RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 PIM2Q9P1W9 311 aa24.63■■□□□ 1.53
TNFRSF25-207ENST00000453260 KIAA1551Q9HCM1 1747 aa24.63■■□□□ 1.53
TNFRSF25-207ENST00000453260 DDR1Q08345 913 aa24.62■■□□□ 1.53
TNFRSF25-207ENST00000453260 ZNF790Q6PG37 636 aa24.62■■□□□ 1.53
TNFRSF25-207ENST00000453260 ZNF526Q8TF50 670 aaPredicted RBP24.62■■□□□ 1.53
TNFRSF25-207ENST00000453260 ZBTB1Q9Y2K1 713 aa24.62■■□□□ 1.53
TNFRSF25-207ENST00000453260 POLRMTO00411 1230 aaKnown RBP24.61■■□□□ 1.53
TNFRSF25-207ENST00000453260 PRKAR2BP31323 418 aa24.61■■□□□ 1.53
TNFRSF25-207ENST00000453260 COL15A1P39059 1388 aa24.61■■□□□ 1.53
TNFRSF25-207ENST00000453260 A0A087WZG4 1122 aa24.6■■□□□ 1.53
TNFRSF25-207ENST00000453260 CANXP27824 592 aaKnown RBP24.6■■□□□ 1.53
TNFRSF25-207ENST00000453260 UBR2Q8IWV8 1755 aa24.59■■□□□ 1.53
TNFRSF25-207ENST00000453260 U2AF1L5P0DN76 240 aaPredicted RBP24.59■■□□□ 1.53
TNFRSF25-207ENST00000453260 KCNA3P22001 575 aa24.59■■□□□ 1.53
TNFRSF25-207ENST00000453260 PPP2R1AP30153 589 aa24.59■■□□□ 1.53
TNFRSF25-207ENST00000453260 U2AF1Q01081 240 aaKnown RBP eCLIP24.59■■□□□ 1.53
TNFRSF25-207ENST00000453260 DALRD3Q5D0E6 543 aaKnown RBP24.59■■□□□ 1.53
TNFRSF25-207ENST00000453260 RSPH6AQ9H0K4 717 aa24.59■■□□□ 1.53
TNFRSF25-207ENST00000453260 ZNF496Q96IT1 587 aaPredicted RBP24.58■■□□□ 1.53
TNFRSF25-207ENST00000453260 PHACTR3Q96KR7 559 aa24.58■■□□□ 1.53
TNFRSF25-207ENST00000453260 NPM2Q86SE8 214 aaKnown RBP24.57■■□□□ 1.52
TNFRSF25-207ENST00000453260 FMNL2Q96PY5 1086 aa24.57■■□□□ 1.52
TNFRSF25-207ENST00000453260 BRCA1P38398 1863 aaKnown RBP24.57■■□□□ 1.52
TNFRSF25-207ENST00000453260 HEG1Q9ULI3 1381 aa24.56■■□□□ 1.52
TNFRSF25-207ENST00000453260 NFIXQ14938 502 aa24.56■■□□□ 1.52
TNFRSF25-207ENST00000453260 RTF1Q92541 710 aaKnown RBP24.56■■□□□ 1.52
TNFRSF25-207ENST00000453260 BTBD11A6QL63 1104 aa24.55■■□□□ 1.52
TNFRSF25-207ENST00000453260 EIF5P55010 431 aaKnown RBP24.55■■□□□ 1.52
TNFRSF25-207ENST00000453260 CEMIPQ8WUJ3 1361 aa24.54■■□□□ 1.52
TNFRSF25-207ENST00000453260 ARFGEF1Q9Y6D6 1849 aa24.54■■□□□ 1.52
TNFRSF25-207ENST00000453260 SIPA1L3O60292 1781 aaPredicted RBP24.53■■□□□ 1.52
TNFRSF25-207ENST00000453260 SERPINB2P05120 415 aa24.53■■□□□ 1.52
TNFRSF25-207ENST00000453260 CHRNA5P30532 468 aa24.53■■□□□ 1.52
TNFRSF25-207ENST00000453260 BCL2L12Q9HB09 334 aa24.52■■□□□ 1.52
TNFRSF25-207ENST00000453260 IL6STP40189 918 aaPredicted RBP24.51■■□□□ 1.51
TNFRSF25-207ENST00000453260 ZNF330Q9Y3S2 320 aaPredicted RBP24.51■■□□□ 1.51
TNFRSF25-207ENST00000453260 AFDNP55196 1824 aaKnown RBP24.51■■□□□ 1.51
TNFRSF25-207ENST00000453260 NEFMP07197 916 aa24.5■■□□□ 1.51
TNFRSF25-207ENST00000453260 HTATSF1O43719 755 aaKnown RBP24.49■■□□□ 1.51
TNFRSF25-207ENST00000453260 BICDL1Q6ZP65 573 aa24.49■■□□□ 1.51
TNFRSF25-207ENST00000453260 C9orf131Q5VYM1 1079 aa24.48■■□□□ 1.51
TNFRSF25-207ENST00000453260 A1BGP04217 495 aa24.47■■□□□ 1.51
TNFRSF25-207ENST00000453260 MCM10Q7L590 875 aa24.47■■□□□ 1.51
TNFRSF25-207ENST00000453260 TBC1D2BQ9UPU7 963 aa24.47■■□□□ 1.51
TNFRSF25-207ENST00000453260 H0YIN7 160 aa24.46■■□□□ 1.51
TNFRSF25-207ENST00000453260 KIF3CO14782 793 aa24.46■■□□□ 1.51
TNFRSF25-207ENST00000453260 KCNQ3O43525 872 aa24.46■■□□□ 1.51
TNFRSF25-207ENST00000453260 NRXN2Q9P2S2 1712 aa24.46■■□□□ 1.51
TNFRSF25-207ENST00000453260 CEP350Q5VT06 3117 aa24.46■■□□□ 1.51
TNFRSF25-207ENST00000453260 SNRPA1P09661 255 aaKnown RBP24.45■■□□□ 1.5
TNFRSF25-207ENST00000453260 TTLL6Q8N841 843 aa24.45■■□□□ 1.5
TNFRSF25-207ENST00000453260 PDZRN3Q9UPQ7 1066 aa24.45■■□□□ 1.5
TNFRSF25-207ENST00000453260 HSPA6P17066 643 aa24.44■■□□□ 1.5
TNFRSF25-207ENST00000453260 TBC1D9BQ66K14 1250 aa24.44■■□□□ 1.5
TNFRSF25-207ENST00000453260 C2CD5Q86YS7 1000 aa24.44■■□□□ 1.5
TNFRSF25-207ENST00000453260 SETDB2Q96T68 719 aa24.43■■□□□ 1.5
TNFRSF25-207ENST00000453260 RNF181Q9P0P0 153 aa24.43■■□□□ 1.5
TNFRSF25-207ENST00000453260 USP16Q9Y5T5 823 aa24.43■■□□□ 1.5
TNFRSF25-207ENST00000453260 PDE6BP35913 854 aa24.42■■□□□ 1.5
TNFRSF25-207ENST00000453260 TAF7Q15545 349 aaPredicted RBP24.42■■□□□ 1.5
TNFRSF25-207ENST00000453260 PNNQ9H307 717 aaKnown RBP24.42■■□□□ 1.5
TNFRSF25-207ENST00000453260 CARMIL3Q8ND23 1372 aa24.42■■□□□ 1.5
TNFRSF25-207ENST00000453260 NPHP1O15259 732 aa24.41■■□□□ 1.5
TNFRSF25-207ENST00000453260 TOMM70O94826 608 aa24.41■■□□□ 1.5
TNFRSF25-207ENST00000453260 DCTN1Q14203 1278 aa24.41■■□□□ 1.5
TNFRSF25-207ENST00000453260 DZIP3Q86Y13 1208 aaKnown RBP24.41■■□□□ 1.5
TNFRSF25-207ENST00000453260 BRIP1Q9BX63 1249 aa24.41■■□□□ 1.5
TNFRSF25-207ENST00000453260 KDM2BQ8NHM5 1336 aa24.4■■□□□ 1.5
TNFRSF25-207ENST00000453260 SBF1O95248 1867 aa24.39■■□□□ 1.5
TNFRSF25-207ENST00000453260 CAMTA2O94983 1202 aa24.39■■□□□ 1.49
TNFRSF25-207ENST00000453260 SCN7AQ01118 1682 aa24.38■■□□□ 1.49
TNFRSF25-207ENST00000453260 CLEC4GQ6UXB4 293 aa24.38■■□□□ 1.49
TNFRSF25-207ENST00000453260 C16orf71Q8IYS4 520 aaPredicted RBP24.38■■□□□ 1.49
TNFRSF25-207ENST00000453260 NMRK2Q9NPI5 230 aa24.38■■□□□ 1.49
TNFRSF25-207ENST00000453260 DLEC1Q9Y238 1755 aa24.38■■□□□ 1.49
TNFRSF25-207ENST00000453260 PRR5LQ6MZQ0 368 aa24.37■■□□□ 1.49
TNFRSF25-207ENST00000453260 CNBD1Q8NA66 436 aa24.37■■□□□ 1.49
TNFRSF25-207ENST00000453260 PNISRQ8TF01 805 aaKnown RBP24.37■■□□□ 1.49
TNFRSF25-207ENST00000453260 ZNF622Q969S3 477 aaKnown RBP eCLIP24.37■■□□□ 1.49
TNFRSF25-207ENST00000453260 ZNF652Q9Y2D9 606 aa24.37■■□□□ 1.49
TNFRSF25-207ENST00000453260 LMNB1P20700 586 aa24.36■■□□□ 1.49
TNFRSF25-207ENST00000453260 ST5P78524 1137 aa24.36■■□□□ 1.49
TNFRSF25-207ENST00000453260 PRAMEF22A3QJZ6 481 aa24.35■■□□□ 1.49
TNFRSF25-207ENST00000453260 ZC3H4Q9UPT8 1303 aaKnown RBP24.35■■□□□ 1.49
TNFRSF25-207ENST00000453260 PIP4K2AP48426 406 aaPredicted RBP24.34■■□□□ 1.49
TNFRSF25-207ENST00000453260 MAPK8IP3Q9UPT6 1336 aa24.34■■□□□ 1.49
TNFRSF25-207ENST00000453260 RASSF7Q02833 373 aa24.33■■□□□ 1.49
TNFRSF25-207ENST00000453260 RGL2O15211 777 aa24.32■■□□□ 1.48
TNFRSF25-207ENST00000453260 NFE2L2Q16236 605 aa24.32■■□□□ 1.48
TNFRSF25-207ENST00000453260 CCDC24Q8N4L8 307 aa24.32■■□□□ 1.48
TNFRSF25-207ENST00000453260 RBM46Q8TBY0 533 aaKnown RBP24.32■■□□□ 1.48
TNFRSF25-207ENST00000453260 PLEKHF1Q96S99 279 aa24.32■■□□□ 1.48
TNFRSF25-207ENST00000453260 MIS18AQ9NYP9 233 aa24.32■■□□□ 1.48
TNFRSF25-207ENST00000453260 DLG5Q8TDM6 1919 aa24.31■■□□□ 1.48
TNFRSF25-207ENST00000453260 APLP1P51693 650 aa24.31■■□□□ 1.48
TNFRSF25-207ENST00000453260 RALBP1Q15311 655 aa24.31■■□□□ 1.48
TNFRSF25-207ENST00000453260 NBPF5PQ86XG9 351 aaPredicted RBP24.31■■□□□ 1.48
TNFRSF25-207ENST00000453260 ANKRD31Q8N7Z5 1873 aa24.31■■□□□ 1.48
TNFRSF25-207ENST00000453260 CNKSR1Q969H4 720 aa24.31■■□□□ 1.48
TNFRSF25-207ENST00000453260 BCORQ6W2J9 1755 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms