RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 NFIXQ14938 502 aa29.87■■■□□ 2.37
TNFRSF25-208ENST00000453341 GLTPD2A6NH11 291 aa29.86■■■□□ 2.37
TNFRSF25-208ENST00000453341 LMNB1P20700 586 aa29.86■■■□□ 2.37
TNFRSF25-208ENST00000453341 CCDC88AQ3V6T2 1871 aa29.86■■■□□ 2.37
TNFRSF25-208ENST00000453341 TIAM2Q8IVF5 1701 aa29.85■■■□□ 2.37
TNFRSF25-208ENST00000453341 SULT6B1Q6IMI4 303 aa29.85■■■□□ 2.37
TNFRSF25-208ENST00000453341 VEGFAP15692 232 aaPredicted RBP29.84■■■□□ 2.37
TNFRSF25-208ENST00000453341 HSPA1AP0DMV8 641 aaKnown RBP29.83■■■□□ 2.37
TNFRSF25-208ENST00000453341 HSPA1BP0DMV9 641 aaKnown RBP29.83■■■□□ 2.37
TNFRSF25-208ENST00000453341 CYP19A1P11511 503 aaPredicted RBP29.83■■■□□ 2.37
TNFRSF25-208ENST00000453341 BCL2L12Q9HB09 334 aa29.83■■■□□ 2.37
TNFRSF25-208ENST00000453341 SLC52A2Q9HAB3 445 aa29.82■■■□□ 2.36
TNFRSF25-208ENST00000453341 NARFQ9UHQ1 456 aa29.82■■■□□ 2.36
TNFRSF25-208ENST00000453341 COL15A1P39059 1388 aa29.81■■■□□ 2.36
TNFRSF25-208ENST00000453341 PANK3Q9H999 370 aa29.81■■■□□ 2.36
TNFRSF25-208ENST00000453341 LGR6Q9HBX8 967 aa29.81■■■□□ 2.36
TNFRSF25-208ENST00000453341 CARMIL3Q8ND23 1372 aa29.8■■■□□ 2.36
TNFRSF25-208ENST00000453341 SLC39A6Q13433 755 aa29.8■■■□□ 2.36
TNFRSF25-208ENST00000453341 TTLL6Q8N841 843 aa29.8■■■□□ 2.36
TNFRSF25-208ENST00000453341 ZBTB1Q9Y2K1 713 aa29.8■■■□□ 2.36
TNFRSF25-208ENST00000453341 MRC1P22897 1456 aa29.8■■■□□ 2.36
TNFRSF25-208ENST00000453341 POTECB2RU33 542 aa29.79■■■□□ 2.36
TNFRSF25-208ENST00000453341 NFKBIEO00221 500 aa29.79■■■□□ 2.36
TNFRSF25-208ENST00000453341 SERPINB2P05120 415 aa29.79■■■□□ 2.36
TNFRSF25-208ENST00000453341 IL13P35225 146 aa29.78■■■□□ 2.36
TNFRSF25-208ENST00000453341 AKAP4Q5JQC9 854 aa29.78■■■□□ 2.36
TNFRSF25-208ENST00000453341 VIRMAQ69YN4 1812 aaKnown RBP29.78■■■□□ 2.36
TNFRSF25-208ENST00000453341 C2CD5Q86YS7 1000 aa29.77■■■□□ 2.36
TNFRSF25-208ENST00000453341 MORC1Q86VD1 984 aa29.76■■■□□ 2.35
TNFRSF25-208ENST00000453341 RNMTO43148 476 aaKnown RBP29.73■■■□□ 2.35
TNFRSF25-208ENST00000453341 ANKRD31Q8N7Z5 1873 aa29.72■■■□□ 2.35
TNFRSF25-208ENST00000453341 H0YIN7 160 aa29.71■■■□□ 2.35
TNFRSF25-208ENST00000453341 DICER1Q9UPY3 1922 aaKnown RBP29.7■■■□□ 2.34
TNFRSF25-208ENST00000453341 BICDL1Q6ZP65 573 aa29.69■■■□□ 2.34
TNFRSF25-208ENST00000453341 TIMELESSQ9UNS1 1208 aa29.69■■■□□ 2.34
TNFRSF25-208ENST00000453341 UBR2Q8IWV8 1755 aa29.69■■■□□ 2.34
TNFRSF25-208ENST00000453341 FER1L6Q2WGJ9 1857 aa29.68■■■□□ 2.34
TNFRSF25-208ENST00000453341 CANXP27824 592 aaKnown RBP29.68■■■□□ 2.34
TNFRSF25-208ENST00000453341 COL11A2P13942 1736 aaPredicted RBP29.68■■■□□ 2.34
TNFRSF25-208ENST00000453341 DPY19L2Q6NUT2 758 aa29.66■■■□□ 2.34
TNFRSF25-208ENST00000453341 VSIG10Q8N0Z9 540 aa29.66■■■□□ 2.34
TNFRSF25-208ENST00000453341 ZNF219Q9P2Y4 722 aaPredicted RBP29.65■■■□□ 2.34
TNFRSF25-208ENST00000453341 C21orf2O43822 256 aa29.64■■■□□ 2.34
TNFRSF25-208ENST00000453341 HMOX1P09601 288 aa29.64■■■□□ 2.34
TNFRSF25-208ENST00000453341 HSPA5P11021 654 aaKnown RBP29.64■■■□□ 2.34
TNFRSF25-208ENST00000453341 EIF5P55010 431 aaKnown RBP29.64■■■□□ 2.34
TNFRSF25-208ENST00000453341 TBC1D9BQ66K14 1250 aa29.64■■■□□ 2.34
TNFRSF25-208ENST00000453341 ZNF622Q969S3 477 aaKnown RBP eCLIP29.64■■■□□ 2.34
TNFRSF25-208ENST00000453341 MTHFSDQ2M296 383 aaKnown RBP29.63■■■□□ 2.33
TNFRSF25-208ENST00000453341 ERFEQ4G0M1 354 aa29.63■■■□□ 2.33
TNFRSF25-208ENST00000453341 CCDC24Q8N4L8 307 aa29.63■■■□□ 2.33
TNFRSF25-208ENST00000453341 SCN7AQ01118 1682 aa29.63■■■□□ 2.33
TNFRSF25-208ENST00000453341 POTEIP0CG38 1075 aa29.62■■■□□ 2.33
TNFRSF25-208ENST00000453341 POTEJP0CG39 1038 aa29.62■■■□□ 2.33
TNFRSF25-208ENST00000453341 CREBZFQ9NS37 354 aa29.62■■■□□ 2.33
TNFRSF25-208ENST00000453341 MKRN1Q9UHC7 482 aaKnown RBP29.62■■■□□ 2.33
TNFRSF25-208ENST00000453341 CHADLQ6NUI6 762 aa29.61■■■□□ 2.33
TNFRSF25-208ENST00000453341 BRIP1Q9BX63 1249 aa29.61■■■□□ 2.33
TNFRSF25-208ENST00000453341 EIF4G2P78344 907 aaKnown RBP eCLIP29.6■■■□□ 2.33
TNFRSF25-208ENST00000453341 PRR5LQ6MZQ0 368 aa29.6■■■□□ 2.33
TNFRSF25-208ENST00000453341 DDNO94850 711 aaPredicted RBP29.58■■■□□ 2.33
TNFRSF25-208ENST00000453341 PDE6BP35913 854 aa29.58■■■□□ 2.33
TNFRSF25-208ENST00000453341 SLX4Q8IY92 1834 aa29.58■■■□□ 2.33
TNFRSF25-208ENST00000453341 LTBP3Q9NS15 1303 aa29.58■■■□□ 2.33
TNFRSF25-208ENST00000453341 KNSTRNQ9Y448 316 aa29.58■■■□□ 2.33
TNFRSF25-208ENST00000453341 A0A087WZG4 1122 aa29.57■■■□□ 2.32
TNFRSF25-208ENST00000453341 STARD3NLO95772 234 aa29.57■■■□□ 2.32
TNFRSF25-208ENST00000453341 PDZRN3Q9UPQ7 1066 aa29.57■■■□□ 2.32
TNFRSF25-208ENST00000453341 AMER1Q5JTC6 1135 aaPredicted RBP29.56■■■□□ 2.32
TNFRSF25-208ENST00000453341 TAOK3Q9H2K8 898 aa29.56■■■□□ 2.32
TNFRSF25-208ENST00000453341 CACNA1SQ13698 1873 aa29.56■■■□□ 2.32
TNFRSF25-208ENST00000453341 TBC1D2BQ9UPU7 963 aa29.55■■■□□ 2.32
TNFRSF25-208ENST00000453341 FOXN1O15353 648 aa29.54■■■□□ 2.32
TNFRSF25-208ENST00000453341 ZNF496Q96IT1 587 aaPredicted RBP29.54■■■□□ 2.32
TNFRSF25-208ENST00000453341 TTC5Q8N0Z6 440 aa29.53■■■□□ 2.32
TNFRSF25-208ENST00000453341 CNTNAP1P78357 1384 aa29.52■■■□□ 2.32
TNFRSF25-208ENST00000453341 ZNF330Q9Y3S2 320 aaPredicted RBP29.52■■■□□ 2.32
TNFRSF25-208ENST00000453341 ARFGEF2Q9Y6D5 1785 aa29.52■■■□□ 2.32
TNFRSF25-208ENST00000453341 HEG1Q9ULI3 1381 aa29.52■■■□□ 2.32
TNFRSF25-208ENST00000453341 PASKQ96RG2 1323 aa29.51■■■□□ 2.32
TNFRSF25-208ENST00000453341 PRPF40BQ6NWY9 871 aaKnown RBP29.5■■■□□ 2.31
TNFRSF25-208ENST00000453341 SIPA1L3O60292 1781 aaPredicted RBP29.49■■■□□ 2.31
TNFRSF25-208ENST00000453341 TRIM26Q12899 539 aaPredicted RBP29.49■■■□□ 2.31
TNFRSF25-208ENST00000453341 STYK1Q6J9G0 422 aa29.49■■■□□ 2.31
TNFRSF25-208ENST00000453341 ZNF790Q6PG37 636 aa29.49■■■□□ 2.31
TNFRSF25-208ENST00000453341 CNBD1Q8NA66 436 aa29.49■■■□□ 2.31
TNFRSF25-208ENST00000453341 CNKSR1Q969H4 720 aa29.49■■■□□ 2.31
TNFRSF25-208ENST00000453341 CAMTA2O94983 1202 aa29.48■■■□□ 2.31
TNFRSF25-208ENST00000453341 SRGNP10124 158 aa29.48■■■□□ 2.31
TNFRSF25-208ENST00000453341 IL6STP40189 918 aaPredicted RBP29.48■■■□□ 2.31
TNFRSF25-208ENST00000453341 IL17REQ8NFR9 667 aa29.47■■■□□ 2.31
TNFRSF25-208ENST00000453341 SCN4AP35499 1836 aa29.47■■■□□ 2.31
TNFRSF25-208ENST00000453341 BCORQ6W2J9 1755 aa29.47■■■□□ 2.31
TNFRSF25-208ENST00000453341 LDHDQ86WU2 507 aa29.46■■■□□ 2.31
TNFRSF25-208ENST00000453341 L3MBTL3Q96JM7 780 aaPredicted RBP29.46■■■□□ 2.31
TNFRSF25-208ENST00000453341 SETDB2Q96T68 719 aa29.46■■■□□ 2.31
TNFRSF25-208ENST00000453341 DIAPH1O60610 1272 aaKnown RBP29.45■■■□□ 2.31
TNFRSF25-208ENST00000453341 A1BGP04217 495 aa29.45■■■□□ 2.31
TNFRSF25-208ENST00000453341 TEX13AQ9BXU3 409 aaPredicted RBP29.45■■■□□ 2.31
TNFRSF25-208ENST00000453341 TAF1DQ9H5J8 278 aaPredicted RBP29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms