RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 SPATA31A1Q5TZJ5 1347 aa30.82■■■□□ 2.52
MCF2L-219ENST00000453297 ADCY9O60503 1353 aa30.82■■■□□ 2.52
MCF2L-219ENST00000453297 SLIT2O94813 1529 aa30.82■■■□□ 2.52
MCF2L-219ENST00000453297 LAMB4A4D0S4 1761 aa30.82■■■□□ 2.52
MCF2L-219ENST00000453297 JCADQ9P266 1359 aa30.81■■■□□ 2.52
MCF2L-219ENST00000453297 GNAI3P08754 354 aa30.81■■■□□ 2.52
MCF2L-219ENST00000453297 NUCB1Q02818 461 aa30.81■■■□□ 2.52
MCF2L-219ENST00000453297 USP16Q9Y5T5 823 aa30.81■■■□□ 2.52
MCF2L-219ENST00000453297 EXOC5O00471 708 aa30.8■■■□□ 2.52
MCF2L-219ENST00000453297 SRCIN1Q9C0H9 1055 aa30.8■■■□□ 2.52
MCF2L-219ENST00000453297 THRAP3Q9Y2W1 955 aaKnown RBP30.8■■■□□ 2.52
MCF2L-219ENST00000453297 KCPQ6ZWJ8 1503 aa30.79■■■□□ 2.52
MCF2L-219ENST00000453297 GNAI2P04899 355 aa30.78■■■□□ 2.52
MCF2L-219ENST00000453297 FAM161AQ3B820 660 aa30.78■■■□□ 2.52
MCF2L-219ENST00000453297 CDCA7Q9BWT1 371 aaPredicted RBP30.78■■■□□ 2.52
MCF2L-219ENST00000453297 BEND3Q5T5X7 828 aa30.77■■■□□ 2.52
MCF2L-219ENST00000453297 KSR2Q6VAB6 950 aa30.77■■■□□ 2.52
MCF2L-219ENST00000453297 USP44Q9H0E7 712 aa30.77■■■□□ 2.52
MCF2L-219ENST00000453297 TMOD3Q9NYL9 352 aa30.77■■■□□ 2.52
MCF2L-219ENST00000453297 ITGB4P16144 1822 aa30.77■■■□□ 2.52
MCF2L-219ENST00000453297 TNS2Q63HR2 1409 aa30.76■■■□□ 2.51
MCF2L-219ENST00000453297 DCTPP1Q9H773 170 aa30.76■■■□□ 2.51
MCF2L-219ENST00000453297 SPATA31A5Q5VU36 1347 aa30.76■■■□□ 2.51
MCF2L-219ENST00000453297 SPATA31A7Q8IWB4 1347 aa30.76■■■□□ 2.51
MCF2L-219ENST00000453297 CHD1LQ86WJ1 897 aa30.75■■■□□ 2.51
MCF2L-219ENST00000453297 MAP3K2Q9Y2U5 619 aa30.75■■■□□ 2.51
MCF2L-219ENST00000453297 LRP6O75581 1613 aa30.75■■■□□ 2.51
MCF2L-219ENST00000453297 C8orf34Q49A92 452 aa30.75■■■□□ 2.51
MCF2L-219ENST00000453297 DDX58O95786 925 aaKnown RBP30.74■■■□□ 2.51
MCF2L-219ENST00000453297 MYL6BP14649 208 aa30.74■■■□□ 2.51
MCF2L-219ENST00000453297 ANKRD45Q5TZF3 282 aa30.73■■■□□ 2.51
MCF2L-219ENST00000453297 LNPKQ9C0E8 428 aa30.73■■■□□ 2.51
MCF2L-219ENST00000453297 AIMP1Q12904 312 aaKnown RBP30.72■■■□□ 2.51
MCF2L-219ENST00000453297 LRP10Q7Z4F1 713 aa30.72■■■□□ 2.51
MCF2L-219ENST00000453297 PIGBQ92521 554 aa30.71■■■□□ 2.51
MCF2L-219ENST00000453297 PTCD1O75127 700 aaKnown RBP30.7■■■□□ 2.5
MCF2L-219ENST00000453297 HMMRO75330 724 aa30.7■■■□□ 2.5
MCF2L-219ENST00000453297 UBTFL1P0CB47 393 aaPredicted RBP30.7■■■□□ 2.5
MCF2L-219ENST00000453297 XAGE3Q8WTP9 111 aa30.7■■■□□ 2.5
MCF2L-219ENST00000453297 UNC5CLQ8IV45 518 aa30.69■■■□□ 2.5
MCF2L-219ENST00000453297 ALDH1L1O75891 902 aa30.68■■■□□ 2.5
MCF2L-219ENST00000453297 COPS6Q7L5N1 327 aa30.68■■■□□ 2.5
MCF2L-219ENST00000453297 CCDC9Q9Y3X0 531 aaKnown RBP30.68■■■□□ 2.5
MCF2L-219ENST00000453297 LRRFIP2Q9Y608 721 aaKnown RBP30.68■■■□□ 2.5
MCF2L-219ENST00000453297 ERBB4Q15303 1308 aa30.68■■■□□ 2.5
MCF2L-219ENST00000453297 DDB1Q16531 1140 aa30.68■■■□□ 2.5
MCF2L-219ENST00000453297 BARGINQ6ZT62 677 aa30.68■■■□□ 2.5
MCF2L-219ENST00000453297 PIP4K2AP48426 406 aaPredicted RBP30.67■■■□□ 2.5
MCF2L-219ENST00000453297 ATP8B2P98198 1209 aa30.67■■■□□ 2.5
MCF2L-219ENST00000453297 NGLY1Q96IV0 654 aa30.67■■■□□ 2.5
MCF2L-219ENST00000453297 C8orf37Q96NL8 207 aa30.67■■■□□ 2.5
MCF2L-219ENST00000453297 ASAP1Q9ULH1 1129 aa30.66■■■□□ 2.5
MCF2L-219ENST00000453297 SPATA31A6Q5VVP1 1343 aa30.66■■■□□ 2.5
MCF2L-219ENST00000453297 BCL9O00512 1426 aa30.66■■■□□ 2.5
MCF2L-219ENST00000453297 RIC3Q7Z5B4 369 aa30.66■■■□□ 2.5
MCF2L-219ENST00000453297 ATG3Q9NT62 314 aa30.65■■■□□ 2.5
MCF2L-219ENST00000453297 BCL9LQ86UU0 1499 aa30.65■■■□□ 2.5
MCF2L-219ENST00000453297 NBPF7P0C2Y1 421 aaPredicted RBP30.64■■■□□ 2.5
MCF2L-219ENST00000453297 LINS1Q8NG48 757 aa30.64■■■□□ 2.5
MCF2L-219ENST00000453297 DOT1LQ8TEK3 1739 aa30.64■■■□□ 2.5
MCF2L-219ENST00000453297 NBPF26B4DH59 902 aa30.63■■■□□ 2.49
MCF2L-219ENST00000453297 NBPF14Q5TI25 921 aa30.63■■■□□ 2.49
MCF2L-219ENST00000453297 NBPF10Q6P3W6 841 aaKnown RBP30.63■■■□□ 2.49
MCF2L-219ENST00000453297 NBPF15Q8N660 670 aa30.63■■■□□ 2.49
MCF2L-219ENST00000453297 ANKRD13DQ6ZTN6 518 aa30.62■■■□□ 2.49
MCF2L-219ENST00000453297 PNMA6EA0A0J9YXQ4 647 aa30.61■■■□□ 2.49
MCF2L-219ENST00000453297 VPS72Q15906 364 aa30.61■■■□□ 2.49
MCF2L-219ENST00000453297 CWF19L2Q2TBE0 894 aaKnown RBP30.61■■■□□ 2.49
MCF2L-219ENST00000453297 FNBP4Q8N3X1 1017 aaPredicted RBP30.61■■■□□ 2.49
MCF2L-219ENST00000453297 KAT6BQ8WYB5 2073 aa30.61■■■□□ 2.49
MCF2L-219ENST00000453297 VSIG10Q8N0Z9 540 aa30.61■■■□□ 2.49
MCF2L-219ENST00000453297 ARFGEF2Q9Y6D5 1785 aa30.6■■■□□ 2.49
MCF2L-219ENST00000453297 METTL22Q9BUU2 404 aaPredicted RBP30.6■■■□□ 2.49
MCF2L-219ENST00000453297 A1BGP04217 495 aa30.59■■■□□ 2.49
MCF2L-219ENST00000453297 MARCH10Q8NA82 808 aaPredicted RBP30.59■■■□□ 2.49
MCF2L-219ENST00000453297 C9orf78Q9NZ63 289 aaPredicted RBP30.59■■■□□ 2.49
MCF2L-219ENST00000453297 IGKV5-2P06315 115 aa30.58■■■□□ 2.49
MCF2L-219ENST00000453297 NEXNQ0ZGT2 675 aa30.58■■■□□ 2.49
MCF2L-219ENST00000453297 TEX13AQ9BXU3 409 aaPredicted RBP30.58■■■□□ 2.49
MCF2L-219ENST00000453297 IBTKQ9P2D0 1353 aaPredicted RBP30.58■■■□□ 2.49
MCF2L-219ENST00000453297 PRIM1P49642 420 aaKnown RBP30.57■■■□□ 2.48
MCF2L-219ENST00000453297 SYTL4Q96C24 671 aaPredicted RBP30.57■■■□□ 2.48
MCF2L-219ENST00000453297 ZBTB47Q9UFB7 747 aaPredicted RBP30.57■■■□□ 2.48
MCF2L-219ENST00000453297 HSPA1LP34931 641 aa30.57■■■□□ 2.48
MCF2L-219ENST00000453297 SSH3Q8TE77 659 aa30.57■■■□□ 2.48
MCF2L-219ENST00000453297 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.56■■■□□ 2.48
MCF2L-219ENST00000453297 MYD88Q99836 296 aa30.56■■■□□ 2.48
MCF2L-219ENST00000453297 RBM42Q9BTD8 480 aaKnown RBP30.56■■■□□ 2.48
MCF2L-219ENST00000453297 UTYO14607 1347 aa30.55■■■□□ 2.48
MCF2L-219ENST00000453297 PLBD2Q8NHP8 589 aa30.55■■■□□ 2.48
MCF2L-219ENST00000453297 PPP1R42Q7Z4L9 355 aa30.54■■■□□ 2.48
MCF2L-219ENST00000453297 DNAJC10Q8IXB1 793 aa30.54■■■□□ 2.48
MCF2L-219ENST00000453297 NEURL1BA8MQ27 555 aa30.54■■■□□ 2.48
MCF2L-219ENST00000453297 GRM8O00222 908 aa30.54■■■□□ 2.48
MCF2L-219ENST00000453297 FAM98CQ17RN3 349 aaKnown RBP30.54■■■□□ 2.48
MCF2L-219ENST00000453297 HDAC5Q9UQL6 1122 aa30.54■■■□□ 2.48
MCF2L-219ENST00000453297 APBB1O00213 710 aa30.53■■■□□ 2.48
MCF2L-219ENST00000453297 POLA2Q14181 598 aa30.53■■■□□ 2.48
MCF2L-219ENST00000453297 EXOC6BQ9Y2D4 811 aa30.53■■■□□ 2.48
MCF2L-219ENST00000453297 AFDNP55196 1824 aaKnown RBP30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms