RNA–Protein interactions for RNA: ENST00000452668.1

CHKB-CPT1B-201, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 4

Gene CHKB-CPT1B, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-201ENST00000452668 COL15A1P39059 1388 aa15.95■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 POLRMTO00411 1230 aaKnown RBP15.94■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 TOMM70O94826 608 aa15.94■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 TM4SF1P30408 202 aa15.94■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 MYH14Q7Z406 1995 aaKnown RBP15.93■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 NPC1L1Q9UHC9 1359 aa15.93■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 KIF3CO14782 793 aa15.93■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 NPHP1O15259 732 aa15.93■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 KCNA3P22001 575 aa15.93■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 CHRNA5P30532 468 aa15.93■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 RNF181Q9P0P0 153 aa15.93■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 ZBTB1Q9Y2K1 713 aa15.93■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 ZNF330Q9Y3S2 320 aaPredicted RBP15.93■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 TJP1Q07157 1748 aa15.93■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 MRC1P22897 1456 aa15.92■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 APLP1P51693 650 aa15.92■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 SERPINB2P05120 415 aa15.91■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 NFIXQ14938 502 aa15.91■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 H0YIN7 160 aa15.9■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 ZNF790Q6PG37 636 aa15.9■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 BICDL1Q6ZP65 573 aa15.9■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 RTF1Q92541 710 aaKnown RBP15.9■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 FMNL2Q96PY5 1086 aa15.9■□□□□ 0.14
CHKB-CPT1B-201ENST00000452668 TTLL6Q8N841 843 aa15.89■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 NMRK2Q9NPI5 230 aa15.89■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 KCPQ6ZWJ8 1503 aa15.89■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 KIAA1551Q9HCM1 1747 aa15.88■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 NEFMP07197 916 aa15.88■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 C2CD5Q86YS7 1000 aa15.88■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 ZNF496Q96IT1 587 aaPredicted RBP15.88■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 PDZRN3Q9UPQ7 1066 aa15.88■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 U2AF1L5P0DN76 240 aaPredicted RBP15.87■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 PRKAR2BP31323 418 aa15.87■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 U2AF1Q01081 240 aaKnown RBP eCLIP15.87■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 IL17REQ8NFR9 667 aa15.87■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 RBM46Q8TBY0 533 aaKnown RBP15.87■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 LMNB1P20700 586 aa15.86■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 PDE6BP35913 854 aa15.86■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 IL6STP40189 918 aaPredicted RBP15.86■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 EIF5P55010 431 aaKnown RBP15.86■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 ARFGEF1Q9Y6D6 1849 aa15.85■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 ZNF622Q969S3 477 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 SETDB2Q96T68 719 aa15.85■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 TBC1D2BQ9UPU7 963 aa15.85■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 ZC3H4Q9UPT8 1303 aaKnown RBP15.85■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 ST5P78524 1137 aa15.84■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 FSTL1Q12841 308 aa15.84■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 BCL2L12Q9HB09 334 aa15.84■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 RRAGCQ9HB90 399 aa15.84■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 CARMIL3Q8ND23 1372 aa15.84■□□□□ 0.13
CHKB-CPT1B-201ENST00000452668 BRCA1P38398 1863 aaKnown RBP15.83■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 TBC1D9BQ66K14 1250 aa15.83■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 BRIP1Q9BX63 1249 aa15.83■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 ZNF652Q9Y2D9 606 aa15.83■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 ADAMTS7Q9UKP4 1686 aa15.83■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 RASSF7Q02833 373 aa15.82■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 IFFO2Q5TF58 517 aa15.82■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 DPY19L2Q6NUT2 758 aa15.82■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 CNBD1Q8NA66 436 aa15.82■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 VIRMAQ69YN4 1812 aaKnown RBP15.82■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 A1BGP04217 495 aa15.81■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 SNRPA1P09661 255 aaKnown RBP15.81■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 CEP350Q5VT06 3117 aa15.81■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 DZIP3Q86Y13 1208 aaKnown RBP15.81■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 PHACTR3Q96KR7 559 aa15.81■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 CEMIPQ8WUJ3 1361 aa15.8■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 PPP2R1AP30153 589 aa15.8■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 SMC1BQ8NDV3 1235 aa15.8■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 UBR2Q8IWV8 1755 aa15.8■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 HTATSF1O43719 755 aaKnown RBP15.79■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 VEGFAP15692 232 aaPredicted RBP15.79■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 SOGA3Q5TF21 947 aa15.79■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 PRR5LQ6MZQ0 368 aa15.79■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 CNKSR1Q969H4 720 aa15.79■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 GLTPD2A6NH11 291 aa15.78■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 C21orf2O43822 256 aa15.78■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 MCM10Q7L590 875 aa15.78■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 NBPF5PQ86XG9 351 aaPredicted RBP15.78■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 AFDNP55196 1824 aaKnown RBP15.78■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 KCNQ3O43525 872 aa15.77■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 CAMTA2O94983 1202 aa15.77■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 CLEC4GQ6UXB4 293 aa15.77■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 CCDC24Q8N4L8 307 aa15.77■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 PNNQ9H307 717 aaKnown RBP15.77■□□□□ 0.12
CHKB-CPT1B-201ENST00000452668 NRXN2Q9P2S2 1712 aa15.77■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 GTF2E1P29083 439 aaPredicted RBP15.76■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 TAF7Q15545 349 aaPredicted RBP15.76■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 ERFEQ4G0M1 354 aa15.76■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 STYK1Q6J9G0 422 aa15.76■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 USP16Q9Y5T5 823 aa15.76■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 TPTE2Q6XPS3 522 aa15.75■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 PNISRQ8TF01 805 aaKnown RBP15.75■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 MASTLQ96GX5 879 aa15.75■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 TAOK3Q9H2K8 898 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms