RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
UBE2D3-210ENST00000453744 MYOM1P52179 1685 aa16.49■□□□□ 0.23
UBE2D3-210ENST00000453744 LRMPQ12912 555 aa16.48■□□□□ 0.23
UBE2D3-210ENST00000453744 SIL1Q9H173 461 aa16.48■□□□□ 0.23
UBE2D3-210ENST00000453744 RAB11FIP3O75154 756 aa16.48■□□□□ 0.23
UBE2D3-210ENST00000453744 DACT1Q9NYF0 836 aa16.48■□□□□ 0.23
UBE2D3-210ENST00000453744 ABCC1P33527 1531 aa16.48■□□□□ 0.23
UBE2D3-210ENST00000453744 ATP8B2P98198 1209 aa16.48■□□□□ 0.23
UBE2D3-210ENST00000453744 ANO6Q4KMQ2 910 aa16.48■□□□□ 0.23
UBE2D3-210ENST00000453744 SPHKAPQ2M3C7 1700 aa16.47■□□□□ 0.23
UBE2D3-210ENST00000453744 CHL1O00533 1208 aa16.47■□□□□ 0.23
UBE2D3-210ENST00000453744 ATP2B3Q16720 1220 aa16.47■□□□□ 0.23
UBE2D3-210ENST00000453744 TRERF1Q96PN7 1200 aa16.47■□□□□ 0.23
UBE2D3-210ENST00000453744 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
UBE2D3-210ENST00000453744 HTATSF1O43719 755 aaKnown RBP16.47■□□□□ 0.23
UBE2D3-210ENST00000453744 AIMP1Q12904 312 aaKnown RBP16.47■□□□□ 0.23
UBE2D3-210ENST00000453744 PTCH1Q13635 1447 aa16.47■□□□□ 0.23
UBE2D3-210ENST00000453744 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
UBE2D3-210ENST00000453744 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
UBE2D3-210ENST00000453744 CLIP2Q9UDT6 1046 aa16.46■□□□□ 0.23
UBE2D3-210ENST00000453744 SNX14Q9Y5W7 946 aa16.46■□□□□ 0.23
UBE2D3-210ENST00000453744 NRDCO43847 1150 aa16.46■□□□□ 0.23
UBE2D3-210ENST00000453744 CUL4AQ13619 759 aa16.46■□□□□ 0.23
UBE2D3-210ENST00000453744 YTHDC2Q9H6S0 1430 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-210ENST00000453744 ZNF165P49910 485 aa16.46■□□□□ 0.23
UBE2D3-210ENST00000453744 TAF7Q15545 349 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-210ENST00000453744 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
UBE2D3-210ENST00000453744 MTHFSDQ2M296 383 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-210ENST00000453744 DNAJC25Q9H1X3 360 aa16.45■□□□□ 0.22
UBE2D3-210ENST00000453744 TYRO3Q06418 890 aa16.45■□□□□ 0.22
UBE2D3-210ENST00000453744 HOMER1Q86YM7 354 aa16.45■□□□□ 0.22
UBE2D3-210ENST00000453744 KIF1BPQ96EK5 621 aa16.45■□□□□ 0.22
UBE2D3-210ENST00000453744 SF3A1Q15459 793 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-210ENST00000453744 FAM200AQ8TCP9 573 aa16.45■□□□□ 0.22
UBE2D3-210ENST00000453744 AACSQ86V21 672 aa16.45■□□□□ 0.22
UBE2D3-210ENST00000453744 NLRP6P59044 892 aa16.44■□□□□ 0.22
UBE2D3-210ENST00000453744 BLOC1S2Q6QNY1 142 aa16.44■□□□□ 0.22
UBE2D3-210ENST00000453744 PRDM4Q9UKN5 801 aa16.44■□□□□ 0.22
UBE2D3-210ENST00000453744 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
UBE2D3-210ENST00000453744 ZFYVE9O95405 1425 aa16.44■□□□□ 0.22
UBE2D3-210ENST00000453744 PDCP20941 246 aa16.44■□□□□ 0.22
UBE2D3-210ENST00000453744 DMTNQ08495 405 aa16.43■□□□□ 0.22
UBE2D3-210ENST00000453744 TEFQ10587 303 aa16.43■□□□□ 0.22
UBE2D3-210ENST00000453744 RNF20Q5VTR2 975 aa16.43■□□□□ 0.22
UBE2D3-210ENST00000453744 CCDC8Q9H0W5 538 aaPredicted RBP16.43■□□□□ 0.22
UBE2D3-210ENST00000453744 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBE2D3-210ENST00000453744 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
UBE2D3-210ENST00000453744 NRBP1Q9UHY1 535 aa16.43■□□□□ 0.22
UBE2D3-210ENST00000453744 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
UBE2D3-210ENST00000453744 SDF4Q9BRK5 362 aa16.43■□□□□ 0.22
UBE2D3-210ENST00000453744 BOLA2Q9H3K6 86 aa16.43■□□□□ 0.22
UBE2D3-210ENST00000453744 FAM135BQ49AJ0 1406 aa16.42■□□□□ 0.22
UBE2D3-210ENST00000453744 CCDC73Q6ZRK6 1079 aa16.42■□□□□ 0.22
UBE2D3-210ENST00000453744 RUFY3Q7L099 469 aa16.42■□□□□ 0.22
UBE2D3-210ENST00000453744 CFAP74Q9C0B2 1584 aa16.42■□□□□ 0.22
UBE2D3-210ENST00000453744 ZFYVE16Q7Z3T8 1539 aa16.42■□□□□ 0.22
UBE2D3-210ENST00000453744 HSPA4P34932 840 aa16.42■□□□□ 0.22
UBE2D3-210ENST00000453744 NAA30Q147X3 362 aaPredicted RBP16.42■□□□□ 0.22
UBE2D3-210ENST00000453744 HSP90AB4PQ58FF6 505 aa16.42■□□□□ 0.22
UBE2D3-210ENST00000453744 ZSCAN31Q96LW9 406 aaPredicted RBP16.42■□□□□ 0.22
UBE2D3-210ENST00000453744 LARGE1O95461 756 aa16.42■□□□□ 0.22
UBE2D3-210ENST00000453744 LIG1P18858 919 aa16.42■□□□□ 0.22
UBE2D3-210ENST00000453744 KIF1BO60333 1816 aa16.41■□□□□ 0.22
UBE2D3-210ENST00000453744 CCAR2Q8N163 923 aaKnown RBP16.41■□□□□ 0.22
UBE2D3-210ENST00000453744 GLRX3O76003 335 aaKnown RBP16.41■□□□□ 0.22
UBE2D3-210ENST00000453744 PSMA5P28066 241 aa16.41■□□□□ 0.22
UBE2D3-210ENST00000453744 PTPN14Q15678 1187 aa16.41■□□□□ 0.22
UBE2D3-210ENST00000453744 ZNF710Q8N1W2 664 aa16.41■□□□□ 0.22
UBE2D3-210ENST00000453744 GTPBP4Q9BZE4 634 aaKnown RBP16.41■□□□□ 0.22
UBE2D3-210ENST00000453744 IL25Q9H293 177 aa16.41■□□□□ 0.22
UBE2D3-210ENST00000453744 PA2G4Q9UQ80 394 aaKnown RBP16.41■□□□□ 0.22
UBE2D3-210ENST00000453744 TET3O43151 1660 aa16.4■□□□□ 0.22
UBE2D3-210ENST00000453744 SGSM2O43147 1006 aa16.4■□□□□ 0.22
UBE2D3-210ENST00000453744 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
UBE2D3-210ENST00000453744 KIAA1524Q8TCG1 905 aa16.4■□□□□ 0.22
UBE2D3-210ENST00000453744 SMC2O95347 1197 aa16.4■□□□□ 0.22
UBE2D3-210ENST00000453744 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
UBE2D3-210ENST00000453744 PI4KAP2A4QPH2 592 aa16.4■□□□□ 0.22
UBE2D3-210ENST00000453744 GNL2Q13823 731 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-210ENST00000453744 PI4KAP1Q8N8J0 262 aa16.4■□□□□ 0.22
UBE2D3-210ENST00000453744 SYTL4Q96C24 671 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-210ENST00000453744 LRRC7Q96NW7 1537 aa16.39■□□□□ 0.21
UBE2D3-210ENST00000453744 TULP4Q9NRJ4 1543 aa16.39■□□□□ 0.21
UBE2D3-210ENST00000453744 KINO60870 393 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-210ENST00000453744 CEP135Q66GS9 1140 aa16.39■□□□□ 0.21
UBE2D3-210ENST00000453744 FAM177A1Q8N128 213 aaPredicted RBP16.39■□□□□ 0.21
UBE2D3-210ENST00000453744 LRRC2Q9BYS8 371 aa16.39■□□□□ 0.21
UBE2D3-210ENST00000453744 OSBPL3Q9H4L5 887 aa16.39■□□□□ 0.21
UBE2D3-210ENST00000453744 SH2B1Q9NRF2 756 aaPredicted RBP16.39■□□□□ 0.21
UBE2D3-210ENST00000453744 HDGFP51858 240 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-210ENST00000453744 ADCK5Q3MIX3 580 aa16.39■□□□□ 0.21
UBE2D3-210ENST00000453744 CDC37L1Q7L3B6 337 aa16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 ZBTB9Q96C00 473 aa16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 CBX8Q9HC52 389 aa16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 RBM8AQ9Y5S9 174 aaKnown RBP16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 SHPRHQ149N8 1683 aa16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 QRICH2Q9H0J4 1663 aa16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 BBXQ8WY36 941 aaPredicted RBP16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 DNAJC2Q99543 621 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms