RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 ZBTB1Q9Y2K1 713 aa13.35□□□□□ -0.27
LINC01238-204ENST00000451070 COL15A1P39059 1388 aa13.34□□□□□ -0.27
LINC01238-204ENST00000451070 NRXN2Q9P2S2 1712 aa13.34□□□□□ -0.27
LINC01238-204ENST00000451070 U2SURPO15042 1029 aaKnown RBP13.34□□□□□ -0.27
LINC01238-204ENST00000451070 FCHSD2O94868 740 aa13.34□□□□□ -0.27
LINC01238-204ENST00000451070 USPL1Q5W0Q7 1092 aa13.34□□□□□ -0.27
LINC01238-204ENST00000451070 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
LINC01238-204ENST00000451070 IL17REQ8NFR9 667 aa13.34□□□□□ -0.27
LINC01238-204ENST00000451070 KIF3CO14782 793 aa13.33□□□□□ -0.28
LINC01238-204ENST00000451070 ZPR1O75312 459 aa13.33□□□□□ -0.28
LINC01238-204ENST00000451070 ARHGAP27Q6ZUM4 889 aa13.33□□□□□ -0.28
LINC01238-204ENST00000451070 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
LINC01238-204ENST00000451070 NARFQ9UHQ1 456 aa13.33□□□□□ -0.28
LINC01238-204ENST00000451070 GNAT3A8MTJ3 354 aa13.32□□□□□ -0.28
LINC01238-204ENST00000451070 CHRNA5P30532 468 aa13.32□□□□□ -0.28
LINC01238-204ENST00000451070 PIM2Q9P1W9 311 aa13.32□□□□□ -0.28
LINC01238-204ENST00000451070 NFIXQ14938 502 aa13.31□□□□□ -0.28
LINC01238-204ENST00000451070 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
LINC01238-204ENST00000451070 ZNF496Q96IT1 587 aaPredicted RBP13.31□□□□□ -0.28
LINC01238-204ENST00000451070 PHACTR3Q96KR7 559 aa13.31□□□□□ -0.28
LINC01238-204ENST00000451070 SBF1O95248 1867 aa13.31□□□□□ -0.28
LINC01238-204ENST00000451070 CEMIPQ8WUJ3 1361 aa13.31□□□□□ -0.28
LINC01238-204ENST00000451070 HEG1Q9ULI3 1381 aa13.31□□□□□ -0.28
LINC01238-204ENST00000451070 DLEC1Q9Y238 1755 aa13.3□□□□□ -0.28
LINC01238-204ENST00000451070 CANXP27824 592 aaKnown RBP13.3□□□□□ -0.28
LINC01238-204ENST00000451070 EIF5P55010 431 aaKnown RBP13.3□□□□□ -0.28
LINC01238-204ENST00000451070 ZNF790Q6PG37 636 aa13.3□□□□□ -0.28
LINC01238-204ENST00000451070 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
LINC01238-204ENST00000451070 RSPH6AQ9H0K4 717 aa13.3□□□□□ -0.28
LINC01238-204ENST00000451070 SCN7AQ01118 1682 aa13.29□□□□□ -0.28
LINC01238-204ENST00000451070 PRKAR2BP31323 418 aa13.29□□□□□ -0.28
LINC01238-204ENST00000451070 TEFQ10587 303 aa13.29□□□□□ -0.28
LINC01238-204ENST00000451070 DALRD3Q5D0E6 543 aaKnown RBP13.29□□□□□ -0.28
LINC01238-204ENST00000451070 STARD3NLO95772 234 aa13.28□□□□□ -0.28
LINC01238-204ENST00000451070 HSPA6P17066 643 aa13.28□□□□□ -0.28
LINC01238-204ENST00000451070 PPP2R1AP30153 589 aa13.28□□□□□ -0.28
LINC01238-204ENST00000451070 C9orf131Q5VYM1 1079 aa13.28□□□□□ -0.28
LINC01238-204ENST00000451070 CFAP53Q96M91 514 aa13.28□□□□□ -0.28
LINC01238-204ENST00000451070 ANKRD31Q8N7Z5 1873 aa13.27□□□□□ -0.28
LINC01238-204ENST00000451070 KCNQ3O43525 872 aa13.27□□□□□ -0.29
LINC01238-204ENST00000451070 SERPINB2P05120 415 aa13.27□□□□□ -0.29
LINC01238-204ENST00000451070 CARMIL3Q8ND23 1372 aa13.27□□□□□ -0.29
LINC01238-204ENST00000451070 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
LINC01238-204ENST00000451070 NMRK2Q9NPI5 230 aa13.26□□□□□ -0.29
LINC01238-204ENST00000451070 A0A087WZG4 1122 aa13.25□□□□□ -0.29
LINC01238-204ENST00000451070 A1BGP04217 495 aa13.25□□□□□ -0.29
LINC01238-204ENST00000451070 TBC1D9BQ66K14 1250 aa13.25□□□□□ -0.29
LINC01238-204ENST00000451070 BICDL1Q6ZP65 573 aa13.25□□□□□ -0.29
LINC01238-204ENST00000451070 FMNL2Q96PY5 1086 aa13.25□□□□□ -0.29
LINC01238-204ENST00000451070 NUDCQ9Y266 331 aa13.25□□□□□ -0.29
LINC01238-204ENST00000451070 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
LINC01238-204ENST00000451070 BTBD11A6QL63 1104 aa13.24□□□□□ -0.29
LINC01238-204ENST00000451070 U2AF1L5P0DN76 240 aaPredicted RBP13.24□□□□□ -0.29
LINC01238-204ENST00000451070 IL6STP40189 918 aaPredicted RBP13.24□□□□□ -0.29
LINC01238-204ENST00000451070 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC01238-204ENST00000451070 RNF181Q9P0P0 153 aa13.24□□□□□ -0.29
LINC01238-204ENST00000451070 TBC1D2BQ9UPU7 963 aa13.24□□□□□ -0.29
LINC01238-204ENST00000451070 CCDC88AQ3V6T2 1871 aa13.24□□□□□ -0.29
LINC01238-204ENST00000451070 COL11A2P13942 1736 aaPredicted RBP13.23□□□□□ -0.29
LINC01238-204ENST00000451070 TOMM70O94826 608 aa13.23□□□□□ -0.29
LINC01238-204ENST00000451070 PRELPP51888 382 aa13.23□□□□□ -0.29
LINC01238-204ENST00000451070 RASSF7Q02833 373 aa13.23□□□□□ -0.29
LINC01238-204ENST00000451070 MCM10Q7L590 875 aa13.23□□□□□ -0.29
LINC01238-204ENST00000451070 USP16Q9Y5T5 823 aa13.23□□□□□ -0.29
LINC01238-204ENST00000451070 DLG5Q8TDM6 1919 aa13.22□□□□□ -0.29
LINC01238-204ENST00000451070 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
LINC01238-204ENST00000451070 CAMTA2O94983 1202 aa13.22□□□□□ -0.29
LINC01238-204ENST00000451070 C2CD5Q86YS7 1000 aa13.22□□□□□ -0.29
LINC01238-204ENST00000451070 TTLL6Q8N841 843 aa13.22□□□□□ -0.29
LINC01238-204ENST00000451070 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
LINC01238-204ENST00000451070 TNRC6CQ9HCJ0 1690 aaKnown RBP13.21□□□□□ -0.29
LINC01238-204ENST00000451070 PIP4K2AP48426 406 aaPredicted RBP13.21□□□□□ -0.29
LINC01238-204ENST00000451070 DCTN1Q14203 1278 aa13.21□□□□□ -0.29
LINC01238-204ENST00000451070 PRR5LQ6MZQ0 368 aa13.21□□□□□ -0.29
LINC01238-204ENST00000451070 H0YIN7 160 aa13.2□□□□□ -0.3
LINC01238-204ENST00000451070 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
LINC01238-204ENST00000451070 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
LINC01238-204ENST00000451070 TIAM2Q8IVF5 1701 aa13.19□□□□□ -0.3
LINC01238-204ENST00000451070 CACNA1SQ13698 1873 aa13.19□□□□□ -0.3
LINC01238-204ENST00000451070 FER1L6Q2WGJ9 1857 aa13.19□□□□□ -0.3
LINC01238-204ENST00000451070 NFKBIEO00221 500 aa13.19□□□□□ -0.3
LINC01238-204ENST00000451070 HTATSF1O43719 755 aaKnown RBP13.19□□□□□ -0.3
LINC01238-204ENST00000451070 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
LINC01238-204ENST00000451070 LMNB1P20700 586 aa13.19□□□□□ -0.3
LINC01238-204ENST00000451070 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
LINC01238-204ENST00000451070 RBM46Q8TBY0 533 aaKnown RBP13.19□□□□□ -0.3
LINC01238-204ENST00000451070 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
LINC01238-204ENST00000451070 BRIP1Q9BX63 1249 aa13.19□□□□□ -0.3
LINC01238-204ENST00000451070 KDM2BQ8NHM5 1336 aa13.18□□□□□ -0.3
LINC01238-204ENST00000451070 KDM3BQ7LBC6 1761 aa13.18□□□□□ -0.3
LINC01238-204ENST00000451070 DICER1Q9UPY3 1922 aaKnown RBP13.18□□□□□ -0.3
LINC01238-204ENST00000451070 APLP1P51693 650 aa13.18□□□□□ -0.3
LINC01238-204ENST00000451070 SETDB2Q96T68 719 aa13.18□□□□□ -0.3
LINC01238-204ENST00000451070 RRAGCQ9HB90 399 aa13.18□□□□□ -0.3
LINC01238-204ENST00000451070 SLX4Q8IY92 1834 aa13.18□□□□□ -0.3
LINC01238-204ENST00000451070 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
LINC01238-204ENST00000451070 ARFGEF2Q9Y6D5 1785 aa13.17□□□□□ -0.3
LINC01238-204ENST00000451070 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
LINC01238-204ENST00000451070 WDR90Q96KV7 1748 aa13.17□□□□□ -0.3
LINC01238-204ENST00000451070 NBPF26B4DH59 902 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms