 HSP90AB4PQ58FF6 505 aa24.48■■□□□ 1.51
CSPG5-203ENST00000456150 KIF1BPQ96EK5 621 aa24.48■■□□□ 1.51
CSPG5-203ENST00000456150 DBF4Q9UBU7 674 aaPredicted RBP24.48■■□□□ 1.51
CSPG5-203ENST00000456150 SRGAP3O43295 1099 aa24.47■■□□□ 1.51
CSPG5-203ENST00000456150 KCNQ3O43525 872 aa24.47■■□□□ 1.51
CSPG5-203ENST00000456150 IL1RAPL2Q9NP60 686 aa24.47■■□□□ 1.51
CSPG5-203ENST00000456150 NEK4P51957 841 aa24.47■■□□□ 1.51
CSPG5-203ENST00000456150 KLHL40Q2TBA0 621 aa24.47■■□□□ 1.51
CSPG5-203ENST00000456150 RHPN1Q8TCX5 695 aa24.47■■□□□ 1.51
CSPG5-203ENST00000456150 ANKRD24Q8TF21 1146 aa24.47■■□□□ 1.51
CSPG5-203ENST00000456150 ANO2Q9NQ90 1003 aa24.47■■□□□ 1.51
CSPG5-203ENST00000456150 AXIN2Q9Y2T1 843 aa24.47■■□□□ 1.51
CSPG5-203ENST00000456150 NBPF7P0C2Y1 421 aaPredicted RBP24.46■■□□□ 1.51
CSPG5-203ENST00000456150 IL17RAQ96F46 866 aa24.46■■□□□ 1.51
CSPG5-203ENST00000456150 PANK2Q9BZ23 570 aa24.46■■□□□ 1.51
CSPG5-203ENST00000456150 ADCY9O60503 1353 aa24.45■■□□□ 1.51
CSPG5-203ENST00000456150 CRYBG1Q9Y4K1 1723 aa24.45■■□□□ 1.5
CSPG5-203ENST00000456150 SIPA1L3O60292 1781 aaPredicted RBP24.45■■□□□ 1.5
CSPG5-203ENST00000456150 NHSL1Q5SYE7 1610 aa24.44■■□□□ 1.5
CSPG5-203ENST00000456150 DDX49Q9Y6V7 483 aaKnown RBP24.44■■□□□ 1.5
CSPG5-203ENST00000456150 NUTM1Q86Y26 1132 aa24.44■■□□□ 1.5
CSPG5-203ENST00000456150 ZGPATQ8N5A5 531 aaKnown RBP24.44■■□□□ 1.5
CSPG5-203ENST00000456150 HDAC5Q9UQL6 1122 aa24.44■■□□□ 1.5
CSPG5-203ENST00000456150 UNC5CLQ8IV45 518 aa24.43■■□□□ 1.5
CSPG5-203ENST00000456150 ALDH1L1O75891 902 aa24.42■■□□□ 1.5
CSPG5-203ENST00000456150 HEG1Q9ULI3 1381 aa24.42■■□□□ 1.5
CSPG5-203ENST00000456150 MCTP1Q6DN14 999 aa24.42■■□□□ 1.5
CSPG5-203ENST00000456150 TMX3Q96JJ7 454 aa24.42■■□□□ 1.5
CSPG5-203ENST00000456150 ADAMTS7Q9UKP4 1686 aa24.42■■□□□ 1.5
CSPG5-203ENST00000456150 GIGYF1O75420 1035 aaPredicted RBP24.41■■□□□ 1.5
CSPG5-203ENST00000456150 MTX1Q13505 466 aa24.41■■□□□ 1.5
CSPG5-203ENST00000456150 PI4K2BQ8TCG2 481 aa24.41■■□□□ 1.5
CSPG5-203ENST00000456150 RGPD5Q99666 1765 aa24.41■■□□□ 1.5
CSPG5-203ENST00000456150 ROBO1Q9Y6N7 1651 aa24.4■■□□□ 1.5
CSPG5-203ENST00000456150 ANXA1P04083 346 aa24.4■■□□□ 1.5
CSPG5-203ENST00000456150 CNTROBQ8N137 903 aa24.4■■□□□ 1.5
CSPG5-203ENST00000456150 PALD1Q9ULE6 856 aa24.4■■□□□ 1.5
CSPG5-203ENST00000456150 PKP1Q13835 747 aa24.39■■□□□ 1.5
CSPG5-203ENST00000456150 USP42Q9H9J4 1324 aaKnown RBP24.39■■□□□ 1.49
CSPG5-203ENST00000456150 CUL4AQ13619 759 aa24.39■■□□□ 1.49
CSPG5-203ENST00000456150 CHRNA2Q15822 529 aa24.39■■□□□ 1.49
CSPG5-203ENST00000456150 KSR2Q6VAB6 950 aa24.39■■□□□ 1.49
CSPG5-203ENST00000456150 GAS2L3Q86XJ1 694 aa24.38■■□□□ 1.49
CSPG5-203ENST00000456150 INTS4Q96HW7 963 aaKnown RBP24.38■■□□□ 1.49
CSPG5-203ENST00000456150 HYPKQ9NX55 129 aa24.38■■□□□ 1.49
CSPG5-203ENST00000456150 MAP3K2Q9Y2U5 619 aa24.38■■□□□ 1.49
CSPG5-203ENST00000456150 TTC41PQ6P2S7 1318 aa24.38■■□□□ 1.49
CSPG5-203ENST00000456150 LMBRD1Q9NUN5 540 aa24.38■■□□□ 1.49
CSPG5-203ENST00000456150 OS9Q13438 667 aaPredicted RBP24.37■■□□□ 1.49
CSPG5-203ENST00000456150 C9orf78Q9NZ63 289 aaPredicted RBP24.37■■□□□ 1.49
CSPG5-203ENST00000456150 COL18A1P39060 1754 aa24.36■■□□□ 1.49
CSPG5-203ENST00000456150 HSPA4P34932 840 aa24.36■■□□□ 1.49
CSPG5-203ENST00000456150 ZDHHC9Q9Y397 364 aa24.36■■□□□ 1.49
CSPG5-203ENST00000456150 ERC1Q8IUD2 1116 aa24.35■■□□□ 1.49
CSPG5-203ENST00000456150 SGSM2O43147 1006 aa24.34■■□□□ 1.49
CSPG5-203ENST00000456150 GLRX3O76003 335 aaKnown RBP24.34■■□□□ 1.49
CSPG5-203ENST00000456150 DDX58O95786 925 aaKnown RBP24.34■■□□□ 1.49
CSPG5-203ENST00000456150 ERBB3P21860 1342 aa24.34■■□□□ 1.49
CSPG5-203ENST00000456150 CLASRPQ8N2M8 674 aaKnown RBP24.34■■□□□ 1.49
CSPG5-203ENST00000456150 RAD50Q92878 1312 aa24.34■■□□□ 1.49
CSPG5-203ENST00000456150 PROSER3Q2NL68 480 aa24.33■■□□□ 1.49
CSPG5-203ENST00000456150 MAP4K4O95819 1239 aaPredicted RBP24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms