RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 KCPQ6ZWJ8 1503 aa8.56□□□□□ -1.04
ECHDC1-210ENST00000454859 SPATA31A1Q5TZJ5 1347 aa8.56□□□□□ -1.04
ECHDC1-210ENST00000454859 GNAI2P04899 355 aa8.56□□□□□ -1.04
ECHDC1-210ENST00000454859 NUCB1Q02818 461 aa8.56□□□□□ -1.04
ECHDC1-210ENST00000454859 KSR2Q6VAB6 950 aa8.56□□□□□ -1.04
ECHDC1-210ENST00000454859 BCL9O00512 1426 aa8.56□□□□□ -1.04
ECHDC1-210ENST00000454859 UBAP1LF5GYI3 381 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 KRT24Q2M2I5 525 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 NFATC2IPQ8NCF5 419 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 CERKQ8TCT0 537 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 SRCIN1Q9C0H9 1055 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 DCTPP1Q9H773 170 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 SPATA31A5Q5VU36 1347 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 SPATA31A7Q8IWB4 1347 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 EXOC5O00471 708 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 DNAAF4Q8WXU2 420 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 BACH2Q9BYV9 841 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 TNNQ9UQP3 1299 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 UTYO14607 1347 aa8.55□□□□□ -1.04
ECHDC1-210ENST00000454859 RGL2O15211 777 aa8.54□□□□□ -1.04
ECHDC1-210ENST00000454859 FNBP4Q8N3X1 1017 aaPredicted RBP8.54□□□□□ -1.04
ECHDC1-210ENST00000454859 VPS72Q15906 364 aa8.54□□□□□ -1.04
ECHDC1-210ENST00000454859 HSP90AB4PQ58FF6 505 aa8.54□□□□□ -1.04
ECHDC1-210ENST00000454859 UNC5CLQ8IV45 518 aa8.54□□□□□ -1.04
ECHDC1-210ENST00000454859 LINS1Q8NG48 757 aa8.54□□□□□ -1.04
ECHDC1-210ENST00000454859 STRN4Q9NRL3 753 aa8.54□□□□□ -1.04
ECHDC1-210ENST00000454859 CHPF2Q9P2E5 772 aa8.54□□□□□ -1.04
ECHDC1-210ENST00000454859 ARFGEF2Q9Y6D5 1785 aa8.54□□□□□ -1.04
ECHDC1-210ENST00000454859 MTX1Q13505 466 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 TMOD3Q9NYL9 352 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 ZBTB47Q9UFB7 747 aaPredicted RBP8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 PDZRN3Q9UPQ7 1066 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 RREB1Q92766 1687 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 NUP188Q5SRE5 1749 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 RAB11FIP3O75154 756 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 PDE4AP27815 886 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 ATP8B2P98198 1209 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 NEXNQ0ZGT2 675 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 BEND3Q5T5X7 828 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 CEP85Q6P2H3 762 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 G2E3Q7L622 706 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 CHD1LQ86WJ1 897 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 IL27Q8NEV9 243 aa8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 ZNF496Q96IT1 587 aaPredicted RBP8.53□□□□□ -1.04
ECHDC1-210ENST00000454859 THSD7AQ9UPZ6 1657 aa8.52□□□□□ -1.04
ECHDC1-210ENST00000454859 ADCY9O60503 1353 aa8.52□□□□□ -1.05
ECHDC1-210ENST00000454859 DOT1LQ8TEK3 1739 aa8.52□□□□□ -1.05
ECHDC1-210ENST00000454859 AFDNP55196 1824 aaKnown RBP8.52□□□□□ -1.05
ECHDC1-210ENST00000454859 UBTFL1P0CB47 393 aaPredicted RBP8.52□□□□□ -1.05
ECHDC1-210ENST00000454859 PDIA6Q15084 440 aa8.52□□□□□ -1.05
ECHDC1-210ENST00000454859 SMARCC1Q92922 1105 aaPredicted RBP8.52□□□□□ -1.05
ECHDC1-210ENST00000454859 AOX1Q06278 1338 aa8.51□□□□□ -1.05
ECHDC1-210ENST00000454859 KCNQ3O43525 872 aa8.51□□□□□ -1.05
ECHDC1-210ENST00000454859 STARD3NLO95772 234 aa8.51□□□□□ -1.05
ECHDC1-210ENST00000454859 EIF2S2P20042 333 aaKnown RBP8.51□□□□□ -1.05
ECHDC1-210ENST00000454859 PLBD2Q8NHP8 589 aa8.51□□□□□ -1.05
ECHDC1-210ENST00000454859 USP44Q9H0E7 712 aa8.51□□□□□ -1.05
ECHDC1-210ENST00000454859 PLEKHG5O94827 1062 aa8.51□□□□□ -1.05
ECHDC1-210ENST00000454859 DDB1Q16531 1140 aa8.51□□□□□ -1.05
ECHDC1-210ENST00000454859 BMP2KLQ5H9B9 411 aa8.51□□□□□ -1.05
ECHDC1-210ENST00000454859 SSH3Q8TE77 659 aa8.51□□□□□ -1.05
ECHDC1-210ENST00000454859 METTL22Q9BUU2 404 aaPredicted RBP8.51□□□□□ -1.05
ECHDC1-210ENST00000454859 ANKRD36CQ5JPF3 1778 aa8.5□□□□□ -1.05
ECHDC1-210ENST00000454859 PI4KAP2A4QPH2 592 aa8.5□□□□□ -1.05
ECHDC1-210ENST00000454859 DCAF8L1A6NGE4 600 aa8.5□□□□□ -1.05
ECHDC1-210ENST00000454859 TRIM28Q13263 835 aaKnown RBP8.5□□□□□ -1.05
ECHDC1-210ENST00000454859 SLC4A10Q6U841 1118 aa8.5□□□□□ -1.05
ECHDC1-210ENST00000454859 LRP10Q7Z4F1 713 aa8.5□□□□□ -1.05
ECHDC1-210ENST00000454859 SIRT2Q8IXJ6 389 aa8.5□□□□□ -1.05
ECHDC1-210ENST00000454859 PI4KAP1Q8N8J0 262 aa8.5□□□□□ -1.05
ECHDC1-210ENST00000454859 MEIS3Q99687 375 aa8.5□□□□□ -1.05
ECHDC1-210ENST00000454859 BCL9LQ86UU0 1499 aa8.5□□□□□ -1.05
ECHDC1-210ENST00000454859 POLA2Q14181 598 aa8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 ANKRD13DQ6ZTN6 518 aa8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 TICAM2Q86XR7 235 aa8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 ERC1Q8IUD2 1116 aa8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 OSBPL3Q9H4L5 887 aa8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 TJP1Q07157 1748 aa8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 ANP32AP39687 249 aaKnown RBP8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 HSP90AB3PQ58FF7 597 aa8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 DDX54Q8TDD1 881 aaKnown RBP8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 PHAXQ9H814 394 aaKnown RBP8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 MAP3K2Q9Y2U5 619 aa8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 NOP58Q9Y2X3 529 aaKnown RBP8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 NHSQ6T4R5 1651 aa8.49□□□□□ -1.05
ECHDC1-210ENST00000454859 F6X3S4 739 aa8.48□□□□□ -1.05
ECHDC1-210ENST00000454859 PIP4K2BP78356 416 aa8.48□□□□□ -1.05
ECHDC1-210ENST00000454859 DDRGK1Q96HY6 314 aa8.48□□□□□ -1.05
ECHDC1-210ENST00000454859 UPF2Q9HAU5 1272 aaKnown RBP8.48□□□□□ -1.05
ECHDC1-210ENST00000454859 KAT6BQ8WYB5 2073 aa8.48□□□□□ -1.05
ECHDC1-210ENST00000454859 GRM8O00222 908 aa8.48□□□□□ -1.05
ECHDC1-210ENST00000454859 SLC39A6Q13433 755 aa8.48□□□□□ -1.05
ECHDC1-210ENST00000454859 C8orf34Q49A92 452 aa8.48□□□□□ -1.05
ECHDC1-210ENST00000454859 RIC3Q7Z5B4 369 aa8.48□□□□□ -1.05
ECHDC1-210ENST00000454859 EPB41L2O43491 1005 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 ONECUT3O60422 494 aaPredicted RBP8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 ANKRD45Q5TZF3 282 aa8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 CCDC191Q8NCU4 936 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms