RNA–Protein interactions for RNA: ENST00000453135.1

LINC01647-201, Transcript of long intergenic non-protein coding RNA 1647, humanhuman

TSL 1 (best) BASIC

Gene LINC01647, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01647-201ENST00000453135 HMGB2P26583 209 aaKnown RBP11.38□□□□□ -0.59
LINC01647-201ENST00000453135 SIK1P57059 783 aa11.38□□□□□ -0.59
LINC01647-201ENST00000453135 CALD1Q05682 793 aaKnown RBP11.38□□□□□ -0.59
LINC01647-201ENST00000453135 ZNF790Q6PG37 636 aa11.38□□□□□ -0.59
LINC01647-201ENST00000453135 DLG5Q8TDM6 1919 aa11.38□□□□□ -0.59
LINC01647-201ENST00000453135 HAX1O00165 279 aa11.37□□□□□ -0.59
LINC01647-201ENST00000453135 CHRM1P11229 460 aaPredicted RBP11.37□□□□□ -0.59
LINC01647-201ENST00000453135 ATP6V1AP38606 617 aa11.37□□□□□ -0.59
LINC01647-201ENST00000453135 KCNQ4P56696 695 aa11.37□□□□□ -0.59
LINC01647-201ENST00000453135 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
LINC01647-201ENST00000453135 PHF12Q96QT6 1004 aa11.37□□□□□ -0.59
LINC01647-201ENST00000453135 LRRC4BQ9NT99 713 aa11.37□□□□□ -0.59
LINC01647-201ENST00000453135 BABAM1Q9NWV8 329 aa11.37□□□□□ -0.59
LINC01647-201ENST00000453135 MIS18AQ9NYP9 233 aa11.37□□□□□ -0.59
LINC01647-201ENST00000453135 KCNQ3O43525 872 aa11.36□□□□□ -0.59
LINC01647-201ENST00000453135 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
LINC01647-201ENST00000453135 FMNL2Q96PY5 1086 aa11.36□□□□□ -0.59
LINC01647-201ENST00000453135 TSPYL4Q9UJ04 414 aa11.36□□□□□ -0.59
LINC01647-201ENST00000453135 LAS1LQ9Y4W2 734 aaKnown RBP11.36□□□□□ -0.59
LINC01647-201ENST00000453135 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
LINC01647-201ENST00000453135 CHL1O00533 1208 aa11.35□□□□□ -0.59
LINC01647-201ENST00000453135 VSIG10Q8N0Z9 540 aa11.35□□□□□ -0.59
LINC01647-201ENST00000453135 ZNF496Q96IT1 587 aaPredicted RBP11.35□□□□□ -0.59
LINC01647-201ENST00000453135 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
LINC01647-201ENST00000453135 SLC4A9Q96Q91 983 aa11.35□□□□□ -0.59
LINC01647-201ENST00000453135 RGPD3A6NKT7 1758 aaPredicted RBP11.35□□□□□ -0.59
LINC01647-201ENST00000453135 RGPD4Q7Z3J3 1758 aa11.35□□□□□ -0.59
LINC01647-201ENST00000453135 GNAI1P63096 354 aa11.34□□□□□ -0.59
LINC01647-201ENST00000453135 ITPK1Q13572 414 aa11.34□□□□□ -0.59
LINC01647-201ENST00000453135 WDR63Q8IWG1 891 aa11.34□□□□□ -0.59
LINC01647-201ENST00000453135 IFT57Q9NWB7 429 aa11.34□□□□□ -0.59
LINC01647-201ENST00000453135 STK32BQ9NY57 414 aa11.34□□□□□ -0.59
LINC01647-201ENST00000453135 ZNF853P0CG23 659 aa11.33□□□□□ -0.6
LINC01647-201ENST00000453135 EIF4A1P60842 406 aaKnown RBP11.33□□□□□ -0.6
LINC01647-201ENST00000453135 ZNF579Q8NAF0 562 aaKnown RBP11.33□□□□□ -0.6
LINC01647-201ENST00000453135 LINC00116Q8NCU8 138 aa11.33□□□□□ -0.6
LINC01647-201ENST00000453135 TEX13AQ9BXU3 409 aaPredicted RBP11.33□□□□□ -0.6
LINC01647-201ENST00000453135 SIPA1L3O60292 1781 aaPredicted RBP11.33□□□□□ -0.6
LINC01647-201ENST00000453135 IL16Q14005 1332 aa11.33□□□□□ -0.6
LINC01647-201ENST00000453135 LY75O60449 1722 aa11.32□□□□□ -0.6
LINC01647-201ENST00000453135 HEG1Q9ULI3 1381 aa11.32□□□□□ -0.6
LINC01647-201ENST00000453135 KCPQ6ZWJ8 1503 aa11.32□□□□□ -0.6
LINC01647-201ENST00000453135 SNRPA1P09661 255 aaKnown RBP11.32□□□□□ -0.6
LINC01647-201ENST00000453135 SLC15A2Q16348 729 aa11.32□□□□□ -0.6
LINC01647-201ENST00000453135 DNAJC10Q8IXB1 793 aa11.32□□□□□ -0.6
LINC01647-201ENST00000453135 KIF12Q96FN5 646 aa11.32□□□□□ -0.6
LINC01647-201ENST00000453135 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
LINC01647-201ENST00000453135 MBIPQ9NS73 344 aa11.32□□□□□ -0.6
LINC01647-201ENST00000453135 PAPPAQ13219 1627 aa11.31□□□□□ -0.6
LINC01647-201ENST00000453135 RREB1Q92766 1687 aa11.31□□□□□ -0.6
LINC01647-201ENST00000453135 STARD3NLO95772 234 aa11.31□□□□□ -0.6
LINC01647-201ENST00000453135 ZNF827Q17R98 1081 aa11.31□□□□□ -0.6
LINC01647-201ENST00000453135 AK7Q96M32 723 aa11.31□□□□□ -0.6
LINC01647-201ENST00000453135 ZNF521Q96K83 1311 aa11.31□□□□□ -0.6
LINC01647-201ENST00000453135 MAP3K13O43283 966 aa11.3□□□□□ -0.6
LINC01647-201ENST00000453135 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
LINC01647-201ENST00000453135 CYP19A1P11511 503 aaPredicted RBP11.3□□□□□ -0.6
LINC01647-201ENST00000453135 HNRNPUQ00839 825 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC01647-201ENST00000453135 RC3H1Q5TC82 1133 aaKnown RBP11.3□□□□□ -0.6
LINC01647-201ENST00000453135 TFCP2L1Q9NZI6 479 aa11.3□□□□□ -0.6
LINC01647-201ENST00000453135 NUP188Q5SRE5 1749 aa11.29□□□□□ -0.6
LINC01647-201ENST00000453135 PRAMEF22A3QJZ6 481 aa11.29□□□□□ -0.6
LINC01647-201ENST00000453135 CRKLP46109 303 aaKnown RBP11.29□□□□□ -0.6
LINC01647-201ENST00000453135 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
LINC01647-201ENST00000453135 R3HDM1Q15032 1099 aaKnown RBP11.29□□□□□ -0.6
LINC01647-201ENST00000453135 USP16Q9Y5T5 823 aa11.29□□□□□ -0.6
LINC01647-201ENST00000453135 CNTNAP4Q9C0A0 1308 aa11.29□□□□□ -0.6
LINC01647-201ENST00000453135 ZNF831Q5JPB2 1677 aa11.28□□□□□ -0.6
LINC01647-201ENST00000453135 PSDA5PKW4 1024 aaPredicted RBP11.28□□□□□ -0.6
LINC01647-201ENST00000453135 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
LINC01647-201ENST00000453135 GNPATO15228 680 aa11.28□□□□□ -0.6
LINC01647-201ENST00000453135 TSR2Q969E8 191 aaKnown RBP11.28□□□□□ -0.6
LINC01647-201ENST00000453135 MYH16Q9H6N6 1097 aa11.28□□□□□ -0.6
LINC01647-201ENST00000453135 CCDC87Q9NVE4 849 aa11.28□□□□□ -0.6
LINC01647-201ENST00000453135 RTCBQ9Y3I0 505 aaKnown RBP11.28□□□□□ -0.6
LINC01647-201ENST00000453135 KDM3BQ7LBC6 1761 aa11.28□□□□□ -0.6
LINC01647-201ENST00000453135 UBR2Q8IWV8 1755 aa11.28□□□□□ -0.6
LINC01647-201ENST00000453135 E9PSI1 815 aa11.27□□□□□ -0.61
LINC01647-201ENST00000453135 RPS6KA4O75676 772 aa11.27□□□□□ -0.61
LINC01647-201ENST00000453135 KRT24Q2M2I5 525 aa11.27□□□□□ -0.61
LINC01647-201ENST00000453135 INTS5Q6P9B9 1019 aaKnown RBP11.27□□□□□ -0.61
LINC01647-201ENST00000453135 FLAD1Q8NFF5 587 aa11.27□□□□□ -0.61
LINC01647-201ENST00000453135 PCDHB8Q9UN66 801 aa11.27□□□□□ -0.61
LINC01647-201ENST00000453135 PCDHB13Q9Y5F0 798 aa11.27□□□□□ -0.61
LINC01647-201ENST00000453135 A1BGP04217 495 aa11.26□□□□□ -0.61
LINC01647-201ENST00000453135 HOXB7P09629 217 aa11.26□□□□□ -0.61
LINC01647-201ENST00000453135 EIF2S2P20042 333 aaKnown RBP11.26□□□□□ -0.61
LINC01647-201ENST00000453135 CANXP27824 592 aaKnown RBP11.26□□□□□ -0.61
LINC01647-201ENST00000453135 SSFA2P28290 1259 aa11.26□□□□□ -0.61
LINC01647-201ENST00000453135 TRAPPC3LQ5T215 181 aa11.26□□□□□ -0.61
LINC01647-201ENST00000453135 DUSP27Q5VZP5 1158 aa11.26□□□□□ -0.61
LINC01647-201ENST00000453135 ZBTB1Q9Y2K1 713 aa11.26□□□□□ -0.61
LINC01647-201ENST00000453135 FANCIQ9NVI1 1328 aa11.26□□□□□ -0.61
LINC01647-201ENST00000453135 C5P01031 1676 aa11.26□□□□□ -0.61
LINC01647-201ENST00000453135 C4BP0C0L5 1744 aa11.26□□□□□ -0.61
LINC01647-201ENST00000453135 TAF1LQ8IZX4 1826 aa11.25□□□□□ -0.61
LINC01647-201ENST00000453135 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
LINC01647-201ENST00000453135 ELL2O00472 640 aaPredicted RBP11.25□□□□□ -0.61
LINC01647-201ENST00000453135 PHF14O94880 888 aa11.25□□□□□ -0.61
LINC01647-201ENST00000453135 SLFN5Q08AF3 891 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms