RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 COL15A1P39059 1388 aa16.59■□□□□ 0.25
SMCR2-201ENST00000456090 DDR1Q08345 913 aa16.58■□□□□ 0.24
SMCR2-201ENST00000456090 USPL1Q5W0Q7 1092 aa16.58■□□□□ 0.24
SMCR2-201ENST00000456090 CEMIPQ8WUJ3 1361 aa16.58■□□□□ 0.24
SMCR2-201ENST00000456090 CEP350Q5VT06 3117 aa16.57■□□□□ 0.24
SMCR2-201ENST00000456090 ATP10DQ9P241 1426 aa16.57■□□□□ 0.24
SMCR2-201ENST00000456090 GIGYF1O75420 1035 aaPredicted RBP16.57■□□□□ 0.24
SMCR2-201ENST00000456090 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
SMCR2-201ENST00000456090 NRXN2Q9P2S2 1712 aa16.56■□□□□ 0.24
SMCR2-201ENST00000456090 HEG1Q9ULI3 1381 aa16.56■□□□□ 0.24
SMCR2-201ENST00000456090 STARD3NLO95772 234 aa16.56■□□□□ 0.24
SMCR2-201ENST00000456090 DPEP1P16444 411 aa16.56■□□□□ 0.24
SMCR2-201ENST00000456090 CANXP27824 592 aaKnown RBP16.56■□□□□ 0.24
SMCR2-201ENST00000456090 C1QTNF8P60827 252 aa16.56■□□□□ 0.24
SMCR2-201ENST00000456090 NARFQ9UHQ1 456 aa16.56■□□□□ 0.24
SMCR2-201ENST00000456090 BCS1LQ9Y276 419 aa16.56■□□□□ 0.24
SMCR2-201ENST00000456090 ADCY9O60503 1353 aa16.55■□□□□ 0.24
SMCR2-201ENST00000456090 POLRMTO00411 1230 aaKnown RBP16.55■□□□□ 0.24
SMCR2-201ENST00000456090 FCHSD2O94868 740 aa16.55■□□□□ 0.24
SMCR2-201ENST00000456090 TM4SF1P30408 202 aa16.55■□□□□ 0.24
SMCR2-201ENST00000456090 SCN7AQ01118 1682 aa16.55■□□□□ 0.24
SMCR2-201ENST00000456090 BTBD11A6QL63 1104 aa16.54■□□□□ 0.24
SMCR2-201ENST00000456090 FMNL2Q96PY5 1086 aa16.54■□□□□ 0.24
SMCR2-201ENST00000456090 DLEC1Q9Y238 1755 aa16.54■□□□□ 0.24
SMCR2-201ENST00000456090 KCNA3P22001 575 aa16.53■□□□□ 0.24
SMCR2-201ENST00000456090 MCM10Q7L590 875 aa16.53■□□□□ 0.24
SMCR2-201ENST00000456090 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
SMCR2-201ENST00000456090 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
SMCR2-201ENST00000456090 SBF1O95248 1867 aa16.52■□□□□ 0.24
SMCR2-201ENST00000456090 BCORQ6W2J9 1755 aa16.52■□□□□ 0.24
SMCR2-201ENST00000456090 KCNQ3O43525 872 aa16.52■□□□□ 0.24
SMCR2-201ENST00000456090 EIF5P55010 431 aaKnown RBP16.52■□□□□ 0.24
SMCR2-201ENST00000456090 NFIXQ14938 502 aa16.52■□□□□ 0.24
SMCR2-201ENST00000456090 BCL2L12Q9HB09 334 aa16.52■□□□□ 0.24
SMCR2-201ENST00000456090 ZNF526Q8TF50 670 aaPredicted RBP16.51■□□□□ 0.23
SMCR2-201ENST00000456090 GPBP1L1Q9HC44 474 aaPredicted RBP16.51■□□□□ 0.23
SMCR2-201ENST00000456090 PIM2Q9P1W9 311 aa16.51■□□□□ 0.23
SMCR2-201ENST00000456090 ZNF330Q9Y3S2 320 aaPredicted RBP16.51■□□□□ 0.23
SMCR2-201ENST00000456090 A0A087WZG4 1122 aa16.5■□□□□ 0.23
SMCR2-201ENST00000456090 CHRNA5P30532 468 aa16.5■□□□□ 0.23
SMCR2-201ENST00000456090 DCTN1Q14203 1278 aa16.5■□□□□ 0.23
SMCR2-201ENST00000456090 ARHGAP27Q6ZUM4 889 aa16.5■□□□□ 0.23
SMCR2-201ENST00000456090 CCDC88AQ3V6T2 1871 aa16.5■□□□□ 0.23
SMCR2-201ENST00000456090 ANKRD31Q8N7Z5 1873 aa16.5■□□□□ 0.23
SMCR2-201ENST00000456090 A1BGP04217 495 aa16.49■□□□□ 0.23
SMCR2-201ENST00000456090 DALRD3Q5D0E6 543 aaKnown RBP16.49■□□□□ 0.23
SMCR2-201ENST00000456090 LAMB4A4D0S4 1761 aa16.49■□□□□ 0.23
SMCR2-201ENST00000456090 SENP3-EIF4A1A0A087X0R7 540 aa16.48■□□□□ 0.23
SMCR2-201ENST00000456090 HTATSF1O43719 755 aaKnown RBP16.48■□□□□ 0.23
SMCR2-201ENST00000456090 SERPINB2P05120 415 aa16.48■□□□□ 0.23
SMCR2-201ENST00000456090 NEFMP07197 916 aa16.48■□□□□ 0.23
SMCR2-201ENST00000456090 IL6STP40189 918 aaPredicted RBP16.48■□□□□ 0.23
SMCR2-201ENST00000456090 BICDL1Q6ZP65 573 aa16.48■□□□□ 0.23
SMCR2-201ENST00000456090 TBC1D2BQ9UPU7 963 aa16.48■□□□□ 0.23
SMCR2-201ENST00000456090 KDM3BQ7LBC6 1761 aa16.48■□□□□ 0.23
SMCR2-201ENST00000456090 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
SMCR2-201ENST00000456090 NPM2Q86SE8 214 aaKnown RBP16.47■□□□□ 0.23
SMCR2-201ENST00000456090 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
SMCR2-201ENST00000456090 PRAMEF22A3QJZ6 481 aa16.46■□□□□ 0.23
SMCR2-201ENST00000456090 TBC1D9BQ66K14 1250 aa16.46■□□□□ 0.23
SMCR2-201ENST00000456090 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
SMCR2-201ENST00000456090 SNRPA1P09661 255 aaKnown RBP16.45■□□□□ 0.22
SMCR2-201ENST00000456090 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
SMCR2-201ENST00000456090 TAF7Q15545 349 aaPredicted RBP16.45■□□□□ 0.22
SMCR2-201ENST00000456090 PLEKHF1Q96S99 279 aa16.45■□□□□ 0.22
SMCR2-201ENST00000456090 CARMIL3Q8ND23 1372 aa16.45■□□□□ 0.22
SMCR2-201ENST00000456090 MIS18AQ9NYP9 233 aa16.44■□□□□ 0.22
SMCR2-201ENST00000456090 CAMTA2O94983 1202 aa16.43■□□□□ 0.22
SMCR2-201ENST00000456090 RALBP1Q15311 655 aa16.43■□□□□ 0.22
SMCR2-201ENST00000456090 DDX10Q13206 875 aaKnown RBP16.42■□□□□ 0.22
SMCR2-201ENST00000456090 C9orf131Q5VYM1 1079 aa16.42■□□□□ 0.22
SMCR2-201ENST00000456090 DZIP3Q86Y13 1208 aaKnown RBP16.42■□□□□ 0.22
SMCR2-201ENST00000456090 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
SMCR2-201ENST00000456090 MAPK8IP3Q9UPT6 1336 aa16.42■□□□□ 0.22
SMCR2-201ENST00000456090 NUP98P52948 1817 aa16.41■□□□□ 0.22
SMCR2-201ENST00000456090 NFE2L2Q16236 605 aa16.41■□□□□ 0.22
SMCR2-201ENST00000456090 C2CD5Q86YS7 1000 aa16.41■□□□□ 0.22
SMCR2-201ENST00000456090 SETDB2Q96T68 719 aa16.41■□□□□ 0.22
SMCR2-201ENST00000456090 H0YIN7 160 aa16.4■□□□□ 0.22
SMCR2-201ENST00000456090 PRR5LQ6MZQ0 368 aa16.4■□□□□ 0.22
SMCR2-201ENST00000456090 CCDC24Q8N4L8 307 aa16.4■□□□□ 0.22
SMCR2-201ENST00000456090 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
SMCR2-201ENST00000456090 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
SMCR2-201ENST00000456090 FER1L6Q2WGJ9 1857 aa16.39■□□□□ 0.22
SMCR2-201ENST00000456090 ARFGEF2Q9Y6D5 1785 aa16.39■□□□□ 0.21
SMCR2-201ENST00000456090 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
SMCR2-201ENST00000456090 KIF3CO14782 793 aa16.39■□□□□ 0.21
SMCR2-201ENST00000456090 NPHP1O15259 732 aa16.39■□□□□ 0.21
SMCR2-201ENST00000456090 NBPF10Q6P3W6 841 aaKnown RBP16.39■□□□□ 0.21
SMCR2-201ENST00000456090 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
SMCR2-201ENST00000456090 RNF181Q9P0P0 153 aa16.39■□□□□ 0.21
SMCR2-201ENST00000456090 TIAM2Q8IVF5 1701 aa16.39■□□□□ 0.21
SMCR2-201ENST00000456090 DICER1Q9UPY3 1922 aaKnown RBP16.39■□□□□ 0.21
SMCR2-201ENST00000456090 SLX4Q8IY92 1834 aa16.38■□□□□ 0.21
SMCR2-201ENST00000456090 PDE6BP35913 854 aa16.38■□□□□ 0.21
SMCR2-201ENST00000456090 CNBD1Q8NA66 436 aa16.38■□□□□ 0.21
SMCR2-201ENST00000456090 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
SMCR2-201ENST00000456090 BRIP1Q9BX63 1249 aa16.38■□□□□ 0.21
SMCR2-201ENST00000456090 TNRC6CQ9HCJ0 1690 aaKnown RBP16.37■□□□□ 0.21
SMCR2-201ENST00000456090 RASSF7Q02833 373 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms