RNA–Protein interactions for RNA: ENST00000453208.5

GGA1-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 5

Gene GGA1, Length 639 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-215ENST00000453208 CFAP53Q96M91 514 aa25■■□□□ 1.59
GGA1-215ENST00000453208 TM4SF1P30408 202 aa24.99■■□□□ 1.59
GGA1-215ENST00000453208 HSP90AB1P08238 724 aaKnown RBP24.98■■□□□ 1.59
GGA1-215ENST00000453208 DDX10Q13206 875 aaKnown RBP24.98■■□□□ 1.59
GGA1-215ENST00000453208 DNAJC10Q8IXB1 793 aa24.98■■□□□ 1.59
GGA1-215ENST00000453208 JMYQ8N9B5 988 aa24.98■■□□□ 1.59
GGA1-215ENST00000453208 ARFGEF1Q9Y6D6 1849 aa24.98■■□□□ 1.59
GGA1-215ENST00000453208 HMOX1P09601 288 aa24.96■■□□□ 1.59
GGA1-215ENST00000453208 USPL1Q5W0Q7 1092 aa24.96■■□□□ 1.59
GGA1-215ENST00000453208 LGR6Q9HBX8 967 aa24.95■■□□□ 1.58
GGA1-215ENST00000453208 U2SURPO15042 1029 aaKnown RBP24.94■■□□□ 1.58
GGA1-215ENST00000453208 BCL2L12Q9HB09 334 aa24.94■■□□□ 1.58
GGA1-215ENST00000453208 FSTL1Q12841 308 aa24.93■■□□□ 1.58
GGA1-215ENST00000453208 SLC39A6Q13433 755 aa24.93■■□□□ 1.58
GGA1-215ENST00000453208 SOS1Q07889 1333 aaPredicted RBP24.92■■□□□ 1.58
GGA1-215ENST00000453208 CAPN15O75808 1086 aa24.92■■□□□ 1.58
GGA1-215ENST00000453208 NFIXQ14938 502 aa24.92■■□□□ 1.58
GGA1-215ENST00000453208 C1orf141Q5JVX7 400 aa24.92■■□□□ 1.58
GGA1-215ENST00000453208 C16orf71Q8IYS4 520 aaPredicted RBP24.92■■□□□ 1.58
GGA1-215ENST00000453208 CARMIL3Q8ND23 1372 aa24.92■■□□□ 1.58
GGA1-215ENST00000453208 NUDCQ9Y266 331 aa24.9■■□□□ 1.58
GGA1-215ENST00000453208 KDM2BQ8NHM5 1336 aa24.89■■□□□ 1.58
GGA1-215ENST00000453208 CYP19A1P11511 503 aaPredicted RBP24.89■■□□□ 1.58
GGA1-215ENST00000453208 RALBP1Q15311 655 aa24.89■■□□□ 1.58
GGA1-215ENST00000453208 ZBTB1Q9Y2K1 713 aa24.89■■□□□ 1.58
GGA1-215ENST00000453208 SBF1O95248 1867 aa24.88■■□□□ 1.57
GGA1-215ENST00000453208 AKAP4Q5JQC9 854 aa24.88■■□□□ 1.57
GGA1-215ENST00000453208 POTECB2RU33 542 aa24.86■■□□□ 1.57
GGA1-215ENST00000453208 NFKBIEO00221 500 aa24.86■■□□□ 1.57
GGA1-215ENST00000453208 SLC52A2Q9HAB3 445 aa24.86■■□□□ 1.57
GGA1-215ENST00000453208 MTHFSDQ2M296 383 aaKnown RBP24.85■■□□□ 1.57
GGA1-215ENST00000453208 RSPH6AQ9H0K4 717 aa24.84■■□□□ 1.57
GGA1-215ENST00000453208 COL15A1P39059 1388 aa24.83■■□□□ 1.57
GGA1-215ENST00000453208 ZPR1O75312 459 aa24.83■■□□□ 1.57
GGA1-215ENST00000453208 U2AF1L5P0DN76 240 aaPredicted RBP24.83■■□□□ 1.57
GGA1-215ENST00000453208 U2AF1Q01081 240 aaKnown RBP eCLIP24.83■■□□□ 1.57
GGA1-215ENST00000453208 SMC1BQ8NDV3 1235 aa24.83■■□□□ 1.57
GGA1-215ENST00000453208 NARFQ9UHQ1 456 aa24.83■■□□□ 1.57
GGA1-215ENST00000453208 AFDNP55196 1824 aaKnown RBP24.83■■□□□ 1.57
GGA1-215ENST00000453208 MRC1P22897 1456 aa24.83■■□□□ 1.56
GGA1-215ENST00000453208 SCN11AQ9UI33 1791 aa24.82■■□□□ 1.56
GGA1-215ENST00000453208 TNRC6CQ9HCJ0 1690 aaKnown RBP24.82■■□□□ 1.56
GGA1-215ENST00000453208 RNMTO43148 476 aaKnown RBP24.82■■□□□ 1.56
GGA1-215ENST00000453208 SERPINB2P05120 415 aa24.82■■□□□ 1.56
GGA1-215ENST00000453208 CCDC24Q8N4L8 307 aa24.82■■□□□ 1.56
GGA1-215ENST00000453208 NRXN2Q9P2S2 1712 aa24.82■■□□□ 1.56
GGA1-215ENST00000453208 GLTPD2A6NH11 291 aa24.81■■□□□ 1.56
GGA1-215ENST00000453208 PRKAR2BP31323 418 aa24.81■■□□□ 1.56
GGA1-215ENST00000453208 GAS2L2Q8NHY3 880 aa24.81■■□□□ 1.56
GGA1-215ENST00000453208 LMNB1P20700 586 aa24.8■■□□□ 1.56
GGA1-215ENST00000453208 MYBBP1AQ9BQG0 1328 aaKnown RBP24.8■■□□□ 1.56
GGA1-215ENST00000453208 BICDL1Q6ZP65 573 aa24.79■■□□□ 1.56
GGA1-215ENST00000453208 C2CD5Q86YS7 1000 aa24.79■■□□□ 1.56
GGA1-215ENST00000453208 TNS4Q8IZW8 715 aa24.79■■□□□ 1.56
GGA1-215ENST00000453208 ZNF316A6NFI3 1004 aaPredicted RBP24.78■■□□□ 1.56
GGA1-215ENST00000453208 HSPA1AP0DMV8 641 aaKnown RBP24.78■■□□□ 1.56
GGA1-215ENST00000453208 HSPA1BP0DMV9 641 aaKnown RBP24.78■■□□□ 1.56
GGA1-215ENST00000453208 CANXP27824 592 aaKnown RBP24.77■■□□□ 1.56
GGA1-215ENST00000453208 TTLL6Q8N841 843 aa24.77■■□□□ 1.56
GGA1-215ENST00000453208 PHACTR3Q96KR7 559 aa24.77■■□□□ 1.56
GGA1-215ENST00000453208 POTEIP0CG38 1075 aa24.76■■□□□ 1.55
GGA1-215ENST00000453208 POTEJP0CG39 1038 aa24.76■■□□□ 1.55
GGA1-215ENST00000453208 VEGFAP15692 232 aaPredicted RBP24.76■■□□□ 1.55
GGA1-215ENST00000453208 ZNF219Q9P2Y4 722 aaPredicted RBP24.76■■□□□ 1.55
GGA1-215ENST00000453208 TBC1D9BQ66K14 1250 aa24.75■■□□□ 1.55
GGA1-215ENST00000453208 PRKRIP1Q9H875 184 aaPredicted RBP24.74■■□□□ 1.55
GGA1-215ENST00000453208 ZC3H4Q9UPT8 1303 aaKnown RBP24.74■■□□□ 1.55
GGA1-215ENST00000453208 DLEC1Q9Y238 1755 aa24.74■■□□□ 1.55
GGA1-215ENST00000453208 TIAM2Q8IVF5 1701 aa24.73■■□□□ 1.55
GGA1-215ENST00000453208 GNAT3A8MTJ3 354 aa24.73■■□□□ 1.55
GGA1-215ENST00000453208 EIF5P55010 431 aaKnown RBP24.72■■□□□ 1.55
GGA1-215ENST00000453208 C21orf2O43822 256 aa24.71■■□□□ 1.55
GGA1-215ENST00000453208 ANKRD31Q8N7Z5 1873 aa24.7■■□□□ 1.55
GGA1-215ENST00000453208 VIRMAQ69YN4 1812 aaKnown RBP24.7■■□□□ 1.55
GGA1-215ENST00000453208 COL11A2P13942 1736 aaPredicted RBP24.69■■□□□ 1.54
GGA1-215ENST00000453208 H0YIN7 160 aa24.69■■□□□ 1.54
GGA1-215ENST00000453208 PRR5LQ6MZQ0 368 aa24.69■■□□□ 1.54
GGA1-215ENST00000453208 ZNF496Q96IT1 587 aaPredicted RBP24.69■■□□□ 1.54
GGA1-215ENST00000453208 CEMIPQ8WUJ3 1361 aa24.68■■□□□ 1.54
GGA1-215ENST00000453208 IL17REQ8NFR9 667 aa24.68■■□□□ 1.54
GGA1-215ENST00000453208 ZNF622Q969S3 477 aaKnown RBP eCLIP24.68■■□□□ 1.542e-18■□□□□ 9.6
GGA1-215ENST00000453208 TBC1D2BQ9UPU7 963 aa24.68■■□□□ 1.54
GGA1-215ENST00000453208 VSIG10Q8N0Z9 540 aa24.67■■□□□ 1.54
GGA1-215ENST00000453208 UBR2Q8IWV8 1755 aa24.67■■□□□ 1.54
GGA1-215ENST00000453208 PLEKHF1Q96S99 279 aa24.66■■□□□ 1.54
GGA1-215ENST00000453208 KCNQ3O43525 872 aa24.65■■□□□ 1.54
GGA1-215ENST00000453208 DDNO94850 711 aaPredicted RBP24.65■■□□□ 1.54
GGA1-215ENST00000453208 NEFMP07197 916 aa24.65■■□□□ 1.54
GGA1-215ENST00000453208 TEFQ10587 303 aa24.65■■□□□ 1.54
GGA1-215ENST00000453208 CCDC88AQ3V6T2 1871 aa24.65■■□□□ 1.54
GGA1-215ENST00000453208 PNNQ9H307 717 aaKnown RBP24.65■■□□□ 1.54
GGA1-215ENST00000453208 MKRN1Q9UHC7 482 aaKnown RBP24.65■■□□□ 1.54
GGA1-215ENST00000453208 ERFEQ4G0M1 354 aa24.64■■□□□ 1.54
GGA1-215ENST00000453208 HTATSF1O43719 755 aaKnown RBP24.63■■□□□ 1.53
GGA1-215ENST00000453208 A1BGP04217 495 aa24.63■■□□□ 1.53
GGA1-215ENST00000453208 PIP4K2AP48426 406 aaPredicted RBP24.63■■□□□ 1.53
GGA1-215ENST00000453208 ZNF330Q9Y3S2 320 aaPredicted RBP24.63■■□□□ 1.53
GGA1-215ENST00000453208 SIPA1L3O60292 1781 aaPredicted RBP24.62■■□□□ 1.53
GGA1-215ENST00000453208 RTF1Q92541 710 aaKnown RBP24.62■■□□□ 1.53
GGA1-215ENST00000453208 BRIP1Q9BX63 1249 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms