RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 DDR1Q08345 913 aa16.65■□□□□ 0.26
CPSF4-208ENST00000452047 WWC3Q9ULE0 1092 aa16.65■□□□□ 0.26
CPSF4-208ENST00000452047 AFDNP55196 1824 aaKnown RBP16.65■□□□□ 0.26
CPSF4-208ENST00000452047 SCN7AQ01118 1682 aa16.65■□□□□ 0.26
CPSF4-208ENST00000452047 TGFB2P61812 414 aa16.64■□□□□ 0.25
CPSF4-208ENST00000452047 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
CPSF4-208ENST00000452047 ZPR1O75312 459 aa16.63■□□□□ 0.25
CPSF4-208ENST00000452047 STARD3NLO95772 234 aa16.63■□□□□ 0.25
CPSF4-208ENST00000452047 TM4SF1P30408 202 aa16.63■□□□□ 0.25
CPSF4-208ENST00000452047 MCM10Q7L590 875 aa16.63■□□□□ 0.25
CPSF4-208ENST00000452047 FMNL2Q96PY5 1086 aa16.63■□□□□ 0.25
CPSF4-208ENST00000452047 NARFQ9UHQ1 456 aa16.63■□□□□ 0.25
CPSF4-208ENST00000452047 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
CPSF4-208ENST00000452047 POLRMTO00411 1230 aaKnown RBP16.62■□□□□ 0.25
CPSF4-208ENST00000452047 KCNQ3O43525 872 aa16.62■□□□□ 0.25
CPSF4-208ENST00000452047 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
CPSF4-208ENST00000452047 BCL2L12Q9HB09 334 aa16.62■□□□□ 0.25
CPSF4-208ENST00000452047 ADCY9O60503 1353 aa16.62■□□□□ 0.25
CPSF4-208ENST00000452047 ARFGEF1Q9Y6D6 1849 aa16.61■□□□□ 0.25
CPSF4-208ENST00000452047 A0A0G2JLW4 131 aa16.61■□□□□ 0.25
CPSF4-208ENST00000452047 HTATSF1O43719 755 aaKnown RBP16.61■□□□□ 0.25
CPSF4-208ENST00000452047 CANXP27824 592 aaKnown RBP16.61■□□□□ 0.25
CPSF4-208ENST00000452047 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
CPSF4-208ENST00000452047 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
CPSF4-208ENST00000452047 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
CPSF4-208ENST00000452047 BCORQ6W2J9 1755 aa16.6■□□□□ 0.25
CPSF4-208ENST00000452047 KDM3BQ7LBC6 1761 aa16.6■□□□□ 0.25
CPSF4-208ENST00000452047 DPEP1P16444 411 aa16.6■□□□□ 0.25
CPSF4-208ENST00000452047 KCNA3P22001 575 aa16.6■□□□□ 0.25
CPSF4-208ENST00000452047 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
CPSF4-208ENST00000452047 NFIXQ14938 502 aa16.59■□□□□ 0.25
CPSF4-208ENST00000452047 RALBP1Q15311 655 aa16.59■□□□□ 0.25
CPSF4-208ENST00000452047 LAMB4A4D0S4 1761 aa16.59■□□□□ 0.25
CPSF4-208ENST00000452047 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
CPSF4-208ENST00000452047 DDX10Q13206 875 aaKnown RBP16.58■□□□□ 0.24
CPSF4-208ENST00000452047 ATP10DQ9P241 1426 aa16.58■□□□□ 0.24
CPSF4-208ENST00000452047 A1BGP04217 495 aa16.57■□□□□ 0.24
CPSF4-208ENST00000452047 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
CPSF4-208ENST00000452047 BCS1LQ9Y276 419 aa16.57■□□□□ 0.24
CPSF4-208ENST00000452047 A0A087WZG4 1122 aa16.56■□□□□ 0.24
CPSF4-208ENST00000452047 PRAMEF22A3QJZ6 481 aa16.56■□□□□ 0.24
CPSF4-208ENST00000452047 USP16Q9Y5T5 823 aa16.56■□□□□ 0.24
CPSF4-208ENST00000452047 ANKRD31Q8N7Z5 1873 aa16.55■□□□□ 0.24
CPSF4-208ENST00000452047 NEFMP07197 916 aa16.55■□□□□ 0.24
CPSF4-208ENST00000452047 TAF7Q15545 349 aaPredicted RBP16.55■□□□□ 0.24
CPSF4-208ENST00000452047 NFE2L2Q16236 605 aa16.55■□□□□ 0.24
CPSF4-208ENST00000452047 SNRPA1P09661 255 aaKnown RBP16.54■□□□□ 0.24
CPSF4-208ENST00000452047 TBC1D2BQ9UPU7 963 aa16.54■□□□□ 0.24
CPSF4-208ENST00000452047 ZNF330Q9Y3S2 320 aaPredicted RBP16.54■□□□□ 0.24
CPSF4-208ENST00000452047 CARMIL3Q8ND23 1372 aa16.53■□□□□ 0.24
CPSF4-208ENST00000452047 MYBBP1AQ9BQG0 1328 aaKnown RBP16.53■□□□□ 0.24
CPSF4-208ENST00000452047 SERPINB2P05120 415 aa16.53■□□□□ 0.24
CPSF4-208ENST00000452047 CHRNA5P30532 468 aa16.53■□□□□ 0.24
CPSF4-208ENST00000452047 TBC1D9BQ66K14 1250 aa16.53■□□□□ 0.24
CPSF4-208ENST00000452047 PNNQ9H307 717 aaKnown RBP16.53■□□□□ 0.24
CPSF4-208ENST00000452047 PIM2Q9P1W9 311 aa16.53■□□□□ 0.24
CPSF4-208ENST00000452047 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.24
CPSF4-208ENST00000452047 CAMTA2O94983 1202 aa16.52■□□□□ 0.24
CPSF4-208ENST00000452047 PIP4K2AP48426 406 aaPredicted RBP16.52■□□□□ 0.24
CPSF4-208ENST00000452047 MIS18AQ9NYP9 233 aa16.52■□□□□ 0.24
CPSF4-208ENST00000452047 CEP350Q5VT06 3117 aa16.52■□□□□ 0.23
CPSF4-208ENST00000452047 COL11A2P13942 1736 aaPredicted RBP16.51■□□□□ 0.23
CPSF4-208ENST00000452047 GIGYF1O75420 1035 aaPredicted RBP16.51■□□□□ 0.23
CPSF4-208ENST00000452047 C1QTNF8P60827 252 aa16.51■□□□□ 0.23
CPSF4-208ENST00000452047 DALRD3Q5D0E6 543 aaKnown RBP16.51■□□□□ 0.23
CPSF4-208ENST00000452047 BICDL1Q6ZP65 573 aa16.51■□□□□ 0.23
CPSF4-208ENST00000452047 THUMPD2Q9BTF0 503 aaKnown RBP16.51■□□□□ 0.23
CPSF4-208ENST00000452047 NBPF26B4DH59 902 aa16.5■□□□□ 0.23
CPSF4-208ENST00000452047 NBPF10Q6P3W6 841 aaKnown RBP16.5■□□□□ 0.23
CPSF4-208ENST00000452047 DZIP3Q86Y13 1208 aaKnown RBP16.5■□□□□ 0.23
CPSF4-208ENST00000452047 NBPF15Q8N660 670 aa16.5■□□□□ 0.23
CPSF4-208ENST00000452047 SBF1O95248 1867 aa16.49■□□□□ 0.23
CPSF4-208ENST00000452047 ARHGAP27Q6ZUM4 889 aa16.49■□□□□ 0.23
CPSF4-208ENST00000452047 PNISRQ8TF01 805 aaKnown RBP16.49■□□□□ 0.23
CPSF4-208ENST00000452047 NPM2Q86SE8 214 aaKnown RBP16.48■□□□□ 0.23
CPSF4-208ENST00000452047 GPBP1L1Q9HC44 474 aaPredicted RBP16.48■□□□□ 0.23
CPSF4-208ENST00000452047 EIF4A1P60842 406 aaKnown RBP16.47■□□□□ 0.23
CPSF4-208ENST00000452047 PRR5LQ6MZQ0 368 aa16.47■□□□□ 0.23
CPSF4-208ENST00000452047 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
CPSF4-208ENST00000452047 CLEC4GQ6UXB4 293 aa16.46■□□□□ 0.23
CPSF4-208ENST00000452047 ZNF526Q8TF50 670 aaPredicted RBP16.46■□□□□ 0.23
CPSF4-208ENST00000452047 SETDB2Q96T68 719 aa16.46■□□□□ 0.23
CPSF4-208ENST00000452047 PRKRIP1Q9H875 184 aaPredicted RBP16.46■□□□□ 0.23
CPSF4-208ENST00000452047 RGL2O15211 777 aa16.45■□□□□ 0.22
CPSF4-208ENST00000452047 RIPK4P57078 832 aa16.45■□□□□ 0.22
CPSF4-208ENST00000452047 C2CD5Q86YS7 1000 aa16.45■□□□□ 0.22
CPSF4-208ENST00000452047 BRIP1Q9BX63 1249 aa16.45■□□□□ 0.22
CPSF4-208ENST00000452047 ARFGEF2Q9Y6D5 1785 aa16.45■□□□□ 0.22
CPSF4-208ENST00000452047 H0YIN7 160 aa16.44■□□□□ 0.22
CPSF4-208ENST00000452047 CCDC24Q8N4L8 307 aa16.44■□□□□ 0.22
CPSF4-208ENST00000452047 CNBD1Q8NA66 436 aa16.44■□□□□ 0.22
CPSF4-208ENST00000452047 NUP98P52948 1817 aa16.44■□□□□ 0.22
CPSF4-208ENST00000452047 CACNA1SQ13698 1873 aa16.44■□□□□ 0.22
CPSF4-208ENST00000452047 C9orf131Q5VYM1 1079 aa16.43■□□□□ 0.22
CPSF4-208ENST00000452047 CCDC146Q8IYE0 955 aa16.43■□□□□ 0.22
CPSF4-208ENST00000452047 TTLL6Q8N841 843 aa16.43■□□□□ 0.22
CPSF4-208ENST00000452047 PDZRN3Q9UPQ7 1066 aa16.43■□□□□ 0.22
CPSF4-208ENST00000452047 ZNF652Q9Y2D9 606 aa16.43■□□□□ 0.22
CPSF4-208ENST00000452047 PDE6BP35913 854 aa16.42■□□□□ 0.22
CPSF4-208ENST00000452047 LMOD3Q0VAK6 560 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms