RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 POLMQ9NP87 494 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P15-201ENST00000453854 CYLDQ9NQC7 956 aa6.44□□□□□ -1.38
HMGB1P15-201ENST00000453854 BACH1O14867 736 aa6.43□□□□□ -1.38
HMGB1P15-201ENST00000453854 GNRH1P01148 92 aa6.43□□□□□ -1.38
HMGB1P15-201ENST00000453854 IGFBP4P22692 258 aa6.43□□□□□ -1.38
HMGB1P15-201ENST00000453854 FKBP5Q13451 457 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P15-201ENST00000453854 ECM1Q16610 540 aa6.43□□□□□ -1.38
HMGB1P15-201ENST00000453854 RNFT1Q5M7Z0 435 aa6.43□□□□□ -1.38
HMGB1P15-201ENST00000453854 FAM181BA6NEQ2 426 aa6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 C21orf2O43822 256 aa6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 ICMTO60725 284 aa6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 LGR5O75473 907 aa6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 ERCC3P19447 782 aa6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 PTGIRP43119 386 aa6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 GAS2L2Q8NHY3 880 aa6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 NANOS1Q8WY41 292 aaKnown RBP6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 CNTNAP3BQ96NU0 1288 aa6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 CNTNAP3Q9BZ76 1288 aa6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 ESF1Q9H501 851 aaKnown RBP6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 ETNK1Q9HBU6 452 aa6.42□□□□□ -1.38
HMGB1P15-201ENST00000453854 FOXO3O43524 673 aa6.41□□□□□ -1.38
HMGB1P15-201ENST00000453854 PTCD1O75127 700 aaKnown RBP6.41□□□□□ -1.38
HMGB1P15-201ENST00000453854 STAU1O95793 577 aaKnown RBP6.41□□□□□ -1.38
HMGB1P15-201ENST00000453854 ITGA6P23229 1130 aa6.41□□□□□ -1.38
HMGB1P15-201ENST00000453854 FOXK2Q01167 660 aa6.41□□□□□ -1.38
HMGB1P15-201ENST00000453854 MTFR1Q15390 333 aa6.41□□□□□ -1.38
HMGB1P15-201ENST00000453854 NOM1Q5C9Z4 860 aaKnown RBP6.41□□□□□ -1.38
HMGB1P15-201ENST00000453854 CYP2U1Q7Z449 544 aa6.41□□□□□ -1.38
HMGB1P15-201ENST00000453854 TNS4Q8IZW8 715 aa6.41□□□□□ -1.38
HMGB1P15-201ENST00000453854 COL25A1Q9BXS0 654 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P15-201ENST00000453854 SEPT3Q9UH03 358 aa6.41□□□□□ -1.38
HMGB1P15-201ENST00000453854 SF3B2Q13435 895 aaKnown RBP6.4□□□□□ -1.38
HMGB1P15-201ENST00000453854 CAPN12Q6ZSI9 719 aa6.4□□□□□ -1.38
HMGB1P15-201ENST00000453854 VWA5B2Q8N398 1253 aa6.4□□□□□ -1.38
HMGB1P15-201ENST00000453854 STAG2Q8N3U4 1231 aa6.4□□□□□ -1.38
HMGB1P15-201ENST00000453854 GTF3C2Q8WUA4 911 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P15-201ENST00000453854 ZNF428Q96B54 188 aa6.4□□□□□ -1.38
HMGB1P15-201ENST00000453854 CUEDC1Q9NWM3 386 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P15-201ENST00000453854 HRH3Q9Y5N1 445 aa6.4□□□□□ -1.38
HMGB1P15-201ENST00000453854 ATAD2Q6PL18 1390 aa6.4□□□□□ -1.39
HMGB1P15-201ENST00000453854 NPR3P17342 541 aa6.39□□□□□ -1.39
HMGB1P15-201ENST00000453854 FKBP4Q02790 459 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB1P15-201ENST00000453854 ESCO1Q5FWF5 840 aa6.39□□□□□ -1.39
HMGB1P15-201ENST00000453854 POTEAQ6S8J7 498 aa6.39□□□□□ -1.39
HMGB1P15-201ENST00000453854 SCG3Q8WXD2 468 aaKnown RBP6.39□□□□□ -1.39
HMGB1P15-201ENST00000453854 XAGE2Q96GT9 111 aa6.39□□□□□ -1.39
HMGB1P15-201ENST00000453854 SCHIP1Q9P0W5 487 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P15-201ENST00000453854 DNMT3AQ9Y6K1 912 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P15-201ENST00000453854 RBM47A0AV96 593 aaKnown RBP6.38□□□□□ -1.39
HMGB1P15-201ENST00000453854 CDC14CA4D256 554 aa6.38□□□□□ -1.39
HMGB1P15-201ENST00000453854 ABL1P00519 1130 aa6.38□□□□□ -1.39
HMGB1P15-201ENST00000453854 GSK3AP49840 483 aa6.38□□□□□ -1.39
HMGB1P15-201ENST00000453854 SMTNP53814 917 aa6.38□□□□□ -1.39
HMGB1P15-201ENST00000453854 MARSP56192 900 aaKnown RBP6.38□□□□□ -1.39
HMGB1P15-201ENST00000453854 ZNF211Q13398 564 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P15-201ENST00000453854 WHAMMQ8TF30 809 aa6.38□□□□□ -1.39
HMGB1P15-201ENST00000453854 MKNK1Q9BUB5 465 aa6.38□□□□□ -1.39
HMGB1P15-201ENST00000453854 TSPAN10Q9H1Z9 355 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P15-201ENST00000453854 SERTAD1Q9UHV2 236 aa6.38□□□□□ -1.39
HMGB1P15-201ENST00000453854 A6NJY4 79 aa6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 H3BRB1 525 aa6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 IL2RAP01589 272 aa6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 RHOQP17081 205 aa6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 RBM25P49756 843 aaKnown RBP6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 RNF144AP50876 292 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 ARHGAP4P98171 946 aa6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 LYSMD3Q7Z3D4 306 aa6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 PRICKLE2Q7Z3G6 844 aa6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 HELQQ8TDG4 1101 aa6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 TUT1Q9H6E5 874 aaKnown RBP6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 IQSEC3Q9UPP2 1182 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P15-201ENST00000453854 A0A1W2PRU2 124 aa6.36□□□□□ -1.39
HMGB1P15-201ENST00000453854 CDK2AP1O14519 115 aa6.36□□□□□ -1.39
HMGB1P15-201ENST00000453854 CLN3Q13286 438 aa6.36□□□□□ -1.39
HMGB1P15-201ENST00000453854 ZNF385CQ66K41 422 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P15-201ENST00000453854 GLYCTKQ8IVS8 523 aa6.36□□□□□ -1.39
HMGB1P15-201ENST00000453854 ESYT1Q9BSJ8 1104 aa6.36□□□□□ -1.39
HMGB1P15-201ENST00000453854 C2orf49Q9BVC5 232 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P15-201ENST00000453854 ARHGEF10LQ9HCE6 1279 aa6.36□□□□□ -1.39
HMGB1P15-201ENST00000453854 ANO2Q9NQ90 1003 aa6.36□□□□□ -1.39
HMGB1P15-201ENST00000453854 BIN2Q9UBW5 565 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P15-201ENST00000453854 MEN1O00255 615 aa6.35□□□□□ -1.39
HMGB1P15-201ENST00000453854 SLURP2P0DP57 97 aa6.35□□□□□ -1.39
HMGB1P15-201ENST00000453854 SV2AQ7L0J3 742 aa6.35□□□□□ -1.39
HMGB1P15-201ENST00000453854 NPAS4Q8IUM7 802 aa6.35□□□□□ -1.39
HMGB1P15-201ENST00000453854 SLC9A9Q8IVB4 645 aa6.35□□□□□ -1.39
HMGB1P15-201ENST00000453854 ZNF295-AS1Q8N0V1 137 aa6.35□□□□□ -1.39
HMGB1P15-201ENST00000453854 RAB6BQ9NRW1 208 aa6.35□□□□□ -1.39
HMGB1P15-201ENST00000453854 PPP1R12BO60237 982 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P15-201ENST00000453854 HIRAP54198 1017 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P15-201ENST00000453854 PSMA6P60900 246 aaKnown RBP6.34□□□□□ -1.39
HMGB1P15-201ENST00000453854 MTMR3Q13615 1198 aa6.34□□□□□ -1.39
HMGB1P15-201ENST00000453854 GAS6Q14393 721 aa6.34□□□□□ -1.39
HMGB1P15-201ENST00000453854 NAA30Q147X3 362 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P15-201ENST00000453854 CNKSR1Q969H4 720 aa6.34□□□□□ -1.39
HMGB1P15-201ENST00000453854 FHDC1Q9C0D6 1143 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P15-201ENST00000453854 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGB1P15-201ENST00000453854 USP3Q9Y6I4 520 aa6.34□□□□□ -1.39
HMGB1P15-201ENST00000453854 ANKRD33BA6NCL7 494 aa6.33□□□□□ -1.4
HMGB1P15-201ENST00000453854 E9PSI1 815 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms