RNA–Protein interactions for RNA: ENST00000455830.2

CRAT-206, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-206ENST00000455830 ARHGAP27Q6ZUM4 889 aa28.5■■■□□ 2.15
CRAT-206ENST00000455830 CEP350Q5VT06 3117 aa28.49■■■□□ 2.15
CRAT-206ENST00000455830 GAS2L2Q8NHY3 880 aa28.48■■■□□ 2.15
CRAT-206ENST00000455830 NARFQ9UHQ1 456 aa28.48■■■□□ 2.15
CRAT-206ENST00000455830 AFDNP55196 1824 aaKnown RBP28.48■■■□□ 2.15
CRAT-206ENST00000455830 IL17REQ8NFR9 667 aa28.47■■■□□ 2.15
CRAT-206ENST00000455830 PIM2Q9P1W9 311 aa28.47■■■□□ 2.15
CRAT-206ENST00000455830 GNAT3A8MTJ3 354 aa28.46■■■□□ 2.15
CRAT-206ENST00000455830 TTC5Q8N0Z6 440 aa28.46■■■□□ 2.15
CRAT-206ENST00000455830 KIF3CO14782 793 aa28.45■■■□□ 2.14
CRAT-206ENST00000455830 CHRNA5P30532 468 aa28.45■■■□□ 2.14
CRAT-206ENST00000455830 NRXN2Q9P2S2 1712 aa28.45■■■□□ 2.14
CRAT-206ENST00000455830 TEFQ10587 303 aa28.44■■■□□ 2.14
CRAT-206ENST00000455830 NFIXQ14938 502 aa28.44■■■□□ 2.14
CRAT-206ENST00000455830 BCL2L12Q9HB09 334 aa28.44■■■□□ 2.14
CRAT-206ENST00000455830 CANXP27824 592 aaKnown RBP28.43■■■□□ 2.14
CRAT-206ENST00000455830 DALRD3Q5D0E6 543 aaKnown RBP28.43■■■□□ 2.14
CRAT-206ENST00000455830 ZNF496Q96IT1 587 aaPredicted RBP28.43■■■□□ 2.14
CRAT-206ENST00000455830 HEG1Q9ULI3 1381 aa28.41■■■□□ 2.14
CRAT-206ENST00000455830 ZNF790Q6PG37 636 aa28.41■■■□□ 2.14
CRAT-206ENST00000455830 PHACTR3Q96KR7 559 aa28.41■■■□□ 2.14
CRAT-206ENST00000455830 RSPH6AQ9H0K4 717 aa28.41■■■□□ 2.14
CRAT-206ENST00000455830 CEMIPQ8WUJ3 1361 aa28.4■■■□□ 2.14
CRAT-206ENST00000455830 STARD3NLO95772 234 aa28.4■■■□□ 2.14
CRAT-206ENST00000455830 PRKAR2BP31323 418 aa28.4■■■□□ 2.14
CRAT-206ENST00000455830 CFAP53Q96M91 514 aa28.4■■■□□ 2.14
CRAT-206ENST00000455830 EIF5P55010 431 aaKnown RBP28.39■■■□□ 2.14
CRAT-206ENST00000455830 HSPA6P17066 643 aa28.38■■■□□ 2.13
CRAT-206ENST00000455830 C9orf131Q5VYM1 1079 aa28.38■■■□□ 2.13
CRAT-206ENST00000455830 DLEC1Q9Y238 1755 aa28.37■■■□□ 2.13
CRAT-206ENST00000455830 SERPINB2P05120 415 aa28.37■■■□□ 2.13
CRAT-206ENST00000455830 SCN7AQ01118 1682 aa28.37■■■□□ 2.13
CRAT-206ENST00000455830 PPP2R1AP30153 589 aa28.35■■■□□ 2.13
CRAT-206ENST00000455830 A0A087WZG4 1122 aa28.34■■■□□ 2.13
CRAT-206ENST00000455830 FMNL2Q96PY5 1086 aa28.34■■■□□ 2.13
CRAT-206ENST00000455830 TEX13AQ9BXU3 409 aaPredicted RBP28.34■■■□□ 2.13
CRAT-206ENST00000455830 NUDCQ9Y266 331 aa28.34■■■□□ 2.13
CRAT-206ENST00000455830 CARMIL3Q8ND23 1372 aa28.34■■■□□ 2.13
CRAT-206ENST00000455830 SBF1O95248 1867 aa28.34■■■□□ 2.13
CRAT-206ENST00000455830 KCNQ3O43525 872 aa28.33■■■□□ 2.13
CRAT-206ENST00000455830 NMRK2Q9NPI5 230 aa28.33■■■□□ 2.13
CRAT-206ENST00000455830 BTBD11A6QL63 1104 aa28.32■■■□□ 2.12
CRAT-206ENST00000455830 BICDL1Q6ZP65 573 aa28.32■■■□□ 2.12
CRAT-206ENST00000455830 U2AF1L5P0DN76 240 aaPredicted RBP28.31■■■□□ 2.12
CRAT-206ENST00000455830 U2AF1Q01081 240 aaKnown RBP eCLIP28.31■■■□□ 2.12
CRAT-206ENST00000455830 RNF181Q9P0P0 153 aa28.31■■■□□ 2.12
CRAT-206ENST00000455830 ZNF330Q9Y3S2 320 aaPredicted RBP28.31■■■□□ 2.12
CRAT-206ENST00000455830 IL6STP40189 918 aaPredicted RBP28.3■■■□□ 2.12
CRAT-206ENST00000455830 TBC1D9BQ66K14 1250 aa28.3■■■□□ 2.12
CRAT-206ENST00000455830 ANKRD31Q8N7Z5 1873 aa28.29■■■□□ 2.12
CRAT-206ENST00000455830 A1BGP04217 495 aa28.29■■■□□ 2.12
CRAT-206ENST00000455830 TBC1D2BQ9UPU7 963 aa28.29■■■□□ 2.12
CRAT-206ENST00000455830 TOMM70O94826 608 aa28.28■■■□□ 2.12
CRAT-206ENST00000455830 C2CD5Q86YS7 1000 aa28.27■■■□□ 2.12
CRAT-206ENST00000455830 BCORQ6W2J9 1755 aa28.27■■■□□ 2.12
CRAT-206ENST00000455830 RASSF7Q02833 373 aa28.26■■■□□ 2.11
CRAT-206ENST00000455830 MCM10Q7L590 875 aa28.26■■■□□ 2.11
CRAT-206ENST00000455830 TTLL6Q8N841 843 aa28.25■■■□□ 2.11
CRAT-206ENST00000455830 H0YIN7 160 aa28.24■■■□□ 2.11
CRAT-206ENST00000455830 RTF1Q92541 710 aaKnown RBP28.24■■■□□ 2.11
CRAT-206ENST00000455830 USP16Q9Y5T5 823 aa28.24■■■□□ 2.11
CRAT-206ENST00000455830 COL11A2P13942 1736 aaPredicted RBP28.23■■■□□ 2.11
CRAT-206ENST00000455830 PRAMEF22A3QJZ6 481 aa28.23■■■□□ 2.11
CRAT-206ENST00000455830 CAMTA2O94983 1202 aa28.23■■■□□ 2.11
CRAT-206ENST00000455830 DCTN1Q14203 1278 aa28.22■■■□□ 2.11
CRAT-206ENST00000455830 PRR5LQ6MZQ0 368 aa28.22■■■□□ 2.11
CRAT-206ENST00000455830 TNRC6CQ9HCJ0 1690 aaKnown RBP28.22■■■□□ 2.11
CRAT-206ENST00000455830 KDM2BQ8NHM5 1336 aa28.21■■■□□ 2.11
CRAT-206ENST00000455830 PIP4K2AP48426 406 aaPredicted RBP28.21■■■□□ 2.11
CRAT-206ENST00000455830 PRELPP51888 382 aa28.21■■■□□ 2.11
CRAT-206ENST00000455830 NPM2Q86SE8 214 aaKnown RBP28.21■■■□□ 2.11
CRAT-206ENST00000455830 CCDC24Q8N4L8 307 aa28.21■■■□□ 2.11
CRAT-206ENST00000455830 DZIP3Q86Y13 1208 aaKnown RBP28.19■■■□□ 2.1
CRAT-206ENST00000455830 BRIP1Q9BX63 1249 aa28.19■■■□□ 2.1
CRAT-206ENST00000455830 CCDC88AQ3V6T2 1871 aa28.19■■■□□ 2.1
CRAT-206ENST00000455830 TIAM2Q8IVF5 1701 aa28.18■■■□□ 2.1
CRAT-206ENST00000455830 HTATSF1O43719 755 aaKnown RBP28.18■■■□□ 2.1
CRAT-206ENST00000455830 LMNB1P20700 586 aa28.18■■■□□ 2.1
CRAT-206ENST00000455830 APLP1P51693 650 aa28.18■■■□□ 2.1
CRAT-206ENST00000455830 RBM46Q8TBY0 533 aaKnown RBP28.18■■■□□ 2.1
CRAT-206ENST00000455830 SETDB2Q96T68 719 aa28.18■■■□□ 2.1
CRAT-206ENST00000455830 SNRPA1P09661 255 aaKnown RBP28.17■■■□□ 2.1
CRAT-206ENST00000455830 PDE6BP35913 854 aa28.17■■■□□ 2.1
CRAT-206ENST00000455830 C16orf71Q8IYS4 520 aaPredicted RBP28.17■■■□□ 2.1
CRAT-206ENST00000455830 ZNF622Q969S3 477 aaKnown RBP eCLIP28.17■■■□□ 2.1
CRAT-206ENST00000455830 DLG5Q8TDM6 1919 aa28.17■■■□□ 2.1
CRAT-206ENST00000455830 ZC3H4Q9UPT8 1303 aaKnown RBP28.17■■■□□ 2.1
CRAT-206ENST00000455830 NFKBIEO00221 500 aa28.16■■■□□ 2.1
CRAT-206ENST00000455830 RRAGCQ9HB90 399 aa28.16■■■□□ 2.1
CRAT-206ENST00000455830 PDZRN3Q9UPQ7 1066 aa28.16■■■□□ 2.1
CRAT-206ENST00000455830 CNBD1Q8NA66 436 aa28.15■■■□□ 2.1
CRAT-206ENST00000455830 CACNA1SQ13698 1873 aa28.13■■■□□ 2.09
CRAT-206ENST00000455830 LAMB4A4D0S4 1761 aa28.13■■■□□ 2.09
CRAT-206ENST00000455830 FER1L6Q2WGJ9 1857 aa28.12■■■□□ 2.09
CRAT-206ENST00000455830 WDR90Q96KV7 1748 aa28.12■■■□□ 2.09
CRAT-206ENST00000455830 NBPF26B4DH59 902 aa28.12■■■□□ 2.09
CRAT-206ENST00000455830 NPHP1O15259 732 aa28.12■■■□□ 2.09
CRAT-206ENST00000455830 TAF7Q15545 349 aaPredicted RBP28.12■■■□□ 2.09
CRAT-206ENST00000455830 NBPF10Q6P3W6 841 aaKnown RBP28.12■■■□□ 2.09
CRAT-206ENST00000455830 NBPF15Q8N660 670 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms