RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 FBXO45P0C2W1 286 aa7.78□□□□□ -1.16
VPS8-212ENST00000452666 H2AFB1P0C5Y9 115 aa7.78□□□□□ -1.16
VPS8-212ENST00000452666 H2AFB2P0C5Z0 115 aa7.78□□□□□ -1.16
VPS8-212ENST00000452666 SH3D19Q5HYK7 790 aa7.78□□□□□ -1.16
VPS8-212ENST00000452666 MYCP01106 439 aaPredicted RBP7.77□□□□□ -1.17
VPS8-212ENST00000452666 CD33P20138 364 aa7.77□□□□□ -1.17
VPS8-212ENST00000452666 ESCO1Q5FWF5 840 aa7.77□□□□□ -1.17
VPS8-212ENST00000452666 ZNF468Q5VIY5 522 aaPredicted RBP7.77□□□□□ -1.17
VPS8-212ENST00000452666 DCDC2BA2VCK2 349 aa7.76□□□□□ -1.17
VPS8-212ENST00000452666 MAPTP10636 758 aaKnown RBP7.76□□□□□ -1.17
VPS8-212ENST00000452666 ALAS2P22557 587 aa7.76□□□□□ -1.17
VPS8-212ENST00000452666 PCBP4P57723 403 aaKnown RBP7.76□□□□□ -1.17
VPS8-212ENST00000452666 MCTP1Q6DN14 999 aa7.76□□□□□ -1.17
VPS8-212ENST00000452666 C1orf216Q8TAB5 229 aa7.76□□□□□ -1.17
VPS8-212ENST00000452666 PRR12Q9ULL5 1215 aa7.76□□□□□ -1.17
VPS8-212ENST00000452666 ELOA3CA0A087WX78 387 aaPredicted RBP7.75□□□□□ -1.17
VPS8-212ENST00000452666 ELOA3DA6NLF2 546 aaPredicted RBP7.75□□□□□ -1.17
VPS8-212ENST00000452666 TNP2Q05952 138 aa7.75□□□□□ -1.17
VPS8-212ENST00000452666 ELOA3BQ3SY89 546 aa7.75□□□□□ -1.17
VPS8-212ENST00000452666 PPARGC1BQ86YN6 1023 aaKnown RBP7.75□□□□□ -1.17
VPS8-212ENST00000452666 ELOA3Q8NG57 546 aa7.75□□□□□ -1.17
VPS8-212ENST00000452666 TRIM34Q9BYJ4 488 aa7.75□□□□□ -1.17
VPS8-212ENST00000452666 KRTAP4-7Q9BYR0 210 aa7.75□□□□□ -1.17
VPS8-212ENST00000452666 PLA2G4AP47712 749 aa7.74□□□□□ -1.17
VPS8-212ENST00000452666 TRIM28Q13263 835 aaKnown RBP7.74□□□□□ -1.17
VPS8-212ENST00000452666 FAM229AH3BQW9 127 aa7.73□□□□□ -1.17
VPS8-212ENST00000452666 KHNYNO15037 678 aaKnown RBP7.73□□□□□ -1.17
VPS8-212ENST00000452666 PAX4O43316 350 aa7.73□□□□□ -1.17
VPS8-212ENST00000452666 YBX3P16989 372 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS8-212ENST00000452666 TXKP42681 527 aa7.73□□□□□ -1.17
VPS8-212ENST00000452666 ZNF330Q9Y3S2 320 aaPredicted RBP7.73□□□□□ -1.17
VPS8-212ENST00000452666 ATP4AP20648 1035 aa7.72□□□□□ -1.17
VPS8-212ENST00000452666 HCN2Q9UL51 889 aa7.72□□□□□ -1.17
VPS8-212ENST00000452666 TLR1Q15399 786 aa7.71□□□□□ -1.18
VPS8-212ENST00000452666 LCE1DQ5T752 114 aa7.71□□□□□ -1.18
VPS8-212ENST00000452666 C9orf172C9J069 976 aa7.7□□□□□ -1.18
VPS8-212ENST00000452666 GRIK4Q16099 956 aa7.7□□□□□ -1.18
VPS8-212ENST00000452666 A0A1W2PNR3 127 aa7.69□□□□□ -1.18
VPS8-212ENST00000452666 M0R082 166 aa7.69□□□□□ -1.18
VPS8-212ENST00000452666 FAM157BP0CG42 384 aa7.69□□□□□ -1.18
VPS8-212ENST00000452666 ELNP15502 786 aa7.69□□□□□ -1.18
VPS8-212ENST00000452666 NR1H3Q13133 447 aa7.69□□□□□ -1.18
VPS8-212ENST00000452666 ARSJQ5FYB0 599 aaPredicted RBP7.69□□□□□ -1.18
VPS8-212ENST00000452666 ZNF417Q8TAU3 575 aa7.69□□□□□ -1.18
VPS8-212ENST00000452666 AIDAQ96BJ3 306 aa7.69□□□□□ -1.18
VPS8-212ENST00000452666 ZNF587Q96SQ5 575 aaPredicted RBP7.69□□□□□ -1.18
VPS8-212ENST00000452666 PRDM6Q9NQX0 595 aa7.69□□□□□ -1.18
VPS8-212ENST00000452666 RFC5P40937 340 aa7.68□□□□□ -1.18
VPS8-212ENST00000452666 ADGRE1Q14246 886 aa7.68□□□□□ -1.18
VPS8-212ENST00000452666 MARK1Q9P0L2 795 aa7.68□□□□□ -1.18
VPS8-212ENST00000452666 COL9A3Q14050 684 aaPredicted RBP7.67□□□□□ -1.18
VPS8-212ENST00000452666 SYT9Q86SS6 491 aa7.67□□□□□ -1.18
VPS8-212ENST00000452666 MDFIQ99750 246 aa7.67□□□□□ -1.18
VPS8-212ENST00000452666 CDCA7Q9BWT1 371 aaPredicted RBP7.67□□□□□ -1.18
VPS8-212ENST00000452666 ETNK1Q9HBU6 452 aa7.67□□□□□ -1.18
VPS8-212ENST00000452666 COL17A1Q9UMD9 1497 aaPredicted RBP7.67□□□□□ -1.18
VPS8-212ENST00000452666 LAMC2Q13753 1193 aa7.66□□□□□ -1.18
VPS8-212ENST00000452666 MBTPS1Q14703 1052 aa7.66□□□□□ -1.18
VPS8-212ENST00000452666 NBPF1Q3BBV0 1214 aa7.66□□□□□ -1.18
VPS8-212ENST00000452666 TXNRD3Q86VQ6 643 aa7.66□□□□□ -1.18
VPS8-212ENST00000452666 NIFKQ9BYG3 293 aaKnown RBP7.66□□□□□ -1.18
VPS8-212ENST00000452666 SLC24A3Q9HC58 644 aa7.66□□□□□ -1.18
VPS8-212ENST00000452666 GJA3Q9Y6H8 435 aa7.66□□□□□ -1.18
VPS8-212ENST00000452666 ADARB2-AS1A8MUL3 147 aa7.65□□□□□ -1.18
VPS8-212ENST00000452666 DDRGK1Q96HY6 314 aa7.65□□□□□ -1.18
VPS8-212ENST00000452666 SIN3BO75182 1162 aa7.64□□□□□ -1.19
VPS8-212ENST00000452666 TATP17735 454 aaPredicted RBP7.64□□□□□ -1.19
VPS8-212ENST00000452666 NRG1Q02297 640 aaPredicted RBP7.64□□□□□ -1.19
VPS8-212ENST00000452666 SAMD5Q5TGI4 173 aa7.64□□□□□ -1.19
VPS8-212ENST00000452666 TP53INP1Q96A56 240 aa7.64□□□□□ -1.19
VPS8-212ENST00000452666 CCDC85AQ96PX6 553 aaPredicted RBP7.64□□□□□ -1.19
VPS8-212ENST00000452666 FMNL2Q96PY5 1086 aa7.64□□□□□ -1.19
VPS8-212ENST00000452666 RNF112Q9ULX5 631 aa7.64□□□□□ -1.19
VPS8-212ENST00000452666 NID1P14543 1247 aa7.63□□□□□ -1.19
VPS8-212ENST00000452666 MICALL1Q8N3F8 863 aa7.63□□□□□ -1.19
VPS8-212ENST00000452666 GJD4Q96KN9 370 aaPredicted RBP7.63□□□□□ -1.19
VPS8-212ENST00000452666 STRN4Q9NRL3 753 aa7.63□□□□□ -1.19
VPS8-212ENST00000452666 EFSO43281 561 aa7.62□□□□□ -1.19
VPS8-212ENST00000452666 STAU1O95793 577 aaKnown RBP7.62□□□□□ -1.19
VPS8-212ENST00000452666 ALBP02768 609 aa7.62□□□□□ -1.19
VPS8-212ENST00000452666 USP4Q13107 963 aa7.62□□□□□ -1.19
VPS8-212ENST00000452666 TMEM259Q4ZIN3 620 aa7.62□□□□□ -1.19
VPS8-212ENST00000452666 SELPP16109 830 aa7.61□□□□□ -1.19
VPS8-212ENST00000452666 TRAPPC3LQ5T215 181 aa7.61□□□□□ -1.19
VPS8-212ENST00000452666 C8orf86Q6ZUL3 223 aa7.61□□□□□ -1.19
VPS8-212ENST00000452666 TNFRSF25Q93038 417 aa7.61□□□□□ -1.19
VPS8-212ENST00000452666 LENG1Q96BZ8 264 aaPredicted RBP7.61□□□□□ -1.19
VPS8-212ENST00000452666 ZIC5Q96T25 663 aa7.61□□□□□ -1.19
VPS8-212ENST00000452666 ZDHHC3Q9NYG2 299 aa7.61□□□□□ -1.19
VPS8-212ENST00000452666 STARD13Q9Y3M8 1113 aa7.61□□□□□ -1.19
VPS8-212ENST00000452666 CEP126Q9P2H0 1117 aa7.6□□□□□ -1.19
VPS8-212ENST00000452666 INHAP05111 366 aa7.58□□□□□ -1.2
VPS8-212ENST00000452666 RAC1P63000 192 aa7.58□□□□□ -1.2
VPS8-212ENST00000452666 BICDL1Q6ZP65 573 aa7.58□□□□□ -1.2
VPS8-212ENST00000452666 PCMTD2Q9NV79 361 aa7.58□□□□□ -1.2
VPS8-212ENST00000452666 DOLKQ9UPQ8 538 aa7.58□□□□□ -1.2
VPS8-212ENST00000452666 A0A0A0MRY4 1105 aa7.57□□□□□ -1.2
VPS8-212ENST00000452666 SMTNP53814 917 aa7.57□□□□□ -1.2
VPS8-212ENST00000452666 GDF10P55107 478 aa7.57□□□□□ -1.2
VPS8-212ENST00000452666 SIRT1Q96EB6 747 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms