RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 ZNF831Q5JPB2 1677 aa20.54■□□□□ 0.88
VCX3B-204ENST00000453306 CNTNAP4Q9C0A0 1308 aa20.53■□□□□ 0.88
VCX3B-204ENST00000453306 RFC4P35249 363 aa20.53■□□□□ 0.88
VCX3B-204ENST00000453306 SLC39A6Q13433 755 aa20.53■□□□□ 0.88
VCX3B-204ENST00000453306 IFFO2Q5TF58 517 aa20.53■□□□□ 0.88
VCX3B-204ENST00000453306 SPINK5Q9NQ38 1064 aaPredicted RBP20.53■□□□□ 0.88
VCX3B-204ENST00000453306 MRC1P22897 1456 aa20.53■□□□□ 0.88
VCX3B-204ENST00000453306 TGFB2P61812 414 aa20.52■□□□□ 0.88
VCX3B-204ENST00000453306 RPS6KA4O75676 772 aa20.51■□□□□ 0.87
VCX3B-204ENST00000453306 ARHGEF1Q92888 912 aaKnown RBP20.51■□□□□ 0.87
VCX3B-204ENST00000453306 ADCY9O60503 1353 aa20.5■□□□□ 0.87
VCX3B-204ENST00000453306 ZNF853P0CG23 659 aa20.5■□□□□ 0.87
VCX3B-204ENST00000453306 LMOD3Q0VAK6 560 aa20.5■□□□□ 0.87
VCX3B-204ENST00000453306 TAF7Q15545 349 aaPredicted RBP20.5■□□□□ 0.87
VCX3B-204ENST00000453306 SLC4A9Q96Q91 983 aa20.5■□□□□ 0.87
VCX3B-204ENST00000453306 CCDC87Q9NVE4 849 aa20.5■□□□□ 0.87
VCX3B-204ENST00000453306 WWC3Q9ULE0 1092 aa20.5■□□□□ 0.87
VCX3B-204ENST00000453306 DLG5Q8TDM6 1919 aa20.49■□□□□ 0.87
VCX3B-204ENST00000453306 TEFQ10587 303 aa20.49■□□□□ 0.87
VCX3B-204ENST00000453306 SCN11AQ9UI33 1791 aa20.49■□□□□ 0.87
VCX3B-204ENST00000453306 CHL1O00533 1208 aa20.48■□□□□ 0.87
VCX3B-204ENST00000453306 PTCD1O75127 700 aaKnown RBP20.48■□□□□ 0.87
VCX3B-204ENST00000453306 HNRNPUQ00839 825 aaKnown RBP eCLIP20.48■□□□□ 0.87
VCX3B-204ENST00000453306 PARP3Q9Y6F1 533 aa20.48■□□□□ 0.87
VCX3B-204ENST00000453306 GYS1P13807 737 aa20.47■□□□□ 0.87
VCX3B-204ENST00000453306 ZNF526Q8TF50 670 aaPredicted RBP20.47■□□□□ 0.87
VCX3B-204ENST00000453306 BTBD11A6QL63 1104 aa20.46■□□□□ 0.87
VCX3B-204ENST00000453306 CDCA7LQ96GN5 454 aa20.46■□□□□ 0.87
VCX3B-204ENST00000453306 CEP350Q5VT06 3117 aa20.46■□□□□ 0.87
VCX3B-204ENST00000453306 CICQ96RK0 1608 aaPredicted RBP20.45■□□□□ 0.87
VCX3B-204ENST00000453306 PXDNLA1KZ92 1463 aa20.45■□□□□ 0.86
VCX3B-204ENST00000453306 COL5A3P25940 1745 aaPredicted RBP20.45■□□□□ 0.86
VCX3B-204ENST00000453306 ZNF790Q6PG37 636 aa20.45■□□□□ 0.86
VCX3B-204ENST00000453306 WDR63Q8IWG1 891 aa20.45■□□□□ 0.86
VCX3B-204ENST00000453306 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
VCX3B-204ENST00000453306 C10orf71Q711Q0 1435 aa20.44■□□□□ 0.86
VCX3B-204ENST00000453306 CRKLP46109 303 aaKnown RBP20.44■□□□□ 0.86
VCX3B-204ENST00000453306 ZNF496Q96IT1 587 aaPredicted RBP20.44■□□□□ 0.86
VCX3B-204ENST00000453306 CFAP44Q96MT7 982 aa20.44■□□□□ 0.86
VCX3B-204ENST00000453306 BCS1LQ9Y276 419 aa20.44■□□□□ 0.86
VCX3B-204ENST00000453306 LAS1LQ9Y4W2 734 aaKnown RBP20.44■□□□□ 0.86
VCX3B-204ENST00000453306 A0A0G2JLW4 131 aa20.43■□□□□ 0.86
VCX3B-204ENST00000453306 KRT24Q2M2I5 525 aa20.43■□□□□ 0.86
VCX3B-204ENST00000453306 MBIPQ9NS73 344 aa20.43■□□□□ 0.86
VCX3B-204ENST00000453306 KIF13BQ9NQT8 1826 aa20.43■□□□□ 0.86
VCX3B-204ENST00000453306 PRAMEF22A3QJZ6 481 aa20.42■□□□□ 0.86
VCX3B-204ENST00000453306 EIF4A1P60842 406 aaKnown RBP20.42■□□□□ 0.86
VCX3B-204ENST00000453306 TSR2Q969E8 191 aaKnown RBP20.42■□□□□ 0.86
VCX3B-204ENST00000453306 IFT57Q9NWB7 429 aa20.42■□□□□ 0.86
VCX3B-204ENST00000453306 IL16Q14005 1332 aa20.42■□□□□ 0.86
VCX3B-204ENST00000453306 C4AP0C0L4 1744 aa20.41■□□□□ 0.86
VCX3B-204ENST00000453306 TSPYL4Q9UJ04 414 aa20.41■□□□□ 0.86
VCX3B-204ENST00000453306 KCPQ6ZWJ8 1503 aa20.41■□□□□ 0.86
VCX3B-204ENST00000453306 SIPA1L3O60292 1781 aaPredicted RBP20.41■□□□□ 0.86
VCX3B-204ENST00000453306 ARHGAP27Q6ZUM4 889 aa20.4■□□□□ 0.86
VCX3B-204ENST00000453306 BABAM1Q9NWV8 329 aa20.4■□□□□ 0.86
VCX3B-204ENST00000453306 HEG1Q9ULI3 1381 aa20.4■□□□□ 0.86
VCX3B-204ENST00000453306 USP42Q9H9J4 1324 aaKnown RBP20.39■□□□□ 0.85
VCX3B-204ENST00000453306 DPEP1P16444 411 aa20.39■□□□□ 0.85
VCX3B-204ENST00000453306 SLFN5Q08AF3 891 aa20.39■□□□□ 0.85
VCX3B-204ENST00000453306 TRMT2AQ8IZ69 625 aaKnown RBP20.39■□□□□ 0.85
VCX3B-204ENST00000453306 ZPR1O75312 459 aa20.38■□□□□ 0.85
VCX3B-204ENST00000453306 HSPA6P17066 643 aa20.38■□□□□ 0.85
VCX3B-204ENST00000453306 GNAI1P63096 354 aa20.38■□□□□ 0.85
VCX3B-204ENST00000453306 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
VCX3B-204ENST00000453306 N4BP2Q86UW6 1770 aaPredicted RBP20.37■□□□□ 0.85
VCX3B-204ENST00000453306 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
VCX3B-204ENST00000453306 GOLGA2Q08379 1002 aa20.37■□□□□ 0.85
VCX3B-204ENST00000453306 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
VCX3B-204ENST00000453306 PIM2Q9P1W9 311 aa20.37■□□□□ 0.85
VCX3B-204ENST00000453306 SRP68Q9UHB9 627 aaKnown RBP20.37■□□□□ 0.85
VCX3B-204ENST00000453306 KIAA1551Q9HCM1 1747 aa20.36■□□□□ 0.85
VCX3B-204ENST00000453306 ZBED9Q6R2W3 1325 aa20.36■□□□□ 0.85
VCX3B-204ENST00000453306 FANCIQ9NVI1 1328 aa20.36■□□□□ 0.85
VCX3B-204ENST00000453306 FKBP8Q14318 412 aa20.36■□□□□ 0.85
VCX3B-204ENST00000453306 INTS5Q6P9B9 1019 aaKnown RBP20.36■□□□□ 0.85
VCX3B-204ENST00000453306 DNAJC10Q8IXB1 793 aa20.36■□□□□ 0.85
VCX3B-204ENST00000453306 TSPYL6Q8N831 410 aa20.36■□□□□ 0.85
VCX3B-204ENST00000453306 MYH14Q7Z406 1995 aaKnown RBP20.35■□□□□ 0.85
VCX3B-204ENST00000453306 VIRMAQ69YN4 1812 aaKnown RBP20.35■□□□□ 0.85
VCX3B-204ENST00000453306 TTC5Q8N0Z6 440 aa20.35■□□□□ 0.85
VCX3B-204ENST00000453306 USP16Q9Y5T5 823 aa20.35■□□□□ 0.85
VCX3B-204ENST00000453306 TJP1Q07157 1748 aa20.34■□□□□ 0.85
VCX3B-204ENST00000453306 KIF3CO14782 793 aa20.34■□□□□ 0.85
VCX3B-204ENST00000453306 DALRD3Q5D0E6 543 aaKnown RBP20.34■□□□□ 0.85
VCX3B-204ENST00000453306 FMNL2Q96PY5 1086 aa20.34■□□□□ 0.85
VCX3B-204ENST00000453306 KCNA3P22001 575 aa20.33■□□□□ 0.85
VCX3B-204ENST00000453306 DUSP27Q5VZP5 1158 aa20.33■□□□□ 0.85
VCX3B-204ENST00000453306 VSIG10Q8N0Z9 540 aa20.33■□□□□ 0.85
VCX3B-204ENST00000453306 SOS1Q07889 1333 aaPredicted RBP20.32■□□□□ 0.84
VCX3B-204ENST00000453306 E9PSI1 815 aa20.32■□□□□ 0.84
VCX3B-204ENST00000453306 ELL2O00472 640 aaPredicted RBP20.32■□□□□ 0.84
VCX3B-204ENST00000453306 CYP19A1P11511 503 aaPredicted RBP20.32■□□□□ 0.84
VCX3B-204ENST00000453306 EXOSC9Q06265 439 aaKnown RBP20.32■□□□□ 0.84
VCX3B-204ENST00000453306 DDR1Q08345 913 aa20.32■□□□□ 0.84
VCX3B-204ENST00000453306 USPL1Q5W0Q7 1092 aa20.32■□□□□ 0.84
VCX3B-204ENST00000453306 KDM3BQ7LBC6 1761 aa20.31■□□□□ 0.84
VCX3B-204ENST00000453306 POLRMTO00411 1230 aaKnown RBP20.31■□□□□ 0.84
VCX3B-204ENST00000453306 TM4SF1P30408 202 aa20.31■□□□□ 0.84
VCX3B-204ENST00000453306 TOMM70O94826 608 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms