RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 HOXB7P09629 217 aa7.71□□□□□ -1.18
MSH6-205ENST00000454137 TAF7Q15545 349 aaPredicted RBP7.71□□□□□ -1.18
MSH6-205ENST00000454137 IL17REQ8NFR9 667 aa7.71□□□□□ -1.18
MSH6-205ENST00000454137 TMC2Q8TDI7 906 aa7.71□□□□□ -1.18
MSH6-205ENST00000454137 THUMPD2Q9BTF0 503 aaKnown RBP7.71□□□□□ -1.18
MSH6-205ENST00000454137 NLRP2Q9NX02 1062 aa7.71□□□□□ -1.18
MSH6-205ENST00000454137 KIF16BQ96L93 1317 aa7.71□□□□□ -1.18
MSH6-205ENST00000454137 JCADQ9P266 1359 aa7.71□□□□□ -1.18
MSH6-205ENST00000454137 SHANK3Q9BYB0 1731 aa7.7□□□□□ -1.18
MSH6-205ENST00000454137 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.7□□□□□ -1.18
MSH6-205ENST00000454137 MEGF6O75095 1541 aa7.7□□□□□ -1.18
MSH6-205ENST00000454137 UBAP1LF5GYI3 381 aa7.7□□□□□ -1.18
MSH6-205ENST00000454137 IPO8O15397 1037 aaKnown RBP7.7□□□□□ -1.18
MSH6-205ENST00000454137 CSB-PGBD3P0DP91 1061 aa7.7□□□□□ -1.18
MSH6-205ENST00000454137 CHRNA2Q15822 529 aa7.7□□□□□ -1.18
MSH6-205ENST00000454137 C1orf141Q5JVX7 400 aa7.7□□□□□ -1.18
MSH6-205ENST00000454137 ZNF530Q6P9A1 599 aaPredicted RBP7.7□□□□□ -1.18
MSH6-205ENST00000454137 MCM10Q7L590 875 aa7.7□□□□□ -1.18
MSH6-205ENST00000454137 MICALL2Q8IY33 904 aa7.7□□□□□ -1.18
MSH6-205ENST00000454137 IFNL2Q8IZJ0 200 aa7.7□□□□□ -1.18
MSH6-205ENST00000454137 USHBP1Q8N6Y0 703 aa7.7□□□□□ -1.18
MSH6-205ENST00000454137 CDCA7Q9BWT1 371 aaPredicted RBP7.7□□□□□ -1.18
MSH6-205ENST00000454137 THRAP3Q9Y2W1 955 aaKnown RBP7.7□□□□□ -1.18
MSH6-205ENST00000454137 SPATA31A6Q5VVP1 1343 aa7.7□□□□□ -1.18
MSH6-205ENST00000454137 SLIT2O94813 1529 aa7.69□□□□□ -1.18
MSH6-205ENST00000454137 ZBTB7CA1YPR0 619 aa7.69□□□□□ -1.18
MSH6-205ENST00000454137 RNMTO43148 476 aaKnown RBP7.69□□□□□ -1.18
MSH6-205ENST00000454137 DCTN1Q14203 1278 aa7.69□□□□□ -1.18
MSH6-205ENST00000454137 TWISTNBQ3B726 338 aaPredicted RBP7.69□□□□□ -1.18
MSH6-205ENST00000454137 DCAF5Q96JK2 942 aa7.69□□□□□ -1.18
MSH6-205ENST00000454137 IPO9Q96P70 1041 aaKnown RBP7.69□□□□□ -1.18
MSH6-205ENST00000454137 OCEL1Q9H607 264 aa7.69□□□□□ -1.18
MSH6-205ENST00000454137 LRP6O75581 1613 aa7.69□□□□□ -1.18
MSH6-205ENST00000454137 HEG1Q9ULI3 1381 aa7.69□□□□□ -1.18
MSH6-205ENST00000454137 DISP2A7MBM2 1401 aa7.69□□□□□ -1.18
MSH6-205ENST00000454137 ZMYND10O75800 440 aa7.68□□□□□ -1.18
MSH6-205ENST00000454137 IL2RBP14784 551 aa7.68□□□□□ -1.18
MSH6-205ENST00000454137 PHKG2P15735 406 aa7.68□□□□□ -1.18
MSH6-205ENST00000454137 EVA1CP58658 441 aa7.68□□□□□ -1.18
MSH6-205ENST00000454137 FOXK1P85037 733 aa7.68□□□□□ -1.18
MSH6-205ENST00000454137 ZKSCAN2Q63HK3 967 aa7.68□□□□□ -1.18
MSH6-205ENST00000454137 TOM1L2Q6ZVM7 507 aa7.68□□□□□ -1.18
MSH6-205ENST00000454137 SSH1Q8WYL5 1049 aa7.68□□□□□ -1.18
MSH6-205ENST00000454137 CHMP4BQ9H444 224 aaKnown RBP7.68□□□□□ -1.18
MSH6-205ENST00000454137 LAS1LQ9Y4W2 734 aaKnown RBP7.68□□□□□ -1.18
MSH6-205ENST00000454137 PCDH11XQ9BZA7 1347 aa7.68□□□□□ -1.18
MSH6-205ENST00000454137 PCDH11YQ9BZA8 1340 aa7.68□□□□□ -1.18
MSH6-205ENST00000454137 N4BP2Q86UW6 1770 aaPredicted RBP7.67□□□□□ -1.18
MSH6-205ENST00000454137 ERVV-2B6SEH9 535 aa7.67□□□□□ -1.18
MSH6-205ENST00000454137 CANXP27824 592 aaKnown RBP7.67□□□□□ -1.18
MSH6-205ENST00000454137 TEFQ10587 303 aa7.67□□□□□ -1.18
MSH6-205ENST00000454137 ATF7IPQ6VMQ6 1270 aa7.67□□□□□ -1.18
MSH6-205ENST00000454137 MRPL50Q8N5N7 158 aaKnown RBP7.67□□□□□ -1.18
MSH6-205ENST00000454137 PDCD7Q8N8D1 485 aaKnown RBP7.67□□□□□ -1.18
MSH6-205ENST00000454137 C8orf58Q8NAV2 365 aa7.67□□□□□ -1.18
MSH6-205ENST00000454137 ZCRB1Q8TBF4 217 aaKnown RBP7.67□□□□□ -1.18
MSH6-205ENST00000454137 BCL2L13Q9BXK5 485 aa7.67□□□□□ -1.18
MSH6-205ENST00000454137 SMC4Q9NTJ3 1288 aa7.67□□□□□ -1.18
MSH6-205ENST00000454137 BTG4Q9NY30 223 aa7.67□□□□□ -1.18
MSH6-205ENST00000454137 TSPYL4Q9UJ04 414 aa7.67□□□□□ -1.18
MSH6-205ENST00000454137 BOLA1Q9Y3E2 137 aa7.67□□□□□ -1.18
MSH6-205ENST00000454137 UBR2Q8IWV8 1755 aa7.66□□□□□ -1.18
MSH6-205ENST00000454137 ATMINO43313 823 aaPredicted RBP7.66□□□□□ -1.18
MSH6-205ENST00000454137 ATN1P54259 1190 aaPredicted RBP7.66□□□□□ -1.18
MSH6-205ENST00000454137 IRX5P78411 483 aaPredicted RBP7.66□□□□□ -1.18
MSH6-205ENST00000454137 DSG2Q14126 1118 aa7.66□□□□□ -1.18
MSH6-205ENST00000454137 ASTLQ6HA08 431 aaPredicted RBP7.66□□□□□ -1.18
MSH6-205ENST00000454137 DPY19L2Q6NUT2 758 aa7.66□□□□□ -1.18
MSH6-205ENST00000454137 LARP1Q6PKG0 1096 aaKnown RBP7.66□□□□□ -1.18
MSH6-205ENST00000454137 PANK1Q8TE04 598 aa7.66□□□□□ -1.18
MSH6-205ENST00000454137 FRAT1Q92837 279 aaPredicted RBP7.66□□□□□ -1.18
MSH6-205ENST00000454137 L3MBTL3Q96JM7 780 aaPredicted RBP7.66□□□□□ -1.18
MSH6-205ENST00000454137 TMEM121BQ9BXQ6 578 aaPredicted RBP7.66□□□□□ -1.18
MSH6-205ENST00000454137 SLC52A2Q9HAB3 445 aa7.66□□□□□ -1.18
MSH6-205ENST00000454137 LGR6Q9HBX8 967 aa7.66□□□□□ -1.18
MSH6-205ENST00000454137 TNNQ9UQP3 1299 aa7.66□□□□□ -1.18
MSH6-205ENST00000454137 PTPRCP08575 1304 aa7.66□□□□□ -1.18
MSH6-205ENST00000454137 KDM6AO15550 1401 aaPredicted RBP7.66□□□□□ -1.18
MSH6-205ENST00000454137 PAPPAQ13219 1627 aa7.66□□□□□ -1.18
MSH6-205ENST00000454137 CYP27B1O15528 508 aa7.65□□□□□ -1.18
MSH6-205ENST00000454137 EIF4A1P60842 406 aaKnown RBP7.65□□□□□ -1.18
MSH6-205ENST00000454137 PIP4K2BP78356 416 aa7.65□□□□□ -1.18
MSH6-205ENST00000454137 PDIA6Q15084 440 aa7.65□□□□□ -1.18
MSH6-205ENST00000454137 CCDC30Q5VVM6 783 aa7.65□□□□□ -1.18
MSH6-205ENST00000454137 BARGINQ6ZT62 677 aa7.65□□□□□ -1.18
MSH6-205ENST00000454137 DZIP1LQ8IYY4 767 aaKnown RBP7.65□□□□□ -1.18
MSH6-205ENST00000454137 FNBP4Q8N3X1 1017 aaPredicted RBP7.65□□□□□ -1.18
MSH6-205ENST00000454137 TSPYL6Q8N831 410 aa7.65□□□□□ -1.18
MSH6-205ENST00000454137 API5Q9BZZ5 524 aaKnown RBP7.65□□□□□ -1.18
MSH6-205ENST00000454137 SLC24A3Q9HC58 644 aa7.65□□□□□ -1.18
MSH6-205ENST00000454137 IBTKQ9P2D0 1353 aaPredicted RBP7.65□□□□□ -1.18
MSH6-205ENST00000454137 DAXXQ9UER7 740 aaPredicted RBP7.65□□□□□ -1.18
MSH6-205ENST00000454137 LAMB4A4D0S4 1761 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 SPATA31A1Q5TZJ5 1347 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 BTBD11A6QL63 1104 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 DPYSL4O14531 572 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 RLBP1P12271 317 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 TRIM27P14373 513 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 PLCG2P16885 1265 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 MVPQ14764 893 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms