RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 BCS1LQ9Y276 419 aa21.69■■□□□ 1.06
GPC1-206ENST00000455111 COL15A1P39059 1388 aa21.69■■□□□ 1.06
GPC1-206ENST00000455111 SCN7AQ01118 1682 aa21.69■■□□□ 1.06
GPC1-206ENST00000455111 RSPH6AQ9H0K4 717 aa21.68■■□□□ 1.06
GPC1-206ENST00000455111 SBF1O95248 1867 aa21.68■■□□□ 1.06
GPC1-206ENST00000455111 ANKRD31Q8N7Z5 1873 aa21.67■■□□□ 1.06
GPC1-206ENST00000455111 CEMIPQ8WUJ3 1361 aa21.67■■□□□ 1.06
GPC1-206ENST00000455111 KCNQ3O43525 872 aa21.66■■□□□ 1.06
GPC1-206ENST00000455111 CHRNA5P30532 468 aa21.66■■□□□ 1.06
GPC1-206ENST00000455111 VSIG10Q8N0Z9 540 aa21.66■■□□□ 1.06
GPC1-206ENST00000455111 ZNF496Q96IT1 587 aaPredicted RBP21.66■■□□□ 1.06
GPC1-206ENST00000455111 KIF3CO14782 793 aa21.65■■□□□ 1.06
GPC1-206ENST00000455111 NFIXQ14938 502 aa21.65■■□□□ 1.06
GPC1-206ENST00000455111 NARFQ9UHQ1 456 aa21.65■■□□□ 1.06
GPC1-206ENST00000455111 CARMIL3Q8ND23 1372 aa21.64■■□□□ 1.06
GPC1-206ENST00000455111 PPP2R1AP30153 589 aa21.64■■□□□ 1.05
GPC1-206ENST00000455111 GPBP1L1Q9HC44 474 aaPredicted RBP21.64■■□□□ 1.05
GPC1-206ENST00000455111 CEP350Q5VT06 3117 aa21.64■■□□□ 1.05
GPC1-206ENST00000455111 BCORQ6W2J9 1755 aa21.64■■□□□ 1.05
GPC1-206ENST00000455111 HEG1Q9ULI3 1381 aa21.63■■□□□ 1.05
GPC1-206ENST00000455111 GNAT3A8MTJ3 354 aa21.63■■□□□ 1.05
GPC1-206ENST00000455111 PRKAR2BP31323 418 aa21.63■■□□□ 1.05
GPC1-206ENST00000455111 FCHSD2O94868 740 aa21.62■■□□□ 1.05
GPC1-206ENST00000455111 EIF5P55010 431 aaKnown RBP21.62■■□□□ 1.05
GPC1-206ENST00000455111 ZNF790Q6PG37 636 aa21.62■■□□□ 1.05
GPC1-206ENST00000455111 COL11A2P13942 1736 aaPredicted RBP21.62■■□□□ 1.05
GPC1-206ENST00000455111 DLG5Q8TDM6 1919 aa21.62■■□□□ 1.05
GPC1-206ENST00000455111 CANXP27824 592 aaKnown RBP21.61■■□□□ 1.05
GPC1-206ENST00000455111 GAS2L2Q8NHY3 880 aa21.61■■□□□ 1.05
GPC1-206ENST00000455111 ZPR1O75312 459 aa21.6■■□□□ 1.05
GPC1-206ENST00000455111 ARHGAP27Q6ZUM4 889 aa21.6■■□□□ 1.05
GPC1-206ENST00000455111 PRAMEF22A3QJZ6 481 aa21.59■■□□□ 1.05
GPC1-206ENST00000455111 PRELPP51888 382 aa21.58■■□□□ 1.05
GPC1-206ENST00000455111 PIM2Q9P1W9 311 aa21.58■■□□□ 1.05
GPC1-206ENST00000455111 CCDC88AQ3V6T2 1871 aa21.56■■□□□ 1.04
GPC1-206ENST00000455111 A1BGP04217 495 aa21.56■■□□□ 1.04
GPC1-206ENST00000455111 SERPINB2P05120 415 aa21.56■■□□□ 1.04
GPC1-206ENST00000455111 TEFQ10587 303 aa21.56■■□□□ 1.04
GPC1-206ENST00000455111 TTC5Q8N0Z6 440 aa21.56■■□□□ 1.04
GPC1-206ENST00000455111 DCTN1Q14203 1278 aa21.55■■□□□ 1.04
GPC1-206ENST00000455111 DALRD3Q5D0E6 543 aaKnown RBP21.55■■□□□ 1.04
GPC1-206ENST00000455111 C9orf131Q5VYM1 1079 aa21.55■■□□□ 1.04
GPC1-206ENST00000455111 TBC1D9BQ66K14 1250 aa21.55■■□□□ 1.04
GPC1-206ENST00000455111 MCM10Q7L590 875 aa21.55■■□□□ 1.04
GPC1-206ENST00000455111 NMRK2Q9NPI5 230 aa21.54■■□□□ 1.04
GPC1-206ENST00000455111 USP16Q9Y5T5 823 aa21.54■■□□□ 1.04
GPC1-206ENST00000455111 KDM3BQ7LBC6 1761 aa21.53■■□□□ 1.04
GPC1-206ENST00000455111 PIP4K2AP48426 406 aaPredicted RBP21.53■■□□□ 1.04
GPC1-206ENST00000455111 TBC1D2BQ9UPU7 963 aa21.53■■□□□ 1.04
GPC1-206ENST00000455111 CACNA1SQ13698 1873 aa21.52■■□□□ 1.04
GPC1-206ENST00000455111 STARD3NLO95772 234 aa21.52■■□□□ 1.04
GPC1-206ENST00000455111 U2AF1L5P0DN76 240 aaPredicted RBP21.52■■□□□ 1.04
GPC1-206ENST00000455111 U2AF1Q01081 240 aaKnown RBP eCLIP21.52■■□□□ 1.04
GPC1-206ENST00000455111 BICDL1Q6ZP65 573 aa21.52■■□□□ 1.04
GPC1-206ENST00000455111 CCDC24Q8N4L8 307 aa21.52■■□□□ 1.04
GPC1-206ENST00000455111 CFAP53Q96M91 514 aa21.52■■□□□ 1.04
GPC1-206ENST00000455111 TIAM2Q8IVF5 1701 aa21.52■■□□□ 1.03
GPC1-206ENST00000455111 LAMB4A4D0S4 1761 aa21.51■■□□□ 1.03
GPC1-206ENST00000455111 BTBD11A6QL63 1104 aa21.51■■□□□ 1.03
GPC1-206ENST00000455111 CAMTA2O94983 1202 aa21.51■■□□□ 1.03
GPC1-206ENST00000455111 RASSF7Q02833 373 aa21.51■■□□□ 1.03
GPC1-206ENST00000455111 FMNL2Q96PY5 1086 aa21.51■■□□□ 1.03
GPC1-206ENST00000455111 HSPA6P17066 643 aa21.5■■□□□ 1.03
GPC1-206ENST00000455111 IL6STP40189 918 aaPredicted RBP21.5■■□□□ 1.03
GPC1-206ENST00000455111 FER1L6Q2WGJ9 1857 aa21.49■■□□□ 1.03
GPC1-206ENST00000455111 ARFGEF2Q9Y6D5 1785 aa21.49■■□□□ 1.03
GPC1-206ENST00000455111 TNRC6CQ9HCJ0 1690 aaKnown RBP21.48■■□□□ 1.03
GPC1-206ENST00000455111 PRR5LQ6MZQ0 368 aa21.48■■□□□ 1.03
GPC1-206ENST00000455111 TEX13AQ9BXU3 409 aaPredicted RBP21.48■■□□□ 1.03
GPC1-206ENST00000455111 SLX4Q8IY92 1834 aa21.48■■□□□ 1.03
GPC1-206ENST00000455111 NBPF26B4DH59 902 aa21.47■■□□□ 1.03
GPC1-206ENST00000455111 NBPF10Q6P3W6 841 aaKnown RBP21.47■■□□□ 1.03
GPC1-206ENST00000455111 C2CD5Q86YS7 1000 aa21.47■■□□□ 1.03
GPC1-206ENST00000455111 NBPF15Q8N660 670 aa21.47■■□□□ 1.03
GPC1-206ENST00000455111 PLEKHF1Q96S99 279 aa21.47■■□□□ 1.03
GPC1-206ENST00000455111 RNF181Q9P0P0 153 aa21.47■■□□□ 1.03
GPC1-206ENST00000455111 NUDCQ9Y266 331 aa21.47■■□□□ 1.03
GPC1-206ENST00000455111 ZNF330Q9Y3S2 320 aaPredicted RBP21.47■■□□□ 1.03
GPC1-206ENST00000455111 A0A087WZG4 1122 aa21.46■■□□□ 1.03
GPC1-206ENST00000455111 NFKBIEO00221 500 aa21.45■■□□□ 1.02
GPC1-206ENST00000455111 MIS18AQ9NYP9 233 aa21.45■■□□□ 1.02
GPC1-206ENST00000455111 DICER1Q9UPY3 1922 aaKnown RBP21.45■■□□□ 1.02
GPC1-206ENST00000455111 WDR90Q96KV7 1748 aa21.44■■□□□ 1.02
GPC1-206ENST00000455111 TOMM70O94826 608 aa21.43■■□□□ 1.02
GPC1-206ENST00000455111 DZIP3Q86Y13 1208 aaKnown RBP21.42■■□□□ 1.02
GPC1-206ENST00000455111 TTLL6Q8N841 843 aa21.42■■□□□ 1.02
GPC1-206ENST00000455111 HTATSF1O43719 755 aaKnown RBP21.41■■□□□ 1.02
GPC1-206ENST00000455111 THUMPD2Q9BTF0 503 aaKnown RBP21.41■■□□□ 1.02
GPC1-206ENST00000455111 BRIP1Q9BX63 1249 aa21.41■■□□□ 1.02
GPC1-206ENST00000455111 H0YIN7 160 aa21.4■■□□□ 1.02
GPC1-206ENST00000455111 SNRPA1P09661 255 aaKnown RBP21.4■■□□□ 1.02
GPC1-206ENST00000455111 NUP98P52948 1817 aa21.4■■□□□ 1.02
GPC1-206ENST00000455111 RTF1Q92541 710 aaKnown RBP21.39■■□□□ 1.01
GPC1-206ENST00000455111 RRAGCQ9HB90 399 aa21.39■■□□□ 1.01
GPC1-206ENST00000455111 TAF7Q15545 349 aaPredicted RBP21.38■■□□□ 1.01
GPC1-206ENST00000455111 HLFQ16534 295 aa21.37■■□□□ 1.01
GPC1-206ENST00000455111 DNAJC5GQ8N7S2 189 aa21.37■■□□□ 1.01
GPC1-206ENST00000455111 POTECB2RU33 542 aa21.36■■□□□ 1.01
GPC1-206ENST00000455111 C21orf2O43822 256 aa21.36■■□□□ 1.01
GPC1-206ENST00000455111 LMNB1P20700 586 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms