RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 PRAMEF22A3QJZ6 481 aa14.93□□□□□ -0.02
SEMA4D-213ENST00000455551 PTMSP20962 102 aa14.93□□□□□ -0.02
SEMA4D-213ENST00000455551 AKAP4Q5JQC9 854 aa14.93□□□□□ -0.02
SEMA4D-213ENST00000455551 C1orf141Q5JVX7 400 aa14.93□□□□□ -0.02
SEMA4D-213ENST00000455551 RHPN1Q8TCX5 695 aa14.93□□□□□ -0.02
SEMA4D-213ENST00000455551 UPF3BQ9BZI7 483 aaKnown RBP14.93□□□□□ -0.02
SEMA4D-213ENST00000455551 STAP2Q9UGK3 403 aa14.93□□□□□ -0.02
SEMA4D-213ENST00000455551 MCCP23508 829 aa14.92□□□□□ -0.02
SEMA4D-213ENST00000455551 BEND3Q5T5X7 828 aa14.92□□□□□ -0.02
SEMA4D-213ENST00000455551 PXDNQ92626 1479 aa14.92□□□□□ -0.02
SEMA4D-213ENST00000455551 TMX3Q96JJ7 454 aa14.92□□□□□ -0.02
SEMA4D-213ENST00000455551 CYP2E1P05181 493 aaPredicted RBP14.91□□□□□ -0.02
SEMA4D-213ENST00000455551 PROSER3Q2NL68 480 aa14.91□□□□□ -0.02
SEMA4D-213ENST00000455551 ANKRD24Q8TF21 1146 aa14.91□□□□□ -0.02
SEMA4D-213ENST00000455551 OS9Q13438 667 aaPredicted RBP14.91□□□□□ -0.02
SEMA4D-213ENST00000455551 RNMTO43148 476 aaKnown RBP14.91□□□□□ -0.02
SEMA4D-213ENST00000455551 CLEC17AQ6ZS10 378 aa14.91□□□□□ -0.02
SEMA4D-213ENST00000455551 CWC22Q9HCG8 908 aaKnown RBP14.91□□□□□ -0.02
SEMA4D-213ENST00000455551 ZDHHC9Q9Y397 364 aa14.91□□□□□ -0.02
SEMA4D-213ENST00000455551 POLA2Q14181 598 aa14.9□□□□□ -0.02
SEMA4D-213ENST00000455551 ADCY9O60503 1353 aa14.9□□□□□ -0.02
SEMA4D-213ENST00000455551 KLHL40Q2TBA0 621 aa14.9□□□□□ -0.02
SEMA4D-213ENST00000455551 ARHGEF25Q86VW2 580 aa14.9□□□□□ -0.02
SEMA4D-213ENST00000455551 TUBGCP6Q96RT7 1819 aa14.9□□□□□ -0.02
SEMA4D-213ENST00000455551 CAVIN1Q6NZI2 390 aaKnown RBP14.9□□□□□ -0.02
SEMA4D-213ENST00000455551 AXIN2Q9Y2T1 843 aa14.9□□□□□ -0.02
SEMA4D-213ENST00000455551 RAB11FIP3O75154 756 aa14.89□□□□□ -0.03
SEMA4D-213ENST00000455551 PRPF40AO75400 957 aaKnown RBP14.89□□□□□ -0.03
SEMA4D-213ENST00000455551 MAP3K2Q9Y2U5 619 aa14.89□□□□□ -0.03
SEMA4D-213ENST00000455551 KIF1BPQ96EK5 621 aa14.89□□□□□ -0.03
SEMA4D-213ENST00000455551 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
SEMA4D-213ENST00000455551 HOXB7P09629 217 aa14.88□□□□□ -0.03
SEMA4D-213ENST00000455551 ZC3H6P61129 1189 aaKnown RBP14.88□□□□□ -0.03
SEMA4D-213ENST00000455551 CWF19L2Q2TBE0 894 aaKnown RBP14.88□□□□□ -0.03
SEMA4D-213ENST00000455551 PI4K2BQ8TCG2 481 aa14.88□□□□□ -0.03
SEMA4D-213ENST00000455551 LMBRD1Q9NUN5 540 aa14.88□□□□□ -0.03
SEMA4D-213ENST00000455551 C9orf78Q9NZ63 289 aaPredicted RBP14.88□□□□□ -0.03
SEMA4D-213ENST00000455551 N4BP2Q86UW6 1770 aaPredicted RBP14.88□□□□□ -0.03
SEMA4D-213ENST00000455551 DBF4Q9UBU7 674 aaPredicted RBP14.88□□□□□ -0.03
SEMA4D-213ENST00000455551 AIMP1Q12904 312 aaKnown RBP14.88□□□□□ -0.03
SEMA4D-213ENST00000455551 AMOTQ4VCS5 1084 aa14.88□□□□□ -0.03
SEMA4D-213ENST00000455551 ISY1Q9ULR0 285 aaKnown RBP14.88□□□□□ -0.03
SEMA4D-213ENST00000455551 KDM3BQ7LBC6 1761 aa14.87□□□□□ -0.03
SEMA4D-213ENST00000455551 PA2G4Q9UQ80 394 aaKnown RBP14.87□□□□□ -0.03
SEMA4D-213ENST00000455551 FOXD4L6Q3SYB3 417 aaPredicted RBP14.87□□□□□ -0.03
SEMA4D-213ENST00000455551 FOXD4L3Q6VB84 417 aaPredicted RBP14.87□□□□□ -0.03
SEMA4D-213ENST00000455551 GIGYF1O75420 1035 aaPredicted RBP14.86□□□□□ -0.03
SEMA4D-213ENST00000455551 AOX1Q06278 1338 aa14.86□□□□□ -0.03
SEMA4D-213ENST00000455551 RBM27Q9P2N5 1060 aaKnown RBP14.86□□□□□ -0.03
SEMA4D-213ENST00000455551 KRT28Q7Z3Y7 464 aa14.86□□□□□ -0.03
SEMA4D-213ENST00000455551 CWC27Q6UX04 472 aaKnown RBP14.85□□□□□ -0.03
SEMA4D-213ENST00000455551 NPHP4O75161 1426 aaPredicted RBP14.85□□□□□ -0.03
SEMA4D-213ENST00000455551 ANAPC15P60006 121 aa14.85□□□□□ -0.03
SEMA4D-213ENST00000455551 SLC39A6Q13433 755 aa14.85□□□□□ -0.03
SEMA4D-213ENST00000455551 PROSER2Q86WR7 435 aaPredicted RBP14.85□□□□□ -0.03
SEMA4D-213ENST00000455551 LARP6Q9BRS8 491 aaKnown RBP14.85□□□□□ -0.03
SEMA4D-213ENST00000455551 SPG7Q9UQ90 795 aa14.85□□□□□ -0.03
SEMA4D-213ENST00000455551 LMO7Q8WWI1 1683 aa14.84□□□□□ -0.03
SEMA4D-213ENST00000455551 CNTROBQ8N137 903 aa14.84□□□□□ -0.03
SEMA4D-213ENST00000455551 DDX17Q92841 729 aaKnown RBP14.84□□□□□ -0.03
SEMA4D-213ENST00000455551 MCM2P49736 904 aa14.84□□□□□ -0.03
SEMA4D-213ENST00000455551 GPT2Q8TD30 523 aa14.84□□□□□ -0.03
SEMA4D-213ENST00000455551 ZSCAN23Q3MJ62 389 aa14.84□□□□□ -0.03
SEMA4D-213ENST00000455551 CHMP4AQ9BY43 222 aa14.84□□□□□ -0.03
SEMA4D-213ENST00000455551 SGSM2O43147 1006 aa14.83□□□□□ -0.03
SEMA4D-213ENST00000455551 NASPP49321 788 aaPredicted RBP14.83□□□□□ -0.03
SEMA4D-213ENST00000455551 KSR2Q6VAB6 950 aa14.83□□□□□ -0.03
SEMA4D-213ENST00000455551 HSPA4P34932 840 aa14.83□□□□□ -0.04
SEMA4D-213ENST00000455551 HSP90AB4PQ58FF6 505 aa14.83□□□□□ -0.04
SEMA4D-213ENST00000455551 TRIM44Q96DX7 344 aaPredicted RBP14.83□□□□□ -0.04
SEMA4D-213ENST00000455551 NLRP2Q9NX02 1062 aa14.83□□□□□ -0.04
SEMA4D-213ENST00000455551 NSFL1CQ9UNZ2 370 aaKnown RBP14.83□□□□□ -0.04
SEMA4D-213ENST00000455551 CUL4AQ13619 759 aa14.82□□□□□ -0.04
SEMA4D-213ENST00000455551 CLASRPQ8N2M8 674 aaKnown RBP14.82□□□□□ -0.04
SEMA4D-213ENST00000455551 RAD50Q92878 1312 aa14.82□□□□□ -0.04
SEMA4D-213ENST00000455551 MYL6BP14649 208 aa14.82□□□□□ -0.04
SEMA4D-213ENST00000455551 RASEFQ8IZ41 740 aa14.82□□□□□ -0.04
SEMA4D-213ENST00000455551 ERBB4Q15303 1308 aa14.81□□□□□ -0.04
SEMA4D-213ENST00000455551 CPA1P15085 419 aa14.81□□□□□ -0.04
SEMA4D-213ENST00000455551 KIAA1211Q6ZU35 1233 aa14.81□□□□□ -0.04
SEMA4D-213ENST00000455551 SUCLG2Q96I99 432 aa14.81□□□□□ -0.04
SEMA4D-213ENST00000455551 DIAPH3Q9NSV4 1193 aa14.81□□□□□ -0.04
SEMA4D-213ENST00000455551 DTNBO60941 627 aa14.81□□□□□ -0.04
SEMA4D-213ENST00000455551 LSG1Q9H089 658 aaKnown RBP14.81□□□□□ -0.04
SEMA4D-213ENST00000455551 SNX14Q9Y5W7 946 aa14.81□□□□□ -0.04
SEMA4D-213ENST00000455551 ZNF142P52746 1687 aaPredicted RBP14.81□□□□□ -0.04
SEMA4D-213ENST00000455551 ALDH1L1O75891 902 aa14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 IFIT2P09913 472 aaKnown RBP14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 PIP4K2AP48426 406 aaPredicted RBP14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 AACSQ86V21 672 aa14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 SIL1Q9H173 461 aa14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 NCAPD2Q15021 1401 aa14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 ERBB3P21860 1342 aa14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 GLRX3O76003 335 aaKnown RBP14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 BRD1O95696 1058 aa14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 SLIT3O75094 1523 aa14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 TPRNQ4KMQ1 711 aa14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 RAPGEF4Q8WZA2 1011 aa14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 BICC1Q9H694 974 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms